RNA–Protein interactions for RNA: ENST00000466405.1

WDR48-208, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 4,925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-208ENST00000466405 NISCHQ9Y2I1 1504 aa10.82□□□□□ -0.68
WDR48-208ENST00000466405 PELP1Q8IZL8 1130 aaKnown RBP10.79□□□□□ -0.68
WDR48-208ENST00000466405 SUPT5HO00267 1087 aaKnown RBP10.69□□□□□ -0.7
WDR48-208ENST00000466405 PCGF6Q9BYE7 350 aa10.6□□□□□ -0.71
WDR48-208ENST00000466405 MYT1Q01538 1121 aa10.58□□□□□ -0.72
WDR48-208ENST00000466405 HRCP23327 699 aa10.51□□□□□ -0.73
WDR48-208ENST00000466405 SHROOM4Q9ULL8 1493 aa10.47□□□□□ -0.73
WDR48-208ENST00000466405 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
WDR48-208ENST00000466405 ZEB1P37275 1124 aaPredicted RBP10.33□□□□□ -0.76
WDR48-208ENST00000466405 CENPBP07199 599 aaPredicted RBP10.31□□□□□ -0.76
WDR48-208ENST00000466405 PPARGC1BQ86YN6 1023 aaKnown RBP10.29□□□□□ -0.76
WDR48-208ENST00000466405 EHMT2Q96KQ7 1210 aa10.16□□□□□ -0.78
WDR48-208ENST00000466405 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
WDR48-208ENST00000466405 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
WDR48-208ENST00000466405 YTHDC1Q96MU7 727 aaKnown RBP10.03□□□□□ -0.8
WDR48-208ENST00000466405 FAM9AQ8IZU1 332 aaPredicted RBP10.01□□□□□ -0.81
WDR48-208ENST00000466405 CHIC1Q5VXU3 224 aa9.98□□□□□ -0.81
WDR48-208ENST00000466405 ERICH6Q7L0X2 663 aa9.94□□□□□ -0.82
WDR48-208ENST00000466405 GTF3C3Q9Y5Q9 886 aa9.93□□□□□ -0.82
WDR48-208ENST00000466405 TTBK1Q5TCY1 1321 aaPredicted RBP9.92□□□□□ -0.82
WDR48-208ENST00000466405 LOC105371045A0A1W2PR82 267 aa9.92□□□□□ -0.82
WDR48-208ENST00000466405 SCAF1Q9H7N4 1312 aaKnown RBP9.87□□□□□ -0.83
WDR48-208ENST00000466405 ACIN1Q9UKV3 1341 aaKnown RBP9.87□□□□□ -0.83
WDR48-208ENST00000466405 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
WDR48-208ENST00000466405 DIEXFQ68CQ4 756 aaKnown RBP9.84□□□□□ -0.83
WDR48-208ENST00000466405 APLP2Q06481 763 aa9.78□□□□□ -0.84
WDR48-208ENST00000466405 NEFLP07196 543 aa9.76□□□□□ -0.85
WDR48-208ENST00000466405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
WDR48-208ENST00000466405 NEUROD1Q13562 356 aa9.7□□□□□ -0.86
WDR48-208ENST00000466405 DCAF1Q9Y4B6 1507 aa9.65□□□□□ -0.86
WDR48-208ENST00000466405 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
WDR48-208ENST00000466405 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
WDR48-208ENST00000466405 MYO15BQ96JP2 1530 aa9.54□□□□□ -0.88
WDR48-208ENST00000466405 BCANQ96GW7 911 aa9.52□□□□□ -0.89
WDR48-208ENST00000466405 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
WDR48-208ENST00000466405 RANGAP1P46060 587 aaPredicted RBP9.51□□□□□ -0.89
WDR48-208ENST00000466405 CLSPNQ9HAW4 1339 aa9.46□□□□□ -0.89
WDR48-208ENST00000466405 RTL5Q5HYW3 569 aaPredicted RBP9.44□□□□□ -0.9
WDR48-208ENST00000466405 ANP32EQ9BTT0 268 aa9.44□□□□□ -0.9
WDR48-208ENST00000466405 CCDC180Q9P1Z9 1646 aa9.42□□□□□ -0.9
WDR48-208ENST00000466405 BCL11AQ9H165 835 aa9.42□□□□□ -0.9
WDR48-208ENST00000466405 CDK11AQ9UQ88 783 aaPredicted RBP9.37□□□□□ -0.91
WDR48-208ENST00000466405 MIER1Q8N108 512 aa9.36□□□□□ -0.91
WDR48-208ENST00000466405 FKBP8Q14318 412 aa9.32□□□□□ -0.92
WDR48-208ENST00000466405 ITGAEP38570 1179 aa9.31□□□□□ -0.92
WDR48-208ENST00000466405 DAXXQ9UER7 740 aaPredicted RBP9.31□□□□□ -0.92
WDR48-208ENST00000466405 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
WDR48-208ENST00000466405 ATP1B4Q9UN42 357 aaPredicted RBP9.25□□□□□ -0.93
WDR48-208ENST00000466405 ANP32CO43423 234 aa9.23□□□□□ -0.93
WDR48-208ENST00000466405 SUPT16HQ9Y5B9 1047 aaKnown RBP9.23□□□□□ -0.93
WDR48-208ENST00000466405 EIF5BO60841 1220 aaKnown RBP9.2□□□□□ -0.94
WDR48-208ENST00000466405 CSRNP3Q8WYN3 585 aa9.2□□□□□ -0.94
WDR48-208ENST00000466405 ANP32AP39687 249 aaKnown RBP9.18□□□□□ -0.94
WDR48-208ENST00000466405 NBR1Q14596 966 aa9.17□□□□□ -0.94
WDR48-208ENST00000466405 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
WDR48-208ENST00000466405 CNGB1Q14028 1251 aaPredicted RBP9.13□□□□□ -0.95
WDR48-208ENST00000466405 POLR3GLQ9BT43 218 aa9.12□□□□□ -0.95
WDR48-208ENST00000466405 TRIM52Q96A61 297 aa9.11□□□□□ -0.95
WDR48-208ENST00000466405 ZCCHC6Q5VYS8 1495 aaKnown RBP9.1□□□□□ -0.95
WDR48-208ENST00000466405 DDX10Q13206 875 aaKnown RBP9.1□□□□□ -0.95
WDR48-208ENST00000466405 RBM19Q9Y4C8 960 aaKnown RBP9.08□□□□□ -0.96
WDR48-208ENST00000466405 NPM2Q86SE8 214 aaKnown RBP9.08□□□□□ -0.96
WDR48-208ENST00000466405 HNRNPUQ00839 825 aaKnown RBP eCLIP9.07□□□□□ -0.96
WDR48-208ENST00000466405 ZBTB47Q9UFB7 747 aaPredicted RBP9.07□□□□□ -0.96
WDR48-208ENST00000466405 GLIPR1L2Q4G1C9 344 aa9.06□□□□□ -0.96
WDR48-208ENST00000466405 IRX6P78412 446 aaPredicted RBP9.05□□□□□ -0.96
WDR48-208ENST00000466405 DEKP35659 375 aaKnown RBP9.05□□□□□ -0.96
WDR48-208ENST00000466405 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
WDR48-208ENST00000466405 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
WDR48-208ENST00000466405 CCDC136Q96JN2 1154 aa8.97□□□□□ -0.97
WDR48-208ENST00000466405 NOP58Q9Y2X3 529 aaKnown RBP8.97□□□□□ -0.97
WDR48-208ENST00000466405 CEP162Q5TB80 1403 aa8.94□□□□□ -0.98
WDR48-208ENST00000466405 FAM9BQ8IZU0 186 aa8.94□□□□□ -0.98
WDR48-208ENST00000466405 HIRIP3Q9BW71 556 aaPredicted RBP8.92□□□□□ -0.98
WDR48-208ENST00000466405 PPP4R2Q9NY27 417 aa8.91□□□□□ -0.98
WDR48-208ENST00000466405 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
WDR48-208ENST00000466405 NEFMP07197 916 aa8.9□□□□□ -0.98
WDR48-208ENST00000466405 TONSLQ96HA7 1378 aa8.9□□□□□ -0.99
WDR48-208ENST00000466405 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.88□□□□□ -0.99
WDR48-208ENST00000466405 ERICH6BQ5W0A0 696 aa8.87□□□□□ -0.99
WDR48-208ENST00000466405 MRS2Q9HD23 443 aa8.86□□□□□ -0.99
WDR48-208ENST00000466405 PPM1GO15355 546 aaPredicted RBP8.86□□□□□ -0.99
WDR48-208ENST00000466405 LAS1LQ9Y4W2 734 aaKnown RBP8.86□□□□□ -0.99
WDR48-208ENST00000466405 B4GALNT3Q6L9W6 998 aa8.85□□□□□ -0.99
WDR48-208ENST00000466405 TNIKQ9UKE5 1360 aa8.85□□□□□ -0.99
WDR48-208ENST00000466405 CLIP1P30622 1438 aa8.84□□□□□ -0.99
WDR48-208ENST00000466405 RSF1Q96T23 1441 aaPredicted RBP8.84□□□□□ -0.99
WDR48-208ENST00000466405 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
WDR48-208ENST00000466405 ZNF326Q5BKZ1 582 aaKnown RBP8.82□□□□□ -1
WDR48-208ENST00000466405 FANCIQ9NVI1 1328 aa8.82□□□□□ -1
WDR48-208ENST00000466405 CCER2I3L3R5 266 aa8.82□□□□□ -1
WDR48-208ENST00000466405 ARXQ96QS3 562 aa8.82□□□□□ -1
WDR48-208ENST00000466405 GOLGA3Q08378 1498 aa8.8□□□□□ -1
WDR48-208ENST00000466405 KCNH8Q96L42 1107 aa8.78□□□□□ -1
WDR48-208ENST00000466405 EEA1Q15075 1411 aa8.78□□□□□ -1
WDR48-208ENST00000466405 ANO8Q9HCE9 1232 aaPredicted RBP8.77□□□□□ -1.01
WDR48-208ENST00000466405 SCRIBQ14160 1630 aa8.77□□□□□ -1.01
WDR48-208ENST00000466405 ANP32BQ92688 251 aaKnown RBP8.77□□□□□ -1.01
WDR48-208ENST00000466405 SALL2Q9Y467 1007 aaPredicted RBP8.77□□□□□ -1.01
WDR48-208ENST00000466405 NAP1L5Q96NT1 182 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms