RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
SCAP-209ENST00000465628 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
SCAP-209ENST00000465628 ABCC9O60706 1549 aa33.62■■■□□ 2.97
SCAP-209ENST00000465628 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
SCAP-209ENST00000465628 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
SCAP-209ENST00000465628 NACADO15069 1562 aa32.07■■■□□ 2.72
SCAP-209ENST00000465628 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
SCAP-209ENST00000465628 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.66
SCAP-209ENST00000465628 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
SCAP-209ENST00000465628 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
SCAP-209ENST00000465628 PABPN1Q86U42 306 aaKnown RBP eCLIP31.32■■■□□ 2.6
SCAP-209ENST00000465628 BICRAQ9NZM4 1560 aa31.16■■■□□ 2.58
SCAP-209ENST00000465628 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
SCAP-209ENST00000465628 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
SCAP-209ENST00000465628 SHROOM4Q9ULL8 1493 aa30.83■■■□□ 2.53
SCAP-209ENST00000465628 EIF4G1Q04637 1599 aaKnown RBP30.42■■■□□ 2.46
SCAP-209ENST00000465628 CC2D2AQ9P2K1 1620 aa30.38■■■□□ 2.45
SCAP-209ENST00000465628 CECR2Q9BXF3 1484 aa30.22■■■□□ 2.43
SCAP-209ENST00000465628 SMARCA4P51532 1647 aa29.7■■■□□ 2.34
SCAP-209ENST00000465628 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
SCAP-209ENST00000465628 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
SCAP-209ENST00000465628 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
SCAP-209ENST00000465628 NCAPD3P42695 1498 aa29.51■■■□□ 2.31
SCAP-209ENST00000465628 HMGXB3Q12766 1538 aa29.43■■■□□ 2.3
SCAP-209ENST00000465628 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.29
SCAP-209ENST00000465628 BAZ1BQ9UIG0 1483 aaKnown RBP29.37■■■□□ 2.29
SCAP-209ENST00000465628 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
SCAP-209ENST00000465628 WIZO95785 1651 aa29.1■■■□□ 2.25
SCAP-209ENST00000465628 ERCC6Q03468 1493 aa29.07■■■□□ 2.24
SCAP-209ENST00000465628 NESP48681 1621 aa28.98■■■□□ 2.23
SCAP-209ENST00000465628 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
SCAP-209ENST00000465628 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
SCAP-209ENST00000465628 TOP2AP11388 1531 aaKnown RBP28.78■■■□□ 2.2
SCAP-209ENST00000465628 CUX2O14529 1486 aa28.76■■■□□ 2.19
SCAP-209ENST00000465628 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
SCAP-209ENST00000465628 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
SCAP-209ENST00000465628 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
SCAP-209ENST00000465628 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
SCAP-209ENST00000465628 CFTRP13569 1480 aa28.45■■■□□ 2.14
SCAP-209ENST00000465628 CEP164Q9UPV0 1460 aa28.45■■■□□ 2.14
SCAP-209ENST00000465628 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
SCAP-209ENST00000465628 FANCD2Q9BXW9 1451 aa28.41■■■□□ 2.14
SCAP-209ENST00000465628 CCDC88BA6NC98 1476 aa28.38■■■□□ 2.13
SCAP-209ENST00000465628 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
SCAP-209ENST00000465628 WDR62O43379 1518 aa28.33■■■□□ 2.13
SCAP-209ENST00000465628 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
SCAP-209ENST00000465628 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
SCAP-209ENST00000465628 DNAJC5Q9H3Z4 198 aa28.08■■■□□ 2.09
SCAP-209ENST00000465628 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
SCAP-209ENST00000465628 DNMBPQ6XZF7 1577 aa27.89■■■□□ 2.05
SCAP-209ENST00000465628 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
SCAP-209ENST00000465628 IFT140Q96RY7 1462 aa27.81■■■□□ 2.04
SCAP-209ENST00000465628 ZNF608Q9ULD9 1512 aaPredicted RBP27.7■■■□□ 2.02
SCAP-209ENST00000465628 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
SCAP-209ENST00000465628 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
SCAP-209ENST00000465628 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
SCAP-209ENST00000465628 CUX1P39880 1505 aa27.61■■■□□ 2.01
SCAP-209ENST00000465628 FGD5Q6ZNL6 1462 aa27.58■■■□□ 2.01
SCAP-209ENST00000465628 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
SCAP-209ENST00000465628 SOGA1O94964 1423 aa27.52■■■□□ 2
SCAP-209ENST00000465628 AQRO60306 1485 aaKnown RBP eCLIP27.5■■□□□ 1.99
SCAP-209ENST00000465628 OSCARQ8IYS5 282 aa27.48■■□□□ 1.99
SCAP-209ENST00000465628 TDRD9Q8NDG6 1382 aaKnown RBP27.41■■□□□ 1.98
SCAP-209ENST00000465628 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
SCAP-209ENST00000465628 CHD1O14646 1710 aa27.37■■□□□ 1.97
SCAP-209ENST00000465628 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.97
SCAP-209ENST00000465628 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
SCAP-209ENST00000465628 FBLN2P98095 1184 aa27.32■■□□□ 1.96
SCAP-209ENST00000465628 SNAPC4Q5SXM2 1469 aa27.31■■□□□ 1.96
SCAP-209ENST00000465628 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
SCAP-209ENST00000465628 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
SCAP-209ENST00000465628 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
SCAP-209ENST00000465628 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
SCAP-209ENST00000465628 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.95
SCAP-209ENST00000465628 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
SCAP-209ENST00000465628 GAPVD1Q14C86 1478 aa27.24■■□□□ 1.95
SCAP-209ENST00000465628 MAGI1Q96QZ7 1491 aaPredicted RBP27.23■■□□□ 1.95
SCAP-209ENST00000465628 ABCA5Q8WWZ7 1642 aa27.21■■□□□ 1.95
SCAP-209ENST00000465628 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
SCAP-209ENST00000465628 RIMBP3CA6NJZ7 1639 aa27.14■■□□□ 1.94
SCAP-209ENST00000465628 RIMBP3BA6NNM3 1639 aa27.14■■□□□ 1.94
SCAP-209ENST00000465628 RIMBP3Q9UFD9 1639 aa27.14■■□□□ 1.94
SCAP-209ENST00000465628 SYNJ2O15056 1496 aa27.12■■□□□ 1.93
SCAP-209ENST00000465628 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
SCAP-209ENST00000465628 ADAMTS12P58397 1594 aa27.01■■□□□ 1.92
SCAP-209ENST00000465628 CLASP1Q7Z460 1538 aa26.98■■□□□ 1.91
SCAP-209ENST00000465628 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.9
SCAP-209ENST00000465628 GRIN2AQ12879 1464 aa26.92■■□□□ 1.9
SCAP-209ENST00000465628 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
SCAP-209ENST00000465628 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
SCAP-209ENST00000465628 ARAP1Q96P48 1450 aa26.84■■□□□ 1.89
SCAP-209ENST00000465628 KIF27Q86VH2 1401 aa26.81■■□□□ 1.88
SCAP-209ENST00000465628 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
SCAP-209ENST00000465628 NUP160Q12769 1436 aa26.76■■□□□ 1.87
SCAP-209ENST00000465628 CUL7Q14999 1698 aa26.71■■□□□ 1.87
SCAP-209ENST00000465628 RUSC2Q8N2Y8 1516 aa26.62■■□□□ 1.85
SCAP-209ENST00000465628 IGF1RP08069 1367 aa26.61■■□□□ 1.85
SCAP-209ENST00000465628 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
SCAP-209ENST00000465628 ERCC6L2Q5T890 1561 aa26.6■■□□□ 1.85
SCAP-209ENST00000465628 CARMIL1Q5VZK9 1371 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 1444.3 ms