RNA–Protein interactions for RNA: ENST00000465117.5

PLXNB1-208, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 627 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-208ENST00000465117 NISCHQ9Y2I1 1504 aa33.21■■■□□ 2.91
PLXNB1-208ENST00000465117 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
PLXNB1-208ENST00000465117 ABCC9O60706 1549 aa28.33■■■□□ 2.13
PLXNB1-208ENST00000465117 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.03
PLXNB1-208ENST00000465117 DCAF8L2P0C7V8 631 aa27.56■■■□□ 2
PLXNB1-208ENST00000465117 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.98
PLXNB1-208ENST00000465117 NACADO15069 1562 aa27.43■■□□□ 1.98
PLXNB1-208ENST00000465117 MYO15BQ96JP2 1530 aa27.39■■□□□ 1.98
PLXNB1-208ENST00000465117 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
PLXNB1-208ENST00000465117 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.89
PLXNB1-208ENST00000465117 SCRIBQ14160 1630 aa26.83■■□□□ 1.88
PLXNB1-208ENST00000465117 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
PLXNB1-208ENST00000465117 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
PLXNB1-208ENST00000465117 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
PLXNB1-208ENST00000465117 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
PLXNB1-208ENST00000465117 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
PLXNB1-208ENST00000465117 DNAJC5BQ9UF47 199 aa25.74■■□□□ 1.71
PLXNB1-208ENST00000465117 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
PLXNB1-208ENST00000465117 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
PLXNB1-208ENST00000465117 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
PLXNB1-208ENST00000465117 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
PLXNB1-208ENST00000465117 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
PLXNB1-208ENST00000465117 ATAD2BQ9ULI0 1458 aa25.44■■□□□ 1.66
PLXNB1-208ENST00000465117 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
PLXNB1-208ENST00000465117 WIZO95785 1651 aa25.39■■□□□ 1.66
PLXNB1-208ENST00000465117 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
PLXNB1-208ENST00000465117 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
PLXNB1-208ENST00000465117 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
PLXNB1-208ENST00000465117 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
PLXNB1-208ENST00000465117 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.62
PLXNB1-208ENST00000465117 TOP2AP11388 1531 aaKnown RBP25.08■■□□□ 1.61
PLXNB1-208ENST00000465117 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
PLXNB1-208ENST00000465117 NESP48681 1621 aa24.68■■□□□ 1.54
PLXNB1-208ENST00000465117 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
PLXNB1-208ENST00000465117 CFTRP13569 1480 aa24.58■■□□□ 1.52
PLXNB1-208ENST00000465117 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
PLXNB1-208ENST00000465117 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
PLXNB1-208ENST00000465117 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
PLXNB1-208ENST00000465117 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
PLXNB1-208ENST00000465117 FANCD2Q9BXW9 1451 aa24.34■■□□□ 1.49
PLXNB1-208ENST00000465117 ERCC6Q03468 1493 aa24.3■■□□□ 1.48
PLXNB1-208ENST00000465117 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
PLXNB1-208ENST00000465117 THOC2Q8NI27 1593 aaKnown RBP24.17■■□□□ 1.46
PLXNB1-208ENST00000465117 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
PLXNB1-208ENST00000465117 URB2Q14146 1524 aaKnown RBP24.13■■□□□ 1.45
PLXNB1-208ENST00000465117 ABCC8Q09428 1581 aa24.08■■□□□ 1.45
PLXNB1-208ENST00000465117 WDR62O43379 1518 aa24.05■■□□□ 1.44
PLXNB1-208ENST00000465117 CUX1P39880 1505 aa24.03■■□□□ 1.44
PLXNB1-208ENST00000465117 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
PLXNB1-208ENST00000465117 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
PLXNB1-208ENST00000465117 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
PLXNB1-208ENST00000465117 SYNJ1O43426 1573 aa23.95■■□□□ 1.43
PLXNB1-208ENST00000465117 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
PLXNB1-208ENST00000465117 CUX2O14529 1486 aa23.88■■□□□ 1.41
PLXNB1-208ENST00000465117 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
PLXNB1-208ENST00000465117 POLA1P09884 1462 aaPredicted RBP23.85■■□□□ 1.41
PLXNB1-208ENST00000465117 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
PLXNB1-208ENST00000465117 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
PLXNB1-208ENST00000465117 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
PLXNB1-208ENST00000465117 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
PLXNB1-208ENST00000465117 SOGA1O94964 1423 aa23.74■■□□□ 1.39
PLXNB1-208ENST00000465117 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
PLXNB1-208ENST00000465117 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
PLXNB1-208ENST00000465117 ZNF608Q9ULD9 1512 aaPredicted RBP23.67■■□□□ 1.38
PLXNB1-208ENST00000465117 WDR97A6NE52 1622 aa23.64■■□□□ 1.38
PLXNB1-208ENST00000465117 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
PLXNB1-208ENST00000465117 TDRD9Q8NDG6 1382 aaKnown RBP23.59■■□□□ 1.37
PLXNB1-208ENST00000465117 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.365e-8■■■■■ 40.9
PLXNB1-208ENST00000465117 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
PLXNB1-208ENST00000465117 ABCA5Q8WWZ7 1642 aa23.5■■□□□ 1.35
PLXNB1-208ENST00000465117 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
PLXNB1-208ENST00000465117 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
PLXNB1-208ENST00000465117 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
PLXNB1-208ENST00000465117 PBRM1Q86U86 1689 aa23.39■■□□□ 1.34
PLXNB1-208ENST00000465117 GRIN2BQ13224 1484 aa23.38■■□□□ 1.33
PLXNB1-208ENST00000465117 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
PLXNB1-208ENST00000465117 IGF1RP08069 1367 aa23.33■■□□□ 1.33
PLXNB1-208ENST00000465117 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
PLXNB1-208ENST00000465117 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
PLXNB1-208ENST00000465117 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
PLXNB1-208ENST00000465117 ADAMTS12P58397 1594 aa23.24■■□□□ 1.31
PLXNB1-208ENST00000465117 EEA1Q15075 1411 aa23.2■■□□□ 1.3
PLXNB1-208ENST00000465117 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
PLXNB1-208ENST00000465117 SYNJ2O15056 1496 aa23.18■■□□□ 1.3
PLXNB1-208ENST00000465117 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
PLXNB1-208ENST00000465117 CHD1O14646 1710 aa23.17■■□□□ 1.3
PLXNB1-208ENST00000465117 CARMIL1Q5VZK9 1371 aa23.16■■□□□ 1.3
PLXNB1-208ENST00000465117 CUL7Q14999 1698 aa23.16■■□□□ 1.3
PLXNB1-208ENST00000465117 FBLN2P98095 1184 aa23.14■■□□□ 1.29
PLXNB1-208ENST00000465117 PRXQ9BXM0 1461 aa23.13■■□□□ 1.29
PLXNB1-208ENST00000465117 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
PLXNB1-208ENST00000465117 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
PLXNB1-208ENST00000465117 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
PLXNB1-208ENST00000465117 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
PLXNB1-208ENST00000465117 NUP160Q12769 1436 aa23■■□□□ 1.27
PLXNB1-208ENST00000465117 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
PLXNB1-208ENST00000465117 KIF21BO75037 1637 aa22.99■■□□□ 1.27
PLXNB1-208ENST00000465117 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
PLXNB1-208ENST00000465117 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
PLXNB1-208ENST00000465117 GOLGA3Q08378 1498 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms