RNA–Protein interactions for RNA: ENST00000464294.1

PLXNB1-207, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 1,025 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-207ENST00000464294 NISCHQ9Y2I1 1504 aa41.36■■■■■ 4.21
PLXNB1-207ENST00000464294 ABCC9O60706 1549 aa37.66■■■■□ 3.62
PLXNB1-207ENST00000464294 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
PLXNB1-207ENST00000464294 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
PLXNB1-207ENST00000464294 DNAJC5BQ9UF47 199 aa35.61■■■■□ 3.29
PLXNB1-207ENST00000464294 NACADO15069 1562 aa35.39■■■■□ 3.26
PLXNB1-207ENST00000464294 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
PLXNB1-207ENST00000464294 PABPN1Q86U42 306 aaKnown RBP eCLIP35.03■■■■□ 3.2
PLXNB1-207ENST00000464294 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.16
PLXNB1-207ENST00000464294 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
PLXNB1-207ENST00000464294 BICRAQ9NZM4 1560 aa34.57■■■■□ 3.12
PLXNB1-207ENST00000464294 SHROOM4Q9ULL8 1493 aa34.22■■■■□ 3.07
PLXNB1-207ENST00000464294 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
PLXNB1-207ENST00000464294 DCAF1Q9Y4B6 1507 aa34.16■■■■□ 3.06
PLXNB1-207ENST00000464294 CECR2Q9BXF3 1484 aa34.01■■■■□ 3.03
PLXNB1-207ENST00000464294 CC2D2AQ9P2K1 1620 aa33.99■■■■□ 3.03
PLXNB1-207ENST00000464294 SCRIBQ14160 1630 aa33.92■■■■□ 3.02
PLXNB1-207ENST00000464294 EIF4G1Q04637 1599 aaKnown RBP33.83■■■■□ 3.01
PLXNB1-207ENST00000464294 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
PLXNB1-207ENST00000464294 CUX2O14529 1486 aa32.68■■■□□ 2.82
PLXNB1-207ENST00000464294 NCAPD3P42695 1498 aa32.67■■■□□ 2.82
PLXNB1-207ENST00000464294 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
PLXNB1-207ENST00000464294 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
PLXNB1-207ENST00000464294 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
PLXNB1-207ENST00000464294 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
PLXNB1-207ENST00000464294 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
PLXNB1-207ENST00000464294 NESP48681 1621 aa32.19■■■□□ 2.74
PLXNB1-207ENST00000464294 BAZ1BQ9UIG0 1483 aaKnown RBP32.19■■■□□ 2.74
PLXNB1-207ENST00000464294 BAZ1AQ9NRL2 1556 aaPredicted RBP32.17■■■□□ 2.74
PLXNB1-207ENST00000464294 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
PLXNB1-207ENST00000464294 LAMC3Q9Y6N6 1575 aa31.99■■■□□ 2.71
PLXNB1-207ENST00000464294 THOC2Q8NI27 1593 aaKnown RBP31.94■■■□□ 2.7
PLXNB1-207ENST00000464294 PDS5BQ9NTI5 1447 aa31.9■■■□□ 2.7
PLXNB1-207ENST00000464294 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
PLXNB1-207ENST00000464294 KIF21AQ7Z4S6 1674 aa31.75■■■□□ 2.67
PLXNB1-207ENST00000464294 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
PLXNB1-207ENST00000464294 MRC2Q9UBG0 1479 aa31.58■■■□□ 2.65
PLXNB1-207ENST00000464294 TRIM41Q8WV44 630 aa31.53■■■□□ 2.64
PLXNB1-207ENST00000464294 WDR62O43379 1518 aa31.47■■■□□ 2.63
PLXNB1-207ENST00000464294 WIZO95785 1651 aa31.41■■■□□ 2.62
PLXNB1-207ENST00000464294 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
PLXNB1-207ENST00000464294 FANCD2Q9BXW9 1451 aa31.29■■■□□ 2.6
PLXNB1-207ENST00000464294 CFTRP13569 1480 aa31.21■■■□□ 2.59
PLXNB1-207ENST00000464294 OSCARQ8IYS5 282 aa31.19■■■□□ 2.58
PLXNB1-207ENST00000464294 RSF1Q96T23 1441 aaPredicted RBP31.06■■■□□ 2.56
PLXNB1-207ENST00000464294 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
PLXNB1-207ENST00000464294 URB2Q14146 1524 aaKnown RBP31■■■□□ 2.55
PLXNB1-207ENST00000464294 PRDM2Q13029 1718 aa30.8■■■□□ 2.52
PLXNB1-207ENST00000464294 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
PLXNB1-207ENST00000464294 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.5
PLXNB1-207ENST00000464294 ZNF608Q9ULD9 1512 aaPredicted RBP30.68■■■□□ 2.5
PLXNB1-207ENST00000464294 RIMBP3CA6NJZ7 1639 aa30.68■■■□□ 2.5
PLXNB1-207ENST00000464294 RIMBP3BA6NNM3 1639 aa30.68■■■□□ 2.5
PLXNB1-207ENST00000464294 RIMBP3Q9UFD9 1639 aa30.68■■■□□ 2.5
PLXNB1-207ENST00000464294 ABCC8Q09428 1581 aa30.65■■■□□ 2.5
PLXNB1-207ENST00000464294 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
PLXNB1-207ENST00000464294 ARHGEF11O15085 1522 aa30.57■■■□□ 2.49
PLXNB1-207ENST00000464294 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
PLXNB1-207ENST00000464294 DNMBPQ6XZF7 1577 aa30.49■■■□□ 2.47
PLXNB1-207ENST00000464294 CYB5RLQ6IPT4 315 aa30.46■■■□□ 2.47
PLXNB1-207ENST00000464294 AQRO60306 1485 aaKnown RBP eCLIP30.4■■■□□ 2.464e-8■■■■■ 33.9
PLXNB1-207ENST00000464294 FBLN2P98095 1184 aa30.39■■■□□ 2.46
PLXNB1-207ENST00000464294 TARBP1Q13395 1621 aaKnown RBP30.34■■■□□ 2.45
PLXNB1-207ENST00000464294 CHD1O14646 1710 aa30.32■■■□□ 2.44
PLXNB1-207ENST00000464294 TRHP20396 242 aaPredicted RBP30.3■■■□□ 2.44
PLXNB1-207ENST00000464294 POLA1P09884 1462 aaPredicted RBP30.3■■■□□ 2.44
PLXNB1-207ENST00000464294 ARAP1Q96P48 1450 aa30.22■■■□□ 2.43
PLXNB1-207ENST00000464294 SOGA1O94964 1423 aa30.22■■■□□ 2.43
PLXNB1-207ENST00000464294 RAD54L2Q9Y4B4 1467 aa30.18■■■□□ 2.42
PLXNB1-207ENST00000464294 TDRD9Q8NDG6 1382 aaKnown RBP30.16■■■□□ 2.42
PLXNB1-207ENST00000464294 CHMP7Q8WUX9 453 aaPredicted RBP30.11■■■□□ 2.41
PLXNB1-207ENST00000464294 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
PLXNB1-207ENST00000464294 SNAPC4Q5SXM2 1469 aa30.08■■■□□ 2.41
PLXNB1-207ENST00000464294 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
PLXNB1-207ENST00000464294 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
PLXNB1-207ENST00000464294 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
PLXNB1-207ENST00000464294 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
PLXNB1-207ENST00000464294 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
PLXNB1-207ENST00000464294 CUX1P39880 1505 aa29.93■■■□□ 2.38
PLXNB1-207ENST00000464294 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
PLXNB1-207ENST00000464294 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
PLXNB1-207ENST00000464294 AEBP2Q6ZN18 517 aaPredicted RBP29.76■■■□□ 2.35
PLXNB1-207ENST00000464294 PBRM1Q86U86 1689 aa29.76■■■□□ 2.35
PLXNB1-207ENST00000464294 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
PLXNB1-207ENST00000464294 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
PLXNB1-207ENST00000464294 GRIN2AQ12879 1464 aa29.57■■■□□ 2.32
PLXNB1-207ENST00000464294 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.32
PLXNB1-207ENST00000464294 SUPT5HO00267 1087 aaKnown RBP29.49■■■□□ 2.31
PLXNB1-207ENST00000464294 NUP160Q12769 1436 aa29.47■■■□□ 2.31
PLXNB1-207ENST00000464294 ADAMTS12P58397 1594 aa29.46■■■□□ 2.31
PLXNB1-207ENST00000464294 FHAD1B1AJZ9 1412 aa29.45■■■□□ 2.3
PLXNB1-207ENST00000464294 CEP170Q5SW79 1584 aa29.44■■■□□ 2.3
PLXNB1-207ENST00000464294 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
PLXNB1-207ENST00000464294 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
PLXNB1-207ENST00000464294 BIVM-ERCC5R4GMW8 1640 aa29.35■■■□□ 2.29
PLXNB1-207ENST00000464294 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
PLXNB1-207ENST00000464294 SHROOM2Q13796 1616 aa29.34■■■□□ 2.29
PLXNB1-207ENST00000464294 PRG4Q92954 1404 aaPredicted RBP29.26■■■□□ 2.27
PLXNB1-207ENST00000464294 JPH4Q96JJ6 628 aa29.25■■■□□ 2.27
PLXNB1-207ENST00000464294 NPM1P06748 294 aaKnown RBP eCLIP29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms