RNA–Protein interactions for RNA: ENST00000463785.1

TRMU-208, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 4

Gene TRMU, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-208ENST00000463785 NISCHQ9Y2I1 1504 aa39.34■■■■□ 3.89
TRMU-208ENST00000463785 CCDC180Q9P1Z9 1646 aa35.1■■■■□ 3.21
TRMU-208ENST00000463785 ABCC9O60706 1549 aa35.03■■■■□ 3.2
TRMU-208ENST00000463785 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
TRMU-208ENST00000463785 NACADO15069 1562 aa33.13■■■□□ 2.89
TRMU-208ENST00000463785 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
TRMU-208ENST00000463785 DNAJC5BQ9UF47 199 aa32.87■■■□□ 2.85
TRMU-208ENST00000463785 MYO15BQ96JP2 1530 aa32.74■■■□□ 2.83
TRMU-208ENST00000463785 UNC13AQ9UPW8 1703 aa32.72■■■□□ 2.83
TRMU-208ENST00000463785 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.83
TRMU-208ENST00000463785 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
TRMU-208ENST00000463785 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
TRMU-208ENST00000463785 DCAF1Q9Y4B6 1507 aa32.43■■■□□ 2.78
TRMU-208ENST00000463785 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
TRMU-208ENST00000463785 SHROOM4Q9ULL8 1493 aa31.82■■■□□ 2.68
TRMU-208ENST00000463785 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.65
TRMU-208ENST00000463785 EIF4G1Q04637 1599 aaKnown RBP31.6■■■□□ 2.65
TRMU-208ENST00000463785 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
TRMU-208ENST00000463785 NCAPD3P42695 1498 aa30.66■■■□□ 2.5
TRMU-208ENST00000463785 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
TRMU-208ENST00000463785 SMARCA4P51532 1647 aa30.63■■■□□ 2.49
TRMU-208ENST00000463785 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
TRMU-208ENST00000463785 SMARCA2P51531 1590 aa30.42■■■□□ 2.46
TRMU-208ENST00000463785 HMGXB3Q12766 1538 aa30.4■■■□□ 2.46
TRMU-208ENST00000463785 MROH2BQ7Z745 1585 aa30.39■■■□□ 2.46
TRMU-208ENST00000463785 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
TRMU-208ENST00000463785 BAZ1BQ9UIG0 1483 aaKnown RBP30.25■■■□□ 2.43
TRMU-208ENST00000463785 NESP48681 1621 aa30.23■■■□□ 2.43
TRMU-208ENST00000463785 ERCC6Q03468 1493 aa30.07■■■□□ 2.4
TRMU-208ENST00000463785 WIZO95785 1651 aa30.02■■■□□ 2.4
TRMU-208ENST00000463785 CUX2O14529 1486 aa29.96■■■□□ 2.39
TRMU-208ENST00000463785 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
TRMU-208ENST00000463785 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
TRMU-208ENST00000463785 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
TRMU-208ENST00000463785 THOC2Q8NI27 1593 aaKnown RBP29.81■■■□□ 2.36
TRMU-208ENST00000463785 KIF21AQ7Z4S6 1674 aa29.77■■■□□ 2.36
TRMU-208ENST00000463785 CADPSQ9ULU8 1353 aa29.72■■■□□ 2.35
TRMU-208ENST00000463785 PDS5BQ9NTI5 1447 aa29.64■■■□□ 2.34
TRMU-208ENST00000463785 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
TRMU-208ENST00000463785 CFTRP13569 1480 aa29.45■■■□□ 2.31
TRMU-208ENST00000463785 MRC2Q9UBG0 1479 aa29.44■■■□□ 2.3
TRMU-208ENST00000463785 WDR62O43379 1518 aa29.4■■■□□ 2.3
TRMU-208ENST00000463785 FANCD2Q9BXW9 1451 aa29.38■■■□□ 2.29
TRMU-208ENST00000463785 CEP164Q9UPV0 1460 aa29.34■■■□□ 2.29
TRMU-208ENST00000463785 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
TRMU-208ENST00000463785 URB2Q14146 1524 aaKnown RBP29.21■■■□□ 2.27
TRMU-208ENST00000463785 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
TRMU-208ENST00000463785 TOPBP1Q92547 1522 aa28.89■■■□□ 2.21
TRMU-208ENST00000463785 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
TRMU-208ENST00000463785 DNMBPQ6XZF7 1577 aa28.75■■■□□ 2.19
TRMU-208ENST00000463785 IFT140Q96RY7 1462 aa28.74■■■□□ 2.19
TRMU-208ENST00000463785 ABCC8Q09428 1581 aa28.67■■■□□ 2.18
TRMU-208ENST00000463785 OSCARQ8IYS5 282 aa28.65■■■□□ 2.18
TRMU-208ENST00000463785 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
TRMU-208ENST00000463785 POLA1P09884 1462 aaPredicted RBP28.61■■■□□ 2.17
TRMU-208ENST00000463785 EIF4G3O43432 1585 aaKnown RBP28.6■■■□□ 2.17
TRMU-208ENST00000463785 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
TRMU-208ENST00000463785 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.17
TRMU-208ENST00000463785 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
TRMU-208ENST00000463785 RAD54L2Q9Y4B4 1467 aa28.56■■■□□ 2.16
TRMU-208ENST00000463785 CUX1P39880 1505 aa28.52■■■□□ 2.16
TRMU-208ENST00000463785 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
TRMU-208ENST00000463785 SOGA1O94964 1423 aa28.44■■■□□ 2.14
TRMU-208ENST00000463785 TDRD9Q8NDG6 1382 aaKnown RBP28.42■■■□□ 2.14
TRMU-208ENST00000463785 CHD1O14646 1710 aa28.37■■■□□ 2.13
TRMU-208ENST00000463785 RIMBP3CA6NJZ7 1639 aa28.35■■■□□ 2.13
TRMU-208ENST00000463785 RIMBP3BA6NNM3 1639 aa28.35■■■□□ 2.13
TRMU-208ENST00000463785 RIMBP3Q9UFD9 1639 aa28.35■■■□□ 2.13
TRMU-208ENST00000463785 ARHGEF11O15085 1522 aa28.27■■■□□ 2.12
TRMU-208ENST00000463785 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
TRMU-208ENST00000463785 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
TRMU-208ENST00000463785 FBLN2P98095 1184 aa28.23■■■□□ 2.11
TRMU-208ENST00000463785 GRIN2BQ13224 1484 aa28.13■■■□□ 2.09
TRMU-208ENST00000463785 ABCA10Q8WWZ4 1543 aa28.12■■■□□ 2.09
TRMU-208ENST00000463785 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
TRMU-208ENST00000463785 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
TRMU-208ENST00000463785 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
TRMU-208ENST00000463785 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
TRMU-208ENST00000463785 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
TRMU-208ENST00000463785 CLASP1Q7Z460 1538 aa28.07■■■□□ 2.08
TRMU-208ENST00000463785 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
TRMU-208ENST00000463785 BIVM-ERCC5R4GMW8 1640 aa28.04■■■□□ 2.08
TRMU-208ENST00000463785 CYB5RLQ6IPT4 315 aa28.04■■■□□ 2.08
TRMU-208ENST00000463785 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
TRMU-208ENST00000463785 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
TRMU-208ENST00000463785 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
TRMU-208ENST00000463785 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
TRMU-208ENST00000463785 ADAMTS12P58397 1594 aa27.84■■■□□ 2.05
TRMU-208ENST00000463785 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
TRMU-208ENST00000463785 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
TRMU-208ENST00000463785 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
TRMU-208ENST00000463785 NUP160Q12769 1436 aa27.74■■■□□ 2.03
TRMU-208ENST00000463785 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
TRMU-208ENST00000463785 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
TRMU-208ENST00000463785 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
TRMU-208ENST00000463785 TRHP20396 242 aaPredicted RBP27.56■■■□□ 2
TRMU-208ENST00000463785 IGF1RP08069 1367 aa27.53■■■□□ 2
TRMU-208ENST00000463785 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
TRMU-208ENST00000463785 JPH4Q96JJ6 628 aa27.43■■□□□ 1.98
TRMU-208ENST00000463785 PRG4Q92954 1404 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms