RNA–Protein interactions for RNA: ENST00000464076.3

RAB3A-202, Transcript of RAB3A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB3A, Length 1,253 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-202ENST00000464076 NISCHQ9Y2I1 1504 aa39.44■■■■□ 3.9
RAB3A-202ENST00000464076 ABCC9O60706 1549 aa36.29■■■■□ 3.4
RAB3A-202ENST00000464076 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
RAB3A-202ENST00000464076 DNAJC5BQ9UF47 199 aa34.58■■■■□ 3.13
RAB3A-202ENST00000464076 RB1CC1Q8TDY2 1594 aa34.22■■■■□ 3.07
RAB3A-202ENST00000464076 NACADO15069 1562 aa33.83■■■■□ 3.01
RAB3A-202ENST00000464076 PABPN1Q86U42 306 aaKnown RBP eCLIP33.74■■■□□ 2.99
RAB3A-202ENST00000464076 DCAF8L2P0C7V8 631 aa33.71■■■□□ 2.99
RAB3A-202ENST00000464076 UNC13AQ9UPW8 1703 aa33.44■■■□□ 2.94
RAB3A-202ENST00000464076 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
RAB3A-202ENST00000464076 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
RAB3A-202ENST00000464076 CECR2Q9BXF3 1484 aa32.73■■■□□ 2.83
RAB3A-202ENST00000464076 CC2D2AQ9P2K1 1620 aa32.71■■■□□ 2.83
RAB3A-202ENST00000464076 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
RAB3A-202ENST00000464076 ZCCHC6Q5VYS8 1495 aaKnown RBP32.54■■■□□ 2.8
RAB3A-202ENST00000464076 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
RAB3A-202ENST00000464076 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
RAB3A-202ENST00000464076 SCRIBQ14160 1630 aa32.48■■■□□ 2.79
RAB3A-202ENST00000464076 DNAJC5Q9H3Z4 198 aa32.17■■■□□ 2.74
RAB3A-202ENST00000464076 CUX2O14529 1486 aa31.46■■■□□ 2.63
RAB3A-202ENST00000464076 ERCC6Q03468 1493 aa31.38■■■□□ 2.61
RAB3A-202ENST00000464076 NCAPD3P42695 1498 aa31.25■■■□□ 2.59
RAB3A-202ENST00000464076 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
RAB3A-202ENST00000464076 NESP48681 1621 aa31■■■□□ 2.55
RAB3A-202ENST00000464076 SMARCA2P51531 1590 aa30.95■■■□□ 2.54
RAB3A-202ENST00000464076 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
RAB3A-202ENST00000464076 SMARCA4P51532 1647 aa30.89■■■□□ 2.54
RAB3A-202ENST00000464076 BAZ1BQ9UIG0 1483 aaKnown RBP30.76■■■□□ 2.52
RAB3A-202ENST00000464076 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
RAB3A-202ENST00000464076 BAZ1AQ9NRL2 1556 aaPredicted RBP30.65■■■□□ 2.5
RAB3A-202ENST00000464076 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
RAB3A-202ENST00000464076 TRIM41Q8WV44 630 aa30.6■■■□□ 2.49
RAB3A-202ENST00000464076 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
RAB3A-202ENST00000464076 PEG3Q9GZU2 1588 aa30.55■■■□□ 2.48
RAB3A-202ENST00000464076 PDS5BQ9NTI5 1447 aa30.51■■■□□ 2.47
RAB3A-202ENST00000464076 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
RAB3A-202ENST00000464076 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
RAB3A-202ENST00000464076 MRC2Q9UBG0 1479 aa30.27■■■□□ 2.44
RAB3A-202ENST00000464076 WDR62O43379 1518 aa30.19■■■□□ 2.42
RAB3A-202ENST00000464076 CEP164Q9UPV0 1460 aa30.04■■■□□ 2.4
RAB3A-202ENST00000464076 WIZO95785 1651 aa30.02■■■□□ 2.4
RAB3A-202ENST00000464076 OSCARQ8IYS5 282 aa30■■■□□ 2.39
RAB3A-202ENST00000464076 FANCD2Q9BXW9 1451 aa29.96■■■□□ 2.39
RAB3A-202ENST00000464076 CFTRP13569 1480 aa29.8■■■□□ 2.36
RAB3A-202ENST00000464076 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
RAB3A-202ENST00000464076 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
RAB3A-202ENST00000464076 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
RAB3A-202ENST00000464076 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
RAB3A-202ENST00000464076 TOP2AP11388 1531 aaKnown RBP29.56■■■□□ 2.32
RAB3A-202ENST00000464076 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
RAB3A-202ENST00000464076 ZNF608Q9ULD9 1512 aaPredicted RBP29.49■■■□□ 2.31
RAB3A-202ENST00000464076 ARHGEF11O15085 1522 aa29.47■■■□□ 2.31
RAB3A-202ENST00000464076 IFT140Q96RY7 1462 aa29.45■■■□□ 2.31
RAB3A-202ENST00000464076 PRDM2Q13029 1718 aa29.42■■■□□ 2.3
RAB3A-202ENST00000464076 CYB5RLQ6IPT4 315 aa29.37■■■□□ 2.29
RAB3A-202ENST00000464076 TOPBP1Q92547 1522 aa29.31■■■□□ 2.28
RAB3A-202ENST00000464076 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
RAB3A-202ENST00000464076 EIF4G3O43432 1585 aaKnown RBP29.26■■■□□ 2.28
RAB3A-202ENST00000464076 TRHP20396 242 aaPredicted RBP29.26■■■□□ 2.27
RAB3A-202ENST00000464076 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
RAB3A-202ENST00000464076 CHD1O14646 1710 aa29.18■■■□□ 2.26
RAB3A-202ENST00000464076 FBLN2P98095 1184 aa29.17■■■□□ 2.26
RAB3A-202ENST00000464076 AQRO60306 1485 aaKnown RBP eCLIP29.17■■■□□ 2.26
RAB3A-202ENST00000464076 ARAP1Q96P48 1450 aa29.14■■■□□ 2.26
RAB3A-202ENST00000464076 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
RAB3A-202ENST00000464076 TARBP1Q13395 1621 aaKnown RBP29.08■■■□□ 2.25
RAB3A-202ENST00000464076 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
RAB3A-202ENST00000464076 RAD54L2Q9Y4B4 1467 aa28.92■■■□□ 2.22
RAB3A-202ENST00000464076 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
RAB3A-202ENST00000464076 SOGA1O94964 1423 aa28.87■■■□□ 2.21
RAB3A-202ENST00000464076 AEBP2Q6ZN18 517 aaPredicted RBP28.85■■■□□ 2.21
RAB3A-202ENST00000464076 SNAPC4Q5SXM2 1469 aa28.83■■■□□ 2.21
RAB3A-202ENST00000464076 CHMP7Q8WUX9 453 aaPredicted RBP28.81■■■□□ 2.2
RAB3A-202ENST00000464076 CLASP1Q7Z460 1538 aa28.8■■■□□ 2.2
RAB3A-202ENST00000464076 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
RAB3A-202ENST00000464076 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
RAB3A-202ENST00000464076 MAGI1Q96QZ7 1491 aaPredicted RBP28.7■■■□□ 2.18
RAB3A-202ENST00000464076 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
RAB3A-202ENST00000464076 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
RAB3A-202ENST00000464076 SYNJ2O15056 1496 aa28.63■■■□□ 2.17
RAB3A-202ENST00000464076 CUX1P39880 1505 aa28.59■■■□□ 2.17
RAB3A-202ENST00000464076 GAPVD1Q14C86 1478 aa28.58■■■□□ 2.17
RAB3A-202ENST00000464076 PBRM1Q86U86 1689 aa28.49■■■□□ 2.15
RAB3A-202ENST00000464076 ERCC6L2Q5T890 1561 aa28.36■■■□□ 2.13
RAB3A-202ENST00000464076 ABCA5Q8WWZ7 1642 aa28.34■■■□□ 2.13
RAB3A-202ENST00000464076 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
RAB3A-202ENST00000464076 GRIN2AQ12879 1464 aa28.28■■■□□ 2.12
RAB3A-202ENST00000464076 CEP170Q5SW79 1584 aa28.24■■■□□ 2.11
RAB3A-202ENST00000464076 NUP160Q12769 1436 aa28.19■■■□□ 2.1
RAB3A-202ENST00000464076 ADAMTS12P58397 1594 aa28.18■■■□□ 2.1
RAB3A-202ENST00000464076 WRNQ14191 1432 aaPredicted RBP eCLIP28.13■■■□□ 2.09
RAB3A-202ENST00000464076 SHROOM2Q13796 1616 aa28.12■■■□□ 2.09
RAB3A-202ENST00000464076 KIF13AQ9H1H9 1805 aa28.1■■■□□ 2.09
RAB3A-202ENST00000464076 FHAD1B1AJZ9 1412 aa28.09■■■□□ 2.09
RAB3A-202ENST00000464076 PRG4Q92954 1404 aaPredicted RBP28.02■■■□□ 2.08
RAB3A-202ENST00000464076 FAM69CQ0P6D2 419 aa27.97■■■□□ 2.07
RAB3A-202ENST00000464076 JPH4Q96JJ6 628 aa27.97■■■□□ 2.07
RAB3A-202ENST00000464076 ERICH3Q5RHP9 1530 aa27.97■■■□□ 2.07
RAB3A-202ENST00000464076 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
RAB3A-202ENST00000464076 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms