RNA–Protein interactions for RNA: ENST00000465181.1

ACAA1-213, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 3

Gene ACAA1, Length 656 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-213ENST00000465181 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
ACAA1-213ENST00000465181 ABCC9O60706 1549 aa28.52■■■□□ 2.16
ACAA1-213ENST00000465181 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
ACAA1-213ENST00000465181 RB1CC1Q8TDY2 1594 aa26.99■■□□□ 1.91
ACAA1-213ENST00000465181 DNAJC5BQ9UF47 199 aa26.93■■□□□ 1.9
ACAA1-213ENST00000465181 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
ACAA1-213ENST00000465181 NACADO15069 1562 aa26.81■■□□□ 1.88
ACAA1-213ENST00000465181 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
ACAA1-213ENST00000465181 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
ACAA1-213ENST00000465181 BICRAQ9NZM4 1560 aa26.26■■□□□ 1.79
ACAA1-213ENST00000465181 ZCCHC6Q5VYS8 1495 aaKnown RBP26.2■■□□□ 1.78
ACAA1-213ENST00000465181 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
ACAA1-213ENST00000465181 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
ACAA1-213ENST00000465181 SHROOM4Q9ULL8 1493 aa25.87■■□□□ 1.73
ACAA1-213ENST00000465181 SCRIBQ14160 1630 aa25.84■■□□□ 1.73
ACAA1-213ENST00000465181 CECR2Q9BXF3 1484 aa25.69■■□□□ 1.7
ACAA1-213ENST00000465181 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
ACAA1-213ENST00000465181 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
ACAA1-213ENST00000465181 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
ACAA1-213ENST00000465181 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
ACAA1-213ENST00000465181 DNAJC5Q9H3Z4 198 aa24.71■■□□□ 1.55
ACAA1-213ENST00000465181 SMARCA4P51532 1647 aa24.62■■□□□ 1.53
ACAA1-213ENST00000465181 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
ACAA1-213ENST00000465181 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
ACAA1-213ENST00000465181 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
ACAA1-213ENST00000465181 CUX2O14529 1486 aa24.55■■□□□ 1.52
ACAA1-213ENST00000465181 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
ACAA1-213ENST00000465181 NESP48681 1621 aa24.48■■□□□ 1.51
ACAA1-213ENST00000465181 BAZ1BQ9UIG0 1483 aaKnown RBP24.48■■□□□ 1.51
ACAA1-213ENST00000465181 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
ACAA1-213ENST00000465181 PEG3Q9GZU2 1588 aa24.39■■□□□ 1.5
ACAA1-213ENST00000465181 LAMC3Q9Y6N6 1575 aa24.18■■□□□ 1.46
ACAA1-213ENST00000465181 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
ACAA1-213ENST00000465181 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
ACAA1-213ENST00000465181 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
ACAA1-213ENST00000465181 WIZO95785 1651 aa24■■□□□ 1.43
ACAA1-213ENST00000465181 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
ACAA1-213ENST00000465181 MRC2Q9UBG0 1479 aa23.93■■□□□ 1.42
ACAA1-213ENST00000465181 RSF1Q96T23 1441 aaPredicted RBP23.92■■□□□ 1.42
ACAA1-213ENST00000465181 WDR62O43379 1518 aa23.84■■□□□ 1.41
ACAA1-213ENST00000465181 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
ACAA1-213ENST00000465181 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
ACAA1-213ENST00000465181 CFTRP13569 1480 aa23.8■■□□□ 1.4
ACAA1-213ENST00000465181 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
ACAA1-213ENST00000465181 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
ACAA1-213ENST00000465181 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
ACAA1-213ENST00000465181 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
ACAA1-213ENST00000465181 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
ACAA1-213ENST00000465181 ZNF608Q9ULD9 1512 aaPredicted RBP23.36■■□□□ 1.33
ACAA1-213ENST00000465181 IFT140Q96RY7 1462 aa23.35■■□□□ 1.33
ACAA1-213ENST00000465181 TOPBP1Q92547 1522 aa23.33■■□□□ 1.32
ACAA1-213ENST00000465181 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
ACAA1-213ENST00000465181 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
ACAA1-213ENST00000465181 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
ACAA1-213ENST00000465181 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.31e-6■■■■□ 25.9
ACAA1-213ENST00000465181 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
ACAA1-213ENST00000465181 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
ACAA1-213ENST00000465181 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
ACAA1-213ENST00000465181 RAD54L2Q9Y4B4 1467 aa23.06■■□□□ 1.28
ACAA1-213ENST00000465181 RIMBP3CA6NJZ7 1639 aa23.06■■□□□ 1.28
ACAA1-213ENST00000465181 RIMBP3BA6NNM3 1639 aa23.06■■□□□ 1.28
ACAA1-213ENST00000465181 RIMBP3Q9UFD9 1639 aa23.06■■□□□ 1.28
ACAA1-213ENST00000465181 ARHGEF11O15085 1522 aa23.06■■□□□ 1.28
ACAA1-213ENST00000465181 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
ACAA1-213ENST00000465181 SOGA1O94964 1423 aa23.03■■□□□ 1.28
ACAA1-213ENST00000465181 FBLN2P98095 1184 aa23.03■■□□□ 1.28
ACAA1-213ENST00000465181 CYB5RLQ6IPT4 315 aa22.98■■□□□ 1.27
ACAA1-213ENST00000465181 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
ACAA1-213ENST00000465181 CUX1P39880 1505 aa22.92■■□□□ 1.26
ACAA1-213ENST00000465181 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
ACAA1-213ENST00000465181 ARAP1Q96P48 1450 aa22.86■■□□□ 1.25
ACAA1-213ENST00000465181 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
ACAA1-213ENST00000465181 CHD1O14646 1710 aa22.83■■□□□ 1.25
ACAA1-213ENST00000465181 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
ACAA1-213ENST00000465181 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
ACAA1-213ENST00000465181 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
ACAA1-213ENST00000465181 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
ACAA1-213ENST00000465181 CLASP1Q7Z460 1538 aa22.73■■□□□ 1.23
ACAA1-213ENST00000465181 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
ACAA1-213ENST00000465181 TRHP20396 242 aaPredicted RBP22.72■■□□□ 1.23
ACAA1-213ENST00000465181 GAPVD1Q14C86 1478 aa22.71■■□□□ 1.23
ACAA1-213ENST00000465181 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
ACAA1-213ENST00000465181 SYNJ1O43426 1573 aa22.66■■□□□ 1.22
ACAA1-213ENST00000465181 WRNQ14191 1432 aaPredicted RBP eCLIP22.59■■□□□ 1.21
ACAA1-213ENST00000465181 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
ACAA1-213ENST00000465181 PBRM1Q86U86 1689 aa22.5■■□□□ 1.19
ACAA1-213ENST00000465181 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
ACAA1-213ENST00000465181 NUP160Q12769 1436 aa22.46■■□□□ 1.19
ACAA1-213ENST00000465181 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
ACAA1-213ENST00000465181 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
ACAA1-213ENST00000465181 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
ACAA1-213ENST00000465181 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
ACAA1-213ENST00000465181 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
ACAA1-213ENST00000465181 CEP170Q5SW79 1584 aa22.39■■□□□ 1.18
ACAA1-213ENST00000465181 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
ACAA1-213ENST00000465181 JPH4Q96JJ6 628 aa22.27■■□□□ 1.16
ACAA1-213ENST00000465181 PRG4Q92954 1404 aaPredicted RBP22.25■■□□□ 1.15
ACAA1-213ENST00000465181 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
ACAA1-213ENST00000465181 IGF1RP08069 1367 aa22.18■■□□□ 1.14
ACAA1-213ENST00000465181 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms