RNA–Protein interactions for RNA: ENST00000464367.1

RERE-206, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 639 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-206ENST00000464367 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
RERE-206ENST00000464367 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
RERE-206ENST00000464367 ABCC9O60706 1549 aa32.6■■■□□ 2.81
RERE-206ENST00000464367 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
RERE-206ENST00000464367 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
RERE-206ENST00000464367 NACADO15069 1562 aa30.83■■■□□ 2.53
RERE-206ENST00000464367 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
RERE-206ENST00000464367 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
RERE-206ENST00000464367 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
RERE-206ENST00000464367 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
RERE-206ENST00000464367 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
RERE-206ENST00000464367 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
RERE-206ENST00000464367 DCAF1Q9Y4B6 1507 aa30.02■■■□□ 2.4
RERE-206ENST00000464367 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
RERE-206ENST00000464367 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
RERE-206ENST00000464367 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
RERE-206ENST00000464367 EIF4G1Q04637 1599 aaKnown RBP29.42■■■□□ 2.3
RERE-206ENST00000464367 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
RERE-206ENST00000464367 DNAJC5Q9H3Z4 198 aa28.77■■■□□ 2.2
RERE-206ENST00000464367 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
RERE-206ENST00000464367 SMARCA4P51532 1647 aa28.38■■■□□ 2.13
RERE-206ENST00000464367 ATAD2BQ9ULI0 1458 aa28.37■■■□□ 2.13
RERE-206ENST00000464367 SMARCA2P51531 1590 aa28.29■■■□□ 2.12
RERE-206ENST00000464367 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
RERE-206ENST00000464367 BAZ1AQ9NRL2 1556 aaPredicted RBP28.21■■■□□ 2.11
RERE-206ENST00000464367 CUX2O14529 1486 aa28.18■■■□□ 2.1
RERE-206ENST00000464367 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
RERE-206ENST00000464367 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
RERE-206ENST00000464367 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
RERE-206ENST00000464367 NESP48681 1621 aa28.03■■■□□ 2.08
RERE-206ENST00000464367 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.07
RERE-206ENST00000464367 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
RERE-206ENST00000464367 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
RERE-206ENST00000464367 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
RERE-206ENST00000464367 WIZO95785 1651 aa27.71■■■□□ 2.03
RERE-206ENST00000464367 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
RERE-206ENST00000464367 CADPSQ9ULU8 1353 aa27.56■■■□□ 2
RERE-206ENST00000464367 MRC2Q9UBG0 1479 aa27.42■■□□□ 1.98
RERE-206ENST00000464367 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
RERE-206ENST00000464367 WDR62O43379 1518 aa27.38■■□□□ 1.97
RERE-206ENST00000464367 TOP2AP11388 1531 aaKnown RBP27.33■■□□□ 1.97
RERE-206ENST00000464367 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
RERE-206ENST00000464367 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
RERE-206ENST00000464367 CFTRP13569 1480 aa27.27■■□□□ 1.96
RERE-206ENST00000464367 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
RERE-206ENST00000464367 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
RERE-206ENST00000464367 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
RERE-206ENST00000464367 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
RERE-206ENST00000464367 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
RERE-206ENST00000464367 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
RERE-206ENST00000464367 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
RERE-206ENST00000464367 ZNF608Q9ULD9 1512 aaPredicted RBP26.73■■□□□ 1.87
RERE-206ENST00000464367 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
RERE-206ENST00000464367 ABCC8Q09428 1581 aa26.68■■□□□ 1.86
RERE-206ENST00000464367 EIF4G3O43432 1585 aaKnown RBP26.62■■□□□ 1.85
RERE-206ENST00000464367 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
RERE-206ENST00000464367 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
RERE-206ENST00000464367 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
RERE-206ENST00000464367 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
RERE-206ENST00000464367 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
RERE-206ENST00000464367 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.83
RERE-206ENST00000464367 CHD1O14646 1710 aa26.45■■□□□ 1.83
RERE-206ENST00000464367 ARHGEF11O15085 1522 aa26.39■■□□□ 1.82
RERE-206ENST00000464367 RAD54L2Q9Y4B4 1467 aa26.39■■□□□ 1.82
RERE-206ENST00000464367 SOGA1O94964 1423 aa26.34■■□□□ 1.81
RERE-206ENST00000464367 FGD5Q6ZNL6 1462 aa26.33■■□□□ 1.81
RERE-206ENST00000464367 CUX1P39880 1505 aa26.33■■□□□ 1.81
RERE-206ENST00000464367 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
RERE-206ENST00000464367 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
RERE-206ENST00000464367 FBLN2P98095 1184 aa26.24■■□□□ 1.79
RERE-206ENST00000464367 SNAPC4Q5SXM2 1469 aa26.22■■□□□ 1.79
RERE-206ENST00000464367 CYB5RLQ6IPT4 315 aa26.15■■□□□ 1.78
RERE-206ENST00000464367 ARAP1Q96P48 1450 aa26.15■■□□□ 1.78
RERE-206ENST00000464367 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
RERE-206ENST00000464367 MAGI1Q96QZ7 1491 aaPredicted RBP26.14■■□□□ 1.78
RERE-206ENST00000464367 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
RERE-206ENST00000464367 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
RERE-206ENST00000464367 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
RERE-206ENST00000464367 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
RERE-206ENST00000464367 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
RERE-206ENST00000464367 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
RERE-206ENST00000464367 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
RERE-206ENST00000464367 CHMP7Q8WUX9 453 aaPredicted RBP26.04■■□□□ 1.76
RERE-206ENST00000464367 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
RERE-206ENST00000464367 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
RERE-206ENST00000464367 BIVM-ERCC5R4GMW8 1640 aa25.94■■□□□ 1.74
RERE-206ENST00000464367 TOP2BQ02880 1626 aa25.91■■□□□ 1.74
RERE-206ENST00000464367 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.74
RERE-206ENST00000464367 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
RERE-206ENST00000464367 GRIN2AQ12879 1464 aa25.81■■□□□ 1.72
RERE-206ENST00000464367 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
RERE-206ENST00000464367 NUP160Q12769 1436 aa25.72■■□□□ 1.71
RERE-206ENST00000464367 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
RERE-206ENST00000464367 ERICH3Q5RHP9 1530 aa25.71■■□□□ 1.71
RERE-206ENST00000464367 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.7
RERE-206ENST00000464367 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
RERE-206ENST00000464367 SHROOM2Q13796 1616 aa25.65■■□□□ 1.7
RERE-206ENST00000464367 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
RERE-206ENST00000464367 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.66
RERE-206ENST00000464367 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms