RNA–Protein interactions for RNA: ENST00000466367.5

ARRDC1-205, Transcript of arrestin domain containing 1, humanhuman

TSL 1 (best)

Gene ARRDC1, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-205ENST00000466367 NISCHQ9Y2I1 1504 aa53.23■■■■■ 6.11
ARRDC1-205ENST00000466367 ABCC9O60706 1549 aa48.02■■■■■ 5.28
ARRDC1-205ENST00000466367 CCDC180Q9P1Z9 1646 aa47.85■■■■■ 5.25
ARRDC1-205ENST00000466367 RB1CC1Q8TDY2 1594 aa45.6■■■■■ 4.89
ARRDC1-205ENST00000466367 NACADO15069 1562 aa45.24■■■■■ 4.83
ARRDC1-205ENST00000466367 DNAJC5BQ9UF47 199 aa45.12■■■■■ 4.81
ARRDC1-205ENST00000466367 DCAF8L2P0C7V8 631 aa45■■■■■ 4.79
ARRDC1-205ENST00000466367 PABPN1Q86U42 306 aaKnown RBP eCLIP44.66■■■■■ 4.74
ARRDC1-205ENST00000466367 UNC13AQ9UPW8 1703 aa44.63■■■■■ 4.73
ARRDC1-205ENST00000466367 MYO15BQ96JP2 1530 aa44.52■■■■■ 4.72
ARRDC1-205ENST00000466367 BICRAQ9NZM4 1560 aa44.31■■■■■ 4.68
ARRDC1-205ENST00000466367 ZCCHC6Q5VYS8 1495 aaKnown RBP44.11■■■■■ 4.65
ARRDC1-205ENST00000466367 DCAF1Q9Y4B6 1507 aa43.92■■■■■ 4.62
ARRDC1-205ENST00000466367 SCRIBQ14160 1630 aa43.66■■■■■ 4.58
ARRDC1-205ENST00000466367 SHROOM4Q9ULL8 1493 aa43.62■■■■■ 4.57
ARRDC1-205ENST00000466367 CC2D2AQ9P2K1 1620 aa43.36■■■■■ 4.53
ARRDC1-205ENST00000466367 CECR2Q9BXF3 1484 aa43.24■■■■■ 4.51
ARRDC1-205ENST00000466367 EIF4G1Q04637 1599 aaKnown RBP43.22■■■■■ 4.51
ARRDC1-205ENST00000466367 NCAPD3P42695 1498 aa41.74■■■■■ 4.27
ARRDC1-205ENST00000466367 ATAD2BQ9ULI0 1458 aa41.63■■■■■ 4.25
ARRDC1-205ENST00000466367 SMARCA4P51532 1647 aa41.59■■■■■ 4.25
ARRDC1-205ENST00000466367 SMARCA2P51531 1590 aa41.5■■■■■ 4.23
ARRDC1-205ENST00000466367 DNAJC5Q9H3Z4 198 aa41.49■■■■■ 4.23
ARRDC1-205ENST00000466367 HMGXB3Q12766 1538 aa41.46■■■■■ 4.23
ARRDC1-205ENST00000466367 ERCC6Q03468 1493 aa41.46■■■■■ 4.23
ARRDC1-205ENST00000466367 CUX2O14529 1486 aa41.39■■■■■ 4.22
ARRDC1-205ENST00000466367 BAZ1AQ9NRL2 1556 aaPredicted RBP41.33■■■■■ 4.21
ARRDC1-205ENST00000466367 BAZ1BQ9UIG0 1483 aaKnown RBP41.24■■■■■ 4.19
ARRDC1-205ENST00000466367 NESP48681 1621 aa41.22■■■■■ 4.19
ARRDC1-205ENST00000466367 PEG3Q9GZU2 1588 aa41.14■■■■■ 4.18
ARRDC1-205ENST00000466367 MROH2BQ7Z745 1585 aa41.05■■■■■ 4.16
ARRDC1-205ENST00000466367 LAMC3Q9Y6N6 1575 aa40.86■■■■■ 4.13
ARRDC1-205ENST00000466367 THOC2Q8NI27 1593 aaKnown RBP40.83■■■■■ 4.13
ARRDC1-205ENST00000466367 KIF21AQ7Z4S6 1674 aa40.7■■■■■ 4.11
ARRDC1-205ENST00000466367 PDS5BQ9NTI5 1447 aa40.59■■■■■ 4.09
ARRDC1-205ENST00000466367 WIZO95785 1651 aa40.57■■■■■ 4.09
ARRDC1-205ENST00000466367 CADPSQ9ULU8 1353 aa40.48■■■■■ 4.07
ARRDC1-205ENST00000466367 MRC2Q9UBG0 1479 aa40.31■■■■■ 4.04
ARRDC1-205ENST00000466367 WDR62O43379 1518 aa40.21■■■■■ 4.03
ARRDC1-205ENST00000466367 CEP164Q9UPV0 1460 aa40.13■■■■■ 4.01
ARRDC1-205ENST00000466367 RSF1Q96T23 1441 aaPredicted RBP40.12■■■■■ 4.01
ARRDC1-205ENST00000466367 FANCD2Q9BXW9 1451 aa40.06■■■■■ 4
ARRDC1-205ENST00000466367 TOP2AP11388 1531 aaKnown RBP40.02■■■■■ 4
ARRDC1-205ENST00000466367 CFTRP13569 1480 aa40■■■■□ 3.99
ARRDC1-205ENST00000466367 URB2Q14146 1524 aaKnown RBP39.75■■■■□ 3.95
ARRDC1-205ENST00000466367 TRIM41Q8WV44 630 aa39.7■■■■□ 3.95
ARRDC1-205ENST00000466367 PRDM2Q13029 1718 aa39.65■■■■□ 3.94
ARRDC1-205ENST00000466367 CCDC88BA6NC98 1476 aa39.56■■■■□ 3.92
ARRDC1-205ENST00000466367 OSCARQ8IYS5 282 aa39.44■■■■□ 3.9
ARRDC1-205ENST00000466367 IFT140Q96RY7 1462 aa39.3■■■■□ 3.88
ARRDC1-205ENST00000466367 TOPBP1Q92547 1522 aa39.3■■■■□ 3.88
ARRDC1-205ENST00000466367 ZNF608Q9ULD9 1512 aaPredicted RBP39.3■■■■□ 3.88
ARRDC1-205ENST00000466367 DNMBPQ6XZF7 1577 aa39.14■■■■□ 3.86
ARRDC1-205ENST00000466367 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
ARRDC1-205ENST00000466367 EIF4G3O43432 1585 aaKnown RBP39.09■■■■□ 3.85
ARRDC1-205ENST00000466367 RIMBP3CA6NJZ7 1639 aa39.03■■■■□ 3.84
ARRDC1-205ENST00000466367 RIMBP3BA6NNM3 1639 aa39.03■■■■□ 3.84
ARRDC1-205ENST00000466367 RIMBP3Q9UFD9 1639 aa39.03■■■■□ 3.84
ARRDC1-205ENST00000466367 TARBP1Q13395 1621 aaKnown RBP38.96■■■■□ 3.83
ARRDC1-205ENST00000466367 AQRO60306 1485 aaKnown RBP eCLIP38.9■■■■□ 3.822e-10■■■■■ 40
ARRDC1-205ENST00000466367 ARHGEF11O15085 1522 aa38.89■■■■□ 3.82
ARRDC1-205ENST00000466367 POLA1P09884 1462 aaPredicted RBP38.88■■■■□ 3.81
ARRDC1-205ENST00000466367 CHD1O14646 1710 aa38.84■■■■□ 3.81
ARRDC1-205ENST00000466367 RAD54L2Q9Y4B4 1467 aa38.76■■■■□ 3.8
ARRDC1-205ENST00000466367 SOGA1O94964 1423 aa38.68■■■■□ 3.78
ARRDC1-205ENST00000466367 FBLN2P98095 1184 aa38.67■■■■□ 3.78
ARRDC1-205ENST00000466367 TDRD9Q8NDG6 1382 aaKnown RBP38.64■■■■□ 3.78
ARRDC1-205ENST00000466367 FGD5Q6ZNL6 1462 aa38.64■■■■□ 3.78
ARRDC1-205ENST00000466367 CUX1P39880 1505 aa38.58■■■■□ 3.77
ARRDC1-205ENST00000466367 CYB5RLQ6IPT4 315 aa38.57■■■■□ 3.76
ARRDC1-205ENST00000466367 SNAPC4Q5SXM2 1469 aa38.53■■■■□ 3.76
ARRDC1-205ENST00000466367 WDR97A6NE52 1622 aa38.5■■■■□ 3.75
ARRDC1-205ENST00000466367 ARAP1Q96P48 1450 aa38.5■■■■□ 3.75
ARRDC1-205ENST00000466367 MAGI1Q96QZ7 1491 aaPredicted RBP38.37■■■■□ 3.73
ARRDC1-205ENST00000466367 GRIN2BQ13224 1484 aa38.36■■■■□ 3.73
ARRDC1-205ENST00000466367 CLASP1Q7Z460 1538 aa38.35■■■■□ 3.73
ARRDC1-205ENST00000466367 CHMP7Q8WUX9 453 aaPredicted RBP38.33■■■■□ 3.73
ARRDC1-205ENST00000466367 SYNJ1O43426 1573 aa38.31■■■■□ 3.72
ARRDC1-205ENST00000466367 SUPT5HO00267 1087 aaKnown RBP38.27■■■■□ 3.72
ARRDC1-205ENST00000466367 PBRM1Q86U86 1689 aa38.27■■■■□ 3.72
ARRDC1-205ENST00000466367 SYNJ2O15056 1496 aa38.26■■■■□ 3.72
ARRDC1-205ENST00000466367 GAPVD1Q14C86 1478 aa38.22■■■■□ 3.71
ARRDC1-205ENST00000466367 TRHP20396 242 aaPredicted RBP38.2■■■■□ 3.71
ARRDC1-205ENST00000466367 ABCA10Q8WWZ4 1543 aa38.16■■■■□ 3.7
ARRDC1-205ENST00000466367 ABCA5Q8WWZ7 1642 aa38.15■■■■□ 3.7
ARRDC1-205ENST00000466367 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.67
ARRDC1-205ENST00000466367 BIVM-ERCC5R4GMW8 1640 aa37.92■■■■□ 3.66
ARRDC1-205ENST00000466367 TOP2BQ02880 1626 aa37.9■■■■□ 3.66
ARRDC1-205ENST00000466367 GRIN2AQ12879 1464 aa37.89■■■■□ 3.66
ARRDC1-205ENST00000466367 ADAMTS12P58397 1594 aa37.89■■■■□ 3.66
ARRDC1-205ENST00000466367 CEP170Q5SW79 1584 aa37.79■■■■□ 3.64
ARRDC1-205ENST00000466367 ERCC6L2Q5T890 1561 aa37.79■■■■□ 3.64
ARRDC1-205ENST00000466367 NUP160Q12769 1436 aa37.75■■■■□ 3.63
ARRDC1-205ENST00000466367 FHAD1B1AJZ9 1412 aa37.71■■■■□ 3.63
ARRDC1-205ENST00000466367 ERICH3Q5RHP9 1530 aa37.66■■■■□ 3.62
ARRDC1-205ENST00000466367 SHROOM2Q13796 1616 aa37.61■■■■□ 3.61
ARRDC1-205ENST00000466367 PRG4Q92954 1404 aaPredicted RBP37.41■■■■□ 3.58
ARRDC1-205ENST00000466367 RUSC2Q8N2Y8 1516 aa37.36■■■■□ 3.57
ARRDC1-205ENST00000466367 JPH4Q96JJ6 628 aa37.33■■■■□ 3.57
ARRDC1-205ENST00000466367 KIF13AQ9H1H9 1805 aa37.2■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms