RNA–Protein interactions for RNA: ENST00000463777.5

PLSCR1-204, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-204ENST00000463777 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
PLSCR1-204ENST00000463777 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
PLSCR1-204ENST00000463777 ABCC9O60706 1549 aa29.18■■■□□ 2.26
PLSCR1-204ENST00000463777 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
PLSCR1-204ENST00000463777 NACADO15069 1562 aa27.83■■■□□ 2.05
PLSCR1-204ENST00000463777 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
PLSCR1-204ENST00000463777 ZCCHC6Q5VYS8 1495 aaKnown RBP27.67■■■□□ 2.02
PLSCR1-204ENST00000463777 MYO15BQ96JP2 1530 aa27.6■■■□□ 2.01
PLSCR1-204ENST00000463777 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.98
PLSCR1-204ENST00000463777 UNC13AQ9UPW8 1703 aa27.32■■□□□ 1.96
PLSCR1-204ENST00000463777 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.95
PLSCR1-204ENST00000463777 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
PLSCR1-204ENST00000463777 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
PLSCR1-204ENST00000463777 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
PLSCR1-204ENST00000463777 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
PLSCR1-204ENST00000463777 EIF4G1Q04637 1599 aaKnown RBP26.42■■□□□ 1.82
PLSCR1-204ENST00000463777 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
PLSCR1-204ENST00000463777 CECR2Q9BXF3 1484 aa26.2■■□□□ 1.78
PLSCR1-204ENST00000463777 SMARCA4P51532 1647 aa25.83■■□□□ 1.73
PLSCR1-204ENST00000463777 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
PLSCR1-204ENST00000463777 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
PLSCR1-204ENST00000463777 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
PLSCR1-204ENST00000463777 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
PLSCR1-204ENST00000463777 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
PLSCR1-204ENST00000463777 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
PLSCR1-204ENST00000463777 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
PLSCR1-204ENST00000463777 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
PLSCR1-204ENST00000463777 WIZO95785 1651 aa25.36■■□□□ 1.65
PLSCR1-204ENST00000463777 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
PLSCR1-204ENST00000463777 NESP48681 1621 aa25.23■■□□□ 1.63
PLSCR1-204ENST00000463777 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
PLSCR1-204ENST00000463777 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
PLSCR1-204ENST00000463777 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
PLSCR1-204ENST00000463777 CADPSQ9ULU8 1353 aa24.96■■□□□ 1.59
PLSCR1-204ENST00000463777 CUX2O14529 1486 aa24.87■■□□□ 1.57
PLSCR1-204ENST00000463777 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
PLSCR1-204ENST00000463777 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
PLSCR1-204ENST00000463777 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
PLSCR1-204ENST00000463777 CFTRP13569 1480 aa24.79■■□□□ 1.56
PLSCR1-204ENST00000463777 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
PLSCR1-204ENST00000463777 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.54
PLSCR1-204ENST00000463777 MRC2Q9UBG0 1479 aa24.66■■□□□ 1.54
PLSCR1-204ENST00000463777 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
PLSCR1-204ENST00000463777 WDR62O43379 1518 aa24.6■■□□□ 1.53
PLSCR1-204ENST00000463777 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
PLSCR1-204ENST00000463777 SUPT5HO00267 1087 aaKnown RBP24.51■■□□□ 1.51
PLSCR1-204ENST00000463777 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
PLSCR1-204ENST00000463777 DNAJC5Q9H3Z4 198 aa24.32■■□□□ 1.48
PLSCR1-204ENST00000463777 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
PLSCR1-204ENST00000463777 DNMBPQ6XZF7 1577 aa24.22■■□□□ 1.47
PLSCR1-204ENST00000463777 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
PLSCR1-204ENST00000463777 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
PLSCR1-204ENST00000463777 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
PLSCR1-204ENST00000463777 CUX1P39880 1505 aa24.08■■□□□ 1.45
PLSCR1-204ENST00000463777 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
PLSCR1-204ENST00000463777 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
PLSCR1-204ENST00000463777 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
PLSCR1-204ENST00000463777 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
PLSCR1-204ENST00000463777 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
PLSCR1-204ENST00000463777 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.423e-7■■■□□ 16
PLSCR1-204ENST00000463777 SOGA1O94964 1423 aa23.94■■□□□ 1.42
PLSCR1-204ENST00000463777 TDRD9Q8NDG6 1382 aaKnown RBP23.87■■□□□ 1.41
PLSCR1-204ENST00000463777 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
PLSCR1-204ENST00000463777 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
PLSCR1-204ENST00000463777 WDR97A6NE52 1622 aa23.8■■□□□ 1.4
PLSCR1-204ENST00000463777 OSCARQ8IYS5 282 aa23.79■■□□□ 1.4
PLSCR1-204ENST00000463777 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
PLSCR1-204ENST00000463777 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
PLSCR1-204ENST00000463777 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
PLSCR1-204ENST00000463777 SNAPC4Q5SXM2 1469 aa23.72■■□□□ 1.39
PLSCR1-204ENST00000463777 CHD1O14646 1710 aa23.69■■□□□ 1.38
PLSCR1-204ENST00000463777 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
PLSCR1-204ENST00000463777 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
PLSCR1-204ENST00000463777 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
PLSCR1-204ENST00000463777 FBLN2P98095 1184 aa23.64■■□□□ 1.37
PLSCR1-204ENST00000463777 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
PLSCR1-204ENST00000463777 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
PLSCR1-204ENST00000463777 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
PLSCR1-204ENST00000463777 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
PLSCR1-204ENST00000463777 RIMBP3CA6NJZ7 1639 aa23.51■■□□□ 1.35
PLSCR1-204ENST00000463777 RIMBP3BA6NNM3 1639 aa23.51■■□□□ 1.35
PLSCR1-204ENST00000463777 RIMBP3Q9UFD9 1639 aa23.51■■□□□ 1.35
PLSCR1-204ENST00000463777 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
PLSCR1-204ENST00000463777 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
PLSCR1-204ENST00000463777 ADAMTS12P58397 1594 aa23.46■■□□□ 1.35
PLSCR1-204ENST00000463777 CLASP1Q7Z460 1538 aa23.46■■□□□ 1.35
PLSCR1-204ENST00000463777 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
PLSCR1-204ENST00000463777 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
PLSCR1-204ENST00000463777 FHAD1B1AJZ9 1412 aa23.38■■□□□ 1.33
PLSCR1-204ENST00000463777 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
PLSCR1-204ENST00000463777 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
PLSCR1-204ENST00000463777 NUP160Q12769 1436 aa23.31■■□□□ 1.32
PLSCR1-204ENST00000463777 KIF27Q86VH2 1401 aa23.3■■□□□ 1.32
PLSCR1-204ENST00000463777 IGF1RP08069 1367 aa23.27■■□□□ 1.32
PLSCR1-204ENST00000463777 CYB5RLQ6IPT4 315 aa23.25■■□□□ 1.31
PLSCR1-204ENST00000463777 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
PLSCR1-204ENST00000463777 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
PLSCR1-204ENST00000463777 CUL7Q14999 1698 aa23.16■■□□□ 1.3
PLSCR1-204ENST00000463777 SHROOM2Q13796 1616 aa23.14■■□□□ 1.29
PLSCR1-204ENST00000463777 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms