RNA–Protein interactions for RNA: ENST00000464157.1

ABCA2-210, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 445 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-210ENST00000464157 NISCHQ9Y2I1 1504 aa38.88■■■■□ 3.81
ABCA2-210ENST00000464157 ABCC9O60706 1549 aa34.86■■■■□ 3.17
ABCA2-210ENST00000464157 CCDC180Q9P1Z9 1646 aa34.83■■■■□ 3.17
ABCA2-210ENST00000464157 RB1CC1Q8TDY2 1594 aa33.12■■■□□ 2.89
ABCA2-210ENST00000464157 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
ABCA2-210ENST00000464157 NACADO15069 1562 aa32.87■■■□□ 2.85
ABCA2-210ENST00000464157 DNAJC5BQ9UF47 199 aa32.66■■■□□ 2.82
ABCA2-210ENST00000464157 UNC13AQ9UPW8 1703 aa32.55■■■□□ 2.8
ABCA2-210ENST00000464157 PABPN1Q86U42 306 aaKnown RBP eCLIP32.5■■■□□ 2.79
ABCA2-210ENST00000464157 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
ABCA2-210ENST00000464157 BICRAQ9NZM4 1560 aa32.22■■■□□ 2.75
ABCA2-210ENST00000464157 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
ABCA2-210ENST00000464157 DCAF1Q9Y4B6 1507 aa32.01■■■□□ 2.72
ABCA2-210ENST00000464157 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
ABCA2-210ENST00000464157 SHROOM4Q9ULL8 1493 aa31.57■■■□□ 2.64
ABCA2-210ENST00000464157 CC2D2AQ9P2K1 1620 aa31.47■■■□□ 2.63
ABCA2-210ENST00000464157 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.61
ABCA2-210ENST00000464157 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
ABCA2-210ENST00000464157 SMARCA4P51532 1647 aa30.34■■■□□ 2.45
ABCA2-210ENST00000464157 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
ABCA2-210ENST00000464157 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
ABCA2-210ENST00000464157 SMARCA2P51531 1590 aa30.2■■■□□ 2.42
ABCA2-210ENST00000464157 BAZ1AQ9NRL2 1556 aaPredicted RBP30.15■■■□□ 2.42
ABCA2-210ENST00000464157 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
ABCA2-210ENST00000464157 ERCC6Q03468 1493 aa30.03■■■□□ 2.4
ABCA2-210ENST00000464157 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
ABCA2-210ENST00000464157 MROH2BQ7Z745 1585 aa30.03■■■□□ 2.4
ABCA2-210ENST00000464157 NESP48681 1621 aa30■■■□□ 2.39
ABCA2-210ENST00000464157 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
ABCA2-210ENST00000464157 CUX2O14529 1486 aa29.86■■■□□ 2.37
ABCA2-210ENST00000464157 DNAJC5Q9H3Z4 198 aa29.81■■■□□ 2.36
ABCA2-210ENST00000464157 WIZO95785 1651 aa29.72■■■□□ 2.35
ABCA2-210ENST00000464157 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
ABCA2-210ENST00000464157 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
ABCA2-210ENST00000464157 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
ABCA2-210ENST00000464157 PDS5BQ9NTI5 1447 aa29.47■■■□□ 2.31
ABCA2-210ENST00000464157 CADPSQ9ULU8 1353 aa29.45■■■□□ 2.31
ABCA2-210ENST00000464157 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
ABCA2-210ENST00000464157 MRC2Q9UBG0 1479 aa29.25■■■□□ 2.27
ABCA2-210ENST00000464157 TOP2AP11388 1531 aaKnown RBP29.24■■■□□ 2.27
ABCA2-210ENST00000464157 WDR62O43379 1518 aa29.17■■■□□ 2.26
ABCA2-210ENST00000464157 CEP164Q9UPV0 1460 aa29.17■■■□□ 2.26
ABCA2-210ENST00000464157 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
ABCA2-210ENST00000464157 CFTRP13569 1480 aa29.12■■■□□ 2.25
ABCA2-210ENST00000464157 PRDM2Q13029 1718 aa28.96■■■□□ 2.23
ABCA2-210ENST00000464157 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.22
ABCA2-210ENST00000464157 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
ABCA2-210ENST00000464157 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
ABCA2-210ENST00000464157 TOPBP1Q92547 1522 aa28.63■■■□□ 2.17
ABCA2-210ENST00000464157 ZNF608Q9ULD9 1512 aaPredicted RBP28.59■■■□□ 2.17
ABCA2-210ENST00000464157 OSCARQ8IYS5 282 aa28.58■■■□□ 2.17
ABCA2-210ENST00000464157 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
ABCA2-210ENST00000464157 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
ABCA2-210ENST00000464157 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
ABCA2-210ENST00000464157 EIF4G3O43432 1585 aaKnown RBP28.42■■■□□ 2.14
ABCA2-210ENST00000464157 TARBP1Q13395 1621 aaKnown RBP28.38■■■□□ 2.13
ABCA2-210ENST00000464157 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.13
ABCA2-210ENST00000464157 POLA1P09884 1462 aaPredicted RBP28.33■■■□□ 2.13
ABCA2-210ENST00000464157 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
ABCA2-210ENST00000464157 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
ABCA2-210ENST00000464157 CHD1O14646 1710 aa28.28■■■□□ 2.12
ABCA2-210ENST00000464157 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
ABCA2-210ENST00000464157 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
ABCA2-210ENST00000464157 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
ABCA2-210ENST00000464157 SOGA1O94964 1423 aa28.21■■■□□ 2.11
ABCA2-210ENST00000464157 CUX1P39880 1505 aa28.19■■■□□ 2.1
ABCA2-210ENST00000464157 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
ABCA2-210ENST00000464157 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
ABCA2-210ENST00000464157 FBLN2P98095 1184 aa28.18■■■□□ 2.1
ABCA2-210ENST00000464157 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
ABCA2-210ENST00000464157 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
ABCA2-210ENST00000464157 WDR97A6NE52 1622 aa28■■■□□ 2.07
ABCA2-210ENST00000464157 CYB5RLQ6IPT4 315 aa27.98■■■□□ 2.07
ABCA2-210ENST00000464157 PBRM1Q86U86 1689 aa27.93■■■□□ 2.06
ABCA2-210ENST00000464157 GRIN2BQ13224 1484 aa27.91■■■□□ 2.06
ABCA2-210ENST00000464157 CHMP7Q8WUX9 453 aaPredicted RBP27.91■■■□□ 2.06
ABCA2-210ENST00000464157 ARAP1Q96P48 1450 aa27.88■■■□□ 2.05
ABCA2-210ENST00000464157 MAGI1Q96QZ7 1491 aaPredicted RBP27.88■■■□□ 2.05
ABCA2-210ENST00000464157 GAPVD1Q14C86 1478 aa27.86■■■□□ 2.05
ABCA2-210ENST00000464157 CLASP1Q7Z460 1538 aa27.83■■■□□ 2.05
ABCA2-210ENST00000464157 ABCA10Q8WWZ4 1543 aa27.82■■■□□ 2.04
ABCA2-210ENST00000464157 SYNJ2O15056 1496 aa27.81■■■□□ 2.04
ABCA2-210ENST00000464157 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
ABCA2-210ENST00000464157 ABCA5Q8WWZ7 1642 aa27.81■■■□□ 2.04
ABCA2-210ENST00000464157 BIVM-ERCC5R4GMW8 1640 aa27.75■■■□□ 2.03
ABCA2-210ENST00000464157 TOP2BQ02880 1626 aa27.73■■■□□ 2.03
ABCA2-210ENST00000464157 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.03
ABCA2-210ENST00000464157 TRHP20396 242 aaPredicted RBP27.65■■■□□ 2.02
ABCA2-210ENST00000464157 ADAMTS12P58397 1594 aa27.6■■■□□ 2.01
ABCA2-210ENST00000464157 GRIN2AQ12879 1464 aa27.57■■■□□ 2
ABCA2-210ENST00000464157 CEP170Q5SW79 1584 aa27.53■■■□□ 2
ABCA2-210ENST00000464157 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
ABCA2-210ENST00000464157 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
ABCA2-210ENST00000464157 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
ABCA2-210ENST00000464157 NUP160Q12769 1436 aa27.44■■□□□ 1.98
ABCA2-210ENST00000464157 SHROOM2Q13796 1616 aa27.36■■□□□ 1.97
ABCA2-210ENST00000464157 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
ABCA2-210ENST00000464157 JPH4Q96JJ6 628 aa27.22■■□□□ 1.95
ABCA2-210ENST00000464157 RUSC2Q8N2Y8 1516 aa27.21■■□□□ 1.95
ABCA2-210ENST00000464157 IGF1RP08069 1367 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms