RNA–Protein interactions for RNA: ENST00000465233.5

FAM213B-207, Transcript of Prostamide/prostaglandin F synthase, humanhuman

APPRIS ALT2 TSL 2

Gene FAM213B, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM213B-207ENST00000465233 NISCHQ9Y2I1 1504 aa51.1■■■■■ 5.77
FAM213B-207ENST00000465233 CCDC180Q9P1Z9 1646 aa45.92■■■■■ 4.94
FAM213B-207ENST00000465233 ABCC9O60706 1549 aa45.72■■■■■ 4.91
FAM213B-207ENST00000465233 RB1CC1Q8TDY2 1594 aa43.6■■■■■ 4.57
FAM213B-207ENST00000465233 NACADO15069 1562 aa43.33■■■■■ 4.53
FAM213B-207ENST00000465233 DCAF8L2P0C7V8 631 aa42.87■■■■■ 4.45
FAM213B-207ENST00000465233 DNAJC5BQ9UF47 199 aa42.79■■■■■ 4.44
FAM213B-207ENST00000465233 MYO15BQ96JP2 1530 aa42.79■■■■■ 4.44
FAM213B-207ENST00000465233 UNC13AQ9UPW8 1703 aa42.73■■■■■ 4.43
FAM213B-207ENST00000465233 PABPN1Q86U42 306 aaKnown RBP eCLIP42.48■■■■■ 4.39
FAM213B-207ENST00000465233 ZCCHC6Q5VYS8 1495 aaKnown RBP42.4■■■■■ 4.38
FAM213B-207ENST00000465233 BICRAQ9NZM4 1560 aa42.38■■■■■ 4.37
FAM213B-207ENST00000465233 DCAF1Q9Y4B6 1507 aa42.26■■■■■ 4.36
FAM213B-207ENST00000465233 SHROOM4Q9ULL8 1493 aa41.82■■■■■ 4.29
FAM213B-207ENST00000465233 SCRIBQ14160 1630 aa41.77■■■■■ 4.28
FAM213B-207ENST00000465233 CC2D2AQ9P2K1 1620 aa41.36■■■■■ 4.21
FAM213B-207ENST00000465233 EIF4G1Q04637 1599 aaKnown RBP41.3■■■■■ 4.2
FAM213B-207ENST00000465233 CECR2Q9BXF3 1484 aa41.18■■■■■ 4.18
FAM213B-207ENST00000465233 NCAPD3P42695 1498 aa39.98■■■■□ 3.99
FAM213B-207ENST00000465233 SMARCA4P51532 1647 aa39.88■■■■□ 3.97
FAM213B-207ENST00000465233 ATAD2BQ9ULI0 1458 aa39.86■■■■□ 3.97
FAM213B-207ENST00000465233 SMARCA2P51531 1590 aa39.76■■■■□ 3.96
FAM213B-207ENST00000465233 HMGXB3Q12766 1538 aa39.74■■■■□ 3.95
FAM213B-207ENST00000465233 BAZ1AQ9NRL2 1556 aaPredicted RBP39.67■■■■□ 3.94
FAM213B-207ENST00000465233 PEG3Q9GZU2 1588 aa39.53■■■■□ 3.92
FAM213B-207ENST00000465233 BAZ1BQ9UIG0 1483 aaKnown RBP39.46■■■■□ 3.91
FAM213B-207ENST00000465233 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
FAM213B-207ENST00000465233 CUX2O14529 1486 aa39.43■■■■□ 3.9
FAM213B-207ENST00000465233 MROH2BQ7Z745 1585 aa39.38■■■■□ 3.89
FAM213B-207ENST00000465233 NESP48681 1621 aa39.32■■■■□ 3.88
FAM213B-207ENST00000465233 DNAJC5Q9H3Z4 198 aa39.24■■■■□ 3.87
FAM213B-207ENST00000465233 LAMC3Q9Y6N6 1575 aa39.1■■■■□ 3.85
FAM213B-207ENST00000465233 THOC2Q8NI27 1593 aaKnown RBP39■■■■□ 3.83
FAM213B-207ENST00000465233 WIZO95785 1651 aa38.92■■■■□ 3.82
FAM213B-207ENST00000465233 KIF21AQ7Z4S6 1674 aa38.89■■■■□ 3.82
FAM213B-207ENST00000465233 PDS5BQ9NTI5 1447 aa38.78■■■■□ 3.8
FAM213B-207ENST00000465233 CADPSQ9ULU8 1353 aa38.72■■■■□ 3.79
FAM213B-207ENST00000465233 RSF1Q96T23 1441 aaPredicted RBP38.55■■■■□ 3.76
FAM213B-207ENST00000465233 MRC2Q9UBG0 1479 aa38.5■■■■□ 3.75
FAM213B-207ENST00000465233 WDR62O43379 1518 aa38.45■■■■□ 3.75
FAM213B-207ENST00000465233 TOP2AP11388 1531 aaKnown RBP38.44■■■■□ 3.74
FAM213B-207ENST00000465233 CEP164Q9UPV0 1460 aa38.35■■■■□ 3.73
FAM213B-207ENST00000465233 CFTRP13569 1480 aa38.34■■■■□ 3.73
FAM213B-207ENST00000465233 FANCD2Q9BXW9 1451 aa38.3■■■■□ 3.72
FAM213B-207ENST00000465233 PRDM2Q13029 1718 aa38.09■■■■□ 3.69
FAM213B-207ENST00000465233 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
FAM213B-207ENST00000465233 CCDC88BA6NC98 1476 aa37.95■■■■□ 3.67
FAM213B-207ENST00000465233 TOPBP1Q92547 1522 aa37.61■■■■□ 3.61
FAM213B-207ENST00000465233 IFT140Q96RY7 1462 aa37.58■■■■□ 3.61
FAM213B-207ENST00000465233 ZNF608Q9ULD9 1512 aaPredicted RBP37.51■■■■□ 3.6
FAM213B-207ENST00000465233 ABCC8Q09428 1581 aa37.51■■■■□ 3.6
FAM213B-207ENST00000465233 OSCARQ8IYS5 282 aa37.51■■■■□ 3.6
FAM213B-207ENST00000465233 DNMBPQ6XZF7 1577 aa37.51■■■■□ 3.59
FAM213B-207ENST00000465233 TRIM41Q8WV44 630 aa37.47■■■■□ 3.59
FAM213B-207ENST00000465233 EIF4G3O43432 1585 aaKnown RBP37.38■■■■□ 3.57
FAM213B-207ENST00000465233 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.57
FAM213B-207ENST00000465233 POLA1P09884 1462 aaPredicted RBP37.22■■■■□ 3.55
FAM213B-207ENST00000465233 RIMBP3CA6NJZ7 1639 aa37.16■■■■□ 3.54
FAM213B-207ENST00000465233 RIMBP3BA6NNM3 1639 aa37.16■■■■□ 3.54
FAM213B-207ENST00000465233 RIMBP3Q9UFD9 1639 aa37.16■■■■□ 3.54
FAM213B-207ENST00000465233 AQRO60306 1485 aaKnown RBP eCLIP37.14■■■■□ 3.546e-7■■■□□ 18.4
FAM213B-207ENST00000465233 CHD1O14646 1710 aa37.1■■■■□ 3.53
FAM213B-207ENST00000465233 RAD54L2Q9Y4B4 1467 aa37.06■■■■□ 3.52
FAM213B-207ENST00000465233 ARHGEF11O15085 1522 aa37.03■■■■□ 3.52
FAM213B-207ENST00000465233 FGD5Q6ZNL6 1462 aa37■■■■□ 3.51
FAM213B-207ENST00000465233 CUX1P39880 1505 aa37■■■■□ 3.51
FAM213B-207ENST00000465233 SOGA1O94964 1423 aa36.99■■■■□ 3.51
FAM213B-207ENST00000465233 WDR97A6NE52 1622 aa36.96■■■■□ 3.51
FAM213B-207ENST00000465233 TDRD9Q8NDG6 1382 aaKnown RBP36.9■■■■□ 3.5
FAM213B-207ENST00000465233 SNAPC4Q5SXM2 1469 aa36.81■■■■□ 3.48
FAM213B-207ENST00000465233 FBLN2P98095 1184 aa36.77■■■■□ 3.48
FAM213B-207ENST00000465233 SUPT5HO00267 1087 aaKnown RBP36.73■■■■□ 3.47
FAM213B-207ENST00000465233 MAGI1Q96QZ7 1491 aaPredicted RBP36.73■■■■□ 3.47
FAM213B-207ENST00000465233 GRIN2BQ13224 1484 aa36.7■■■■□ 3.47
FAM213B-207ENST00000465233 ARAP1Q96P48 1450 aa36.68■■■■□ 3.46
FAM213B-207ENST00000465233 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
FAM213B-207ENST00000465233 CLASP1Q7Z460 1538 aa36.66■■■■□ 3.46
FAM213B-207ENST00000465233 SYNJ1O43426 1573 aa36.61■■■■□ 3.45
FAM213B-207ENST00000465233 ABCA10Q8WWZ4 1543 aa36.6■■■■□ 3.45
FAM213B-207ENST00000465233 CYB5RLQ6IPT4 315 aa36.6■■■■□ 3.45
FAM213B-207ENST00000465233 ABCA5Q8WWZ7 1642 aa36.59■■■■□ 3.45
FAM213B-207ENST00000465233 SYNJ2O15056 1496 aa36.59■■■■□ 3.45
FAM213B-207ENST00000465233 GAPVD1Q14C86 1478 aa36.58■■■■□ 3.45
FAM213B-207ENST00000465233 CHMP7Q8WUX9 453 aaPredicted RBP36.54■■■■□ 3.44
FAM213B-207ENST00000465233 BIVM-ERCC5R4GMW8 1640 aa36.48■■■■□ 3.43
FAM213B-207ENST00000465233 TOP2BQ02880 1626 aa36.44■■■■□ 3.42
FAM213B-207ENST00000465233 WRNQ14191 1432 aaPredicted RBP eCLIP36.4■■■■□ 3.42
FAM213B-207ENST00000465233 ADAMTS12P58397 1594 aa36.3■■■■□ 3.4
FAM213B-207ENST00000465233 GRIN2AQ12879 1464 aa36.25■■■■□ 3.39
FAM213B-207ENST00000465233 CEP170Q5SW79 1584 aa36.16■■■■□ 3.38
FAM213B-207ENST00000465233 TRHP20396 242 aaPredicted RBP36.15■■■■□ 3.38
FAM213B-207ENST00000465233 NUP160Q12769 1436 aa36.15■■■■□ 3.38
FAM213B-207ENST00000465233 ERICH3Q5RHP9 1530 aa36.14■■■■□ 3.38
FAM213B-207ENST00000465233 FHAD1B1AJZ9 1412 aa36.12■■■■□ 3.37
FAM213B-207ENST00000465233 ERCC6L2Q5T890 1561 aa36.07■■■■□ 3.37
FAM213B-207ENST00000465233 SHROOM2Q13796 1616 aa36.05■■■■□ 3.36
FAM213B-207ENST00000465233 RUSC2Q8N2Y8 1516 aa35.79■■■■□ 3.32
FAM213B-207ENST00000465233 PRG4Q92954 1404 aaPredicted RBP35.73■■■■□ 3.31
FAM213B-207ENST00000465233 CUL7Q14999 1698 aa35.66■■■■□ 3.3
FAM213B-207ENST00000465233 JPH4Q96JJ6 628 aa35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms