RNA–Protein interactions for RNA: ENST00000466442.6

CARS-208, Transcript of cysteinyl-tRNA synthetase, humanhuman

TSL 2

Gene CARS, Length 2,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARS-208ENST00000466442 NISCHQ9Y2I1 1504 aa35.99■■■■□ 3.35
CARS-208ENST00000466442 CCDC180Q9P1Z9 1646 aa31.58■■■□□ 2.65
CARS-208ENST00000466442 SHROOM4Q9ULL8 1493 aa30.85■■■□□ 2.53
CARS-208ENST00000466442 SUPT5HO00267 1087 aaKnown RBP30.4■■■□□ 2.46
CARS-208ENST00000466442 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
CARS-208ENST00000466442 DCAF1Q9Y4B6 1507 aa29.9■■■□□ 2.38
CARS-208ENST00000466442 DCAF8L2P0C7V8 631 aa29.75■■■□□ 2.35
CARS-208ENST00000466442 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
CARS-208ENST00000466442 ABCC9O60706 1549 aa29.64■■■□□ 2.34
CARS-208ENST00000466442 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
CARS-208ENST00000466442 NACADO15069 1562 aa29.37■■■□□ 2.29
CARS-208ENST00000466442 HRCP23327 699 aa29.25■■■□□ 2.27
CARS-208ENST00000466442 RB1CC1Q8TDY2 1594 aa29.1■■■□□ 2.25
CARS-208ENST00000466442 PCGF6Q9BYE7 350 aa29.07■■■□□ 2.24
CARS-208ENST00000466442 LOC105371045A0A1W2PR82 267 aa28.83■■■□□ 2.21
CARS-208ENST00000466442 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
CARS-208ENST00000466442 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
CARS-208ENST00000466442 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
CARS-208ENST00000466442 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
CARS-208ENST00000466442 TRIM26Q12899 539 aaPredicted RBP28.43■■■□□ 2.14
CARS-208ENST00000466442 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
CARS-208ENST00000466442 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.11
CARS-208ENST00000466442 FAM9AQ8IZU1 332 aaPredicted RBP28.09■■■□□ 2.09
CARS-208ENST00000466442 CECR2Q9BXF3 1484 aa27.97■■■□□ 2.07
CARS-208ENST00000466442 ZEB1P37275 1124 aaPredicted RBP27.93■■■□□ 2.06
CARS-208ENST00000466442 MROH2BQ7Z745 1585 aa27.89■■■□□ 2.06
CARS-208ENST00000466442 EHMT2Q96KQ7 1210 aa27.86■■■□□ 2.05
CARS-208ENST00000466442 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
CARS-208ENST00000466442 BAZ1AQ9NRL2 1556 aaPredicted RBP27.8■■■□□ 2.04
CARS-208ENST00000466442 WIZO95785 1651 aa27.74■■■□□ 2.03
CARS-208ENST00000466442 SMARCA4P51532 1647 aa27.7■■■□□ 2.02
CARS-208ENST00000466442 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
CARS-208ENST00000466442 EIF4G1Q04637 1599 aaKnown RBP27.46■■□□□ 1.99
CARS-208ENST00000466442 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
CARS-208ENST00000466442 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
CARS-208ENST00000466442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.26■■□□□ 1.95
CARS-208ENST00000466442 ABCC8Q09428 1581 aa27.25■■□□□ 1.95
CARS-208ENST00000466442 ATAD2BQ9ULI0 1458 aa27.23■■□□□ 1.95
CARS-208ENST00000466442 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
CARS-208ENST00000466442 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
CARS-208ENST00000466442 SCAF1Q9H7N4 1312 aaKnown RBP27.12■■□□□ 1.93
CARS-208ENST00000466442 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
CARS-208ENST00000466442 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
CARS-208ENST00000466442 SOGA1O94964 1423 aa27.08■■□□□ 1.93
CARS-208ENST00000466442 NCAPD3P42695 1498 aa27.07■■□□□ 1.92
CARS-208ENST00000466442 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
CARS-208ENST00000466442 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
CARS-208ENST00000466442 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
CARS-208ENST00000466442 TNIKQ9UKE5 1360 aa27.02■■□□□ 1.92
CARS-208ENST00000466442 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
CARS-208ENST00000466442 EEA1Q15075 1411 aa26.96■■□□□ 1.91
CARS-208ENST00000466442 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
CARS-208ENST00000466442 RUSC2Q8N2Y8 1516 aa26.92■■□□□ 1.9
CARS-208ENST00000466442 UBTFP17480 764 aaKnown RBP26.92■■□□□ 1.9
CARS-208ENST00000466442 PELP1Q8IZL8 1130 aaKnown RBP26.87■■□□□ 1.89
CARS-208ENST00000466442 DIEXFQ68CQ4 756 aaKnown RBP26.82■■□□□ 1.88
CARS-208ENST00000466442 GOLGA3Q08378 1498 aa26.81■■□□□ 1.88
CARS-208ENST00000466442 ACIN1Q9UKV3 1341 aaKnown RBP26.79■■□□□ 1.88
CARS-208ENST00000466442 NEUROD1Q13562 356 aa26.73■■□□□ 1.87
CARS-208ENST00000466442 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
CARS-208ENST00000466442 SYNJ1O43426 1573 aa26.6■■□□□ 1.85
CARS-208ENST00000466442 CENPBP07199 599 aaPredicted RBP26.59■■□□□ 1.85
CARS-208ENST00000466442 ZNF316A6NFI3 1004 aaPredicted RBP26.55■■□□□ 1.84
CARS-208ENST00000466442 KIF21BO75037 1637 aa26.54■■□□□ 1.84
CARS-208ENST00000466442 CLIP1P30622 1438 aa26.53■■□□□ 1.84
CARS-208ENST00000466442 HNRNPUL2Q1KMD3 747 aaKnown RBP26.49■■□□□ 1.83
CARS-208ENST00000466442 GTF3C3Q9Y5Q9 886 aa26.49■■□□□ 1.83
CARS-208ENST00000466442 VPS8Q8N3P4 1428 aa26.44■■□□□ 1.82
CARS-208ENST00000466442 PRDM2Q13029 1718 aa26.43■■□□□ 1.82
CARS-208ENST00000466442 CFTRP13569 1480 aa26.42■■□□□ 1.82
CARS-208ENST00000466442 RAPGEF2Q9Y4G8 1499 aa26.4■■□□□ 1.82
CARS-208ENST00000466442 APLP2Q06481 763 aa26.38■■□□□ 1.81
CARS-208ENST00000466442 RANGAP1P46060 587 aaPredicted RBP26.33■■□□□ 1.81
CARS-208ENST00000466442 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
CARS-208ENST00000466442 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
CARS-208ENST00000466442 TOP2BQ02880 1626 aa26.23■■□□□ 1.79
CARS-208ENST00000466442 YTHDC1Q96MU7 727 aaKnown RBP26.22■■□□□ 1.79
CARS-208ENST00000466442 MIER1Q8N108 512 aa26.21■■□□□ 1.79
CARS-208ENST00000466442 LAMC3Q9Y6N6 1575 aa26.19■■□□□ 1.78
CARS-208ENST00000466442 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
CARS-208ENST00000466442 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
CARS-208ENST00000466442 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
CARS-208ENST00000466442 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
CARS-208ENST00000466442 NESP48681 1621 aa26.03■■□□□ 1.76
CARS-208ENST00000466442 CLSPNQ9HAW4 1339 aa25.99■■□□□ 1.75
CARS-208ENST00000466442 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
CARS-208ENST00000466442 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
CARS-208ENST00000466442 DHX57Q6P158 1386 aaKnown RBP25.98■■□□□ 1.75
CARS-208ENST00000466442 CUX1P39880 1505 aa25.97■■□□□ 1.75
CARS-208ENST00000466442 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
CARS-208ENST00000466442 PDS5BQ9NTI5 1447 aa25.89■■□□□ 1.73
CARS-208ENST00000466442 RRBP1Q9P2E9 1410 aaKnown RBP25.86■■□□□ 1.73
CARS-208ENST00000466442 KIF21AQ7Z4S6 1674 aa25.84■■□□□ 1.73
CARS-208ENST00000466442 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
CARS-208ENST00000466442 ARHGAP35Q9NRY4 1499 aa25.78■■□□□ 1.72
CARS-208ENST00000466442 CCNB3Q8WWL7 1395 aa25.76■■□□□ 1.71
CARS-208ENST00000466442 MYT1Q01538 1121 aa25.75■■□□□ 1.71
CARS-208ENST00000466442 CUX2O14529 1486 aa25.73■■□□□ 1.71
CARS-208ENST00000466442 TOPBP1Q92547 1522 aa25.72■■□□□ 1.71
CARS-208ENST00000466442 URB2Q14146 1524 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms