RNA–Protein interactions for RNA: ENST00000464163.1

FGFR1-215, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-215ENST00000464163 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
FGFR1-215ENST00000464163 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
FGFR1-215ENST00000464163 ABCC9O60706 1549 aa22.98■■□□□ 1.27
FGFR1-215ENST00000464163 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
FGFR1-215ENST00000464163 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
FGFR1-215ENST00000464163 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
FGFR1-215ENST00000464163 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
FGFR1-215ENST00000464163 NACADO15069 1562 aa22.21■■□□□ 1.15
FGFR1-215ENST00000464163 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
FGFR1-215ENST00000464163 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
FGFR1-215ENST00000464163 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.06
FGFR1-215ENST00000464163 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
FGFR1-215ENST00000464163 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
FGFR1-215ENST00000464163 SHROOM4Q9ULL8 1493 aa21.48■■□□□ 1.03
FGFR1-215ENST00000464163 DNAJC5BQ9UF47 199 aa21.41■■□□□ 1.02
FGFR1-215ENST00000464163 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
FGFR1-215ENST00000464163 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.94
FGFR1-215ENST00000464163 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
FGFR1-215ENST00000464163 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
FGFR1-215ENST00000464163 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
FGFR1-215ENST00000464163 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
FGFR1-215ENST00000464163 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
FGFR1-215ENST00000464163 ATAD2BQ9ULI0 1458 aa20.61■□□□□ 0.89
FGFR1-215ENST00000464163 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
FGFR1-215ENST00000464163 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
FGFR1-215ENST00000464163 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
FGFR1-215ENST00000464163 WIZO95785 1651 aa20.52■□□□□ 0.88
FGFR1-215ENST00000464163 HMGXB3Q12766 1538 aa20.41■□□□□ 0.86
FGFR1-215ENST00000464163 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
FGFR1-215ENST00000464163 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
FGFR1-215ENST00000464163 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
FGFR1-215ENST00000464163 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
FGFR1-215ENST00000464163 CADPSQ9ULU8 1353 aa19.97■□□□□ 0.79
FGFR1-215ENST00000464163 NESP48681 1621 aa19.97■□□□□ 0.79
FGFR1-215ENST00000464163 CFTRP13569 1480 aa19.92■□□□□ 0.78
FGFR1-215ENST00000464163 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
FGFR1-215ENST00000464163 ERCC6Q03468 1493 aa19.82■□□□□ 0.76
FGFR1-215ENST00000464163 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
FGFR1-215ENST00000464163 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
FGFR1-215ENST00000464163 CUX2O14529 1486 aa19.67■□□□□ 0.74
FGFR1-215ENST00000464163 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
FGFR1-215ENST00000464163 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
FGFR1-215ENST00000464163 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
FGFR1-215ENST00000464163 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
FGFR1-215ENST00000464163 URB2Q14146 1524 aaKnown RBP19.52■□□□□ 0.72
FGFR1-215ENST00000464163 THOC2Q8NI27 1593 aaKnown RBP19.52■□□□□ 0.71
FGFR1-215ENST00000464163 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
FGFR1-215ENST00000464163 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
FGFR1-215ENST00000464163 WDR62O43379 1518 aa19.46■□□□□ 0.71
FGFR1-215ENST00000464163 CUX1P39880 1505 aa19.44■□□□□ 0.7
FGFR1-215ENST00000464163 TOPBP1Q92547 1522 aa19.44■□□□□ 0.7
FGFR1-215ENST00000464163 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
FGFR1-215ENST00000464163 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
FGFR1-215ENST00000464163 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
FGFR1-215ENST00000464163 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
FGFR1-215ENST00000464163 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
FGFR1-215ENST00000464163 BIVM-ERCC5R4GMW8 1640 aa19.3■□□□□ 0.68
FGFR1-215ENST00000464163 FGD5Q6ZNL6 1462 aa19.29■□□□□ 0.68
FGFR1-215ENST00000464163 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
FGFR1-215ENST00000464163 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
FGFR1-215ENST00000464163 SOGA1O94964 1423 aa19.25■□□□□ 0.67
FGFR1-215ENST00000464163 TRIM41Q8WV44 630 aa19.22■□□□□ 0.67
FGFR1-215ENST00000464163 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
FGFR1-215ENST00000464163 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
FGFR1-215ENST00000464163 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
FGFR1-215ENST00000464163 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
FGFR1-215ENST00000464163 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
FGFR1-215ENST00000464163 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.65
FGFR1-215ENST00000464163 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
FGFR1-215ENST00000464163 RUSC2Q8N2Y8 1516 aa19.01■□□□□ 0.63
FGFR1-215ENST00000464163 EIF4G3O43432 1585 aaKnown RBP19.01■□□□□ 0.63
FGFR1-215ENST00000464163 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
FGFR1-215ENST00000464163 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
FGFR1-215ENST00000464163 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
FGFR1-215ENST00000464163 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
FGFR1-215ENST00000464163 IGF1RP08069 1367 aa18.94■□□□□ 0.62
FGFR1-215ENST00000464163 GRIN2BQ13224 1484 aa18.94■□□□□ 0.62
FGFR1-215ENST00000464163 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
FGFR1-215ENST00000464163 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
FGFR1-215ENST00000464163 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
FGFR1-215ENST00000464163 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
FGFR1-215ENST00000464163 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
FGFR1-215ENST00000464163 CSRNP3Q8WYN3 585 aa18.83■□□□□ 0.6
FGFR1-215ENST00000464163 EEA1Q15075 1411 aa18.81■□□□□ 0.6
FGFR1-215ENST00000464163 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
FGFR1-215ENST00000464163 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
FGFR1-215ENST00000464163 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
FGFR1-215ENST00000464163 ADAMTS12P58397 1594 aa18.77■□□□□ 0.6
FGFR1-215ENST00000464163 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
FGFR1-215ENST00000464163 FBLN2P98095 1184 aa18.76■□□□□ 0.59
FGFR1-215ENST00000464163 PRXQ9BXM0 1461 aa18.74■□□□□ 0.59
FGFR1-215ENST00000464163 CUL7Q14999 1698 aa18.72■□□□□ 0.59
FGFR1-215ENST00000464163 GRIN2AQ12879 1464 aa18.7■□□□□ 0.58
FGFR1-215ENST00000464163 CHD1O14646 1710 aa18.69■□□□□ 0.58
FGFR1-215ENST00000464163 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
FGFR1-215ENST00000464163 NUP160Q12769 1436 aa18.63■□□□□ 0.57
FGFR1-215ENST00000464163 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
FGFR1-215ENST00000464163 KIF21BO75037 1637 aa18.59■□□□□ 0.57
FGFR1-215ENST00000464163 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
FGFR1-215ENST00000464163 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms