RNA–Protein interactions for RNA: ENST00000462957.1

PSMB1-202, Transcript of proteasome subunit beta 1, humanhuman

TSL 2

Gene PSMB1, Length 1,939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB1-202ENST00000462957 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.18
PSMB1-202ENST00000462957 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
PSMB1-202ENST00000462957 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
PSMB1-202ENST00000462957 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
PSMB1-202ENST00000462957 FOXD1Q16676 465 aa11.13□□□□□ -0.63
PSMB1-202ENST00000462957 PLPPR3Q6T4P5 718 aa10.65□□□□□ -0.7
PSMB1-202ENST00000462957 MSH5O43196 834 aa10.49□□□□□ -0.73
PSMB1-202ENST00000462957 PIAS4Q8N2W9 510 aaPredicted RBP10.41□□□□□ -0.74
PSMB1-202ENST00000462957 PPP6R1Q9UPN7 881 aa10.36□□□□□ -0.75
PSMB1-202ENST00000462957 ADRA2BP18089 450 aa10.33□□□□□ -0.76
PSMB1-202ENST00000462957 POTEDQ86YR6 584 aa10.19□□□□□ -0.78
PSMB1-202ENST00000462957 PELP1Q8IZL8 1130 aaKnown RBP9.78□□□□□ -0.84
PSMB1-202ENST00000462957 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
PSMB1-202ENST00000462957 MYT1Q01538 1121 aa9.72□□□□□ -0.85
PSMB1-202ENST00000462957 SCAF1Q9H7N4 1312 aaKnown RBP9.58□□□□□ -0.88
PSMB1-202ENST00000462957 DMRT2Q9Y5R5 561 aa9.5□□□□□ -0.89
PSMB1-202ENST00000462957 MAPK8IP2Q13387 824 aaPredicted RBP9.48□□□□□ -0.89
PSMB1-202ENST00000462957 TTBK1Q5TCY1 1321 aaPredicted RBP9.45□□□□□ -0.9
PSMB1-202ENST00000462957 PPP4R3CPQ6ZMV5 832 aa9.31□□□□□ -0.92
PSMB1-202ENST00000462957 SLC24A1O60721 1099 aa9.17□□□□□ -0.94
PSMB1-202ENST00000462957 CNKSR2Q8WXI2 1034 aa9.17□□□□□ -0.94
PSMB1-202ENST00000462957 HOXD11P31277 338 aaPredicted RBP9.15□□□□□ -0.94
PSMB1-202ENST00000462957 PRKCSHP14314 528 aaPredicted RBP9.12□□□□□ -0.95
PSMB1-202ENST00000462957 RNF216Q9NWF9 866 aaPredicted RBP9.09□□□□□ -0.95
PSMB1-202ENST00000462957 DCAF8L1A6NGE4 600 aa9.07□□□□□ -0.96
PSMB1-202ENST00000462957 APLP2Q06481 763 aa9.01□□□□□ -0.97
PSMB1-202ENST00000462957 NCBP3Q53F19 620 aaKnown RBP9.01□□□□□ -0.97
PSMB1-202ENST00000462957 ERICH6Q7L0X2 663 aa9.01□□□□□ -0.97
PSMB1-202ENST00000462957 CACNB1Q02641 598 aaPredicted RBP8.98□□□□□ -0.97
PSMB1-202ENST00000462957 RNF39Q9H2S5 420 aa8.91□□□□□ -0.98
PSMB1-202ENST00000462957 DNAJC5BQ9UF47 199 aa8.91□□□□□ -0.98
PSMB1-202ENST00000462957 C1QBPQ07021 282 aaKnown RBP8.82□□□□□ -1
PSMB1-202ENST00000462957 NPM3O75607 178 aaKnown RBP8.8□□□□□ -1
PSMB1-202ENST00000462957 BCL11AQ9H165 835 aa8.76□□□□□ -1.01
PSMB1-202ENST00000462957 DAXXQ9UER7 740 aaPredicted RBP8.75□□□□□ -1.01
PSMB1-202ENST00000462957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.71□□□□□ -1.021e-7■□□□□ 9.4
PSMB1-202ENST00000462957 HRCP23327 699 aa8.7□□□□□ -1.02
PSMB1-202ENST00000462957 ABCC9O60706 1549 aa8.67□□□□□ -1.02
PSMB1-202ENST00000462957 FAM9AQ8IZU1 332 aaPredicted RBP8.62□□□□□ -1.03
PSMB1-202ENST00000462957 KCNA4P22459 653 aa8.58□□□□□ -1.04
PSMB1-202ENST00000462957 CCDC180Q9P1Z9 1646 aa8.5□□□□□ -1.05
PSMB1-202ENST00000462957 U3KPZ7 1027 aaPredicted RBP8.49□□□□□ -1.05
PSMB1-202ENST00000462957 EIF5BO60841 1220 aaKnown RBP8.44□□□□□ -1.06
PSMB1-202ENST00000462957 CENPBP07199 599 aaPredicted RBP8.43□□□□□ -1.06
PSMB1-202ENST00000462957 SLC4A2P04920 1241 aa8.39□□□□□ -1.07
PSMB1-202ENST00000462957 CAPN15O75808 1086 aa8.38□□□□□ -1.07
PSMB1-202ENST00000462957 SPINK5Q9NQ38 1064 aaPredicted RBP8.35□□□□□ -1.07
PSMB1-202ENST00000462957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.35□□□□□ -1.07
PSMB1-202ENST00000462957 HNRNPUL2Q1KMD3 747 aaKnown RBP8.35□□□□□ -1.07
PSMB1-202ENST00000462957 DSG3P32926 999 aa8.33□□□□□ -1.08
PSMB1-202ENST00000462957 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
PSMB1-202ENST00000462957 SAMD1Q6SPF0 538 aaPredicted RBP8.27□□□□□ -1.09
PSMB1-202ENST00000462957 ZNF219Q9P2Y4 722 aaPredicted RBP8.27□□□□□ -1.09
PSMB1-202ENST00000462957 ZCCHC6Q5VYS8 1495 aaKnown RBP8.26□□□□□ -1.09
PSMB1-202ENST00000462957 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
PSMB1-202ENST00000462957 ANP32EQ9BTT0 268 aa8.23□□□□□ -1.09
PSMB1-202ENST00000462957 TRHP20396 242 aaPredicted RBP8.23□□□□□ -1.09
PSMB1-202ENST00000462957 UBE2Q2Q8WVN8 375 aa8.21□□□□□ -1.09
PSMB1-202ENST00000462957 ACIN1Q9UKV3 1341 aaKnown RBP8.21□□□□□ -1.1
PSMB1-202ENST00000462957 SUPT5HO00267 1087 aaKnown RBP8.18□□□□□ -1.1
PSMB1-202ENST00000462957 PLEKHG5O94827 1062 aa8.18□□□□□ -1.1
PSMB1-202ENST00000462957 MYCNP04198 464 aaPredicted RBP8.18□□□□□ -1.1
PSMB1-202ENST00000462957 RB1CC1Q8TDY2 1594 aa8.18□□□□□ -1.1
PSMB1-202ENST00000462957 ABCB7O75027 752 aa8.14□□□□□ -1.11
PSMB1-202ENST00000462957 SLC4A1APQ9BWU0 796 aaKnown RBP8.14□□□□□ -1.11
PSMB1-202ENST00000462957 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
PSMB1-202ENST00000462957 NACADO15069 1562 aa8.1□□□□□ -1.11
PSMB1-202ENST00000462957 CSRNP3Q8WYN3 585 aa8.09□□□□□ -1.11
PSMB1-202ENST00000462957 PODXL2Q9NZ53 605 aa8.09□□□□□ -1.11
PSMB1-202ENST00000462957 NEUROD1Q13562 356 aa8.07□□□□□ -1.12
PSMB1-202ENST00000462957 FOXD4L1Q9NU39 408 aa8.07□□□□□ -1.12
PSMB1-202ENST00000462957 ANO8Q9HCE9 1232 aaPredicted RBP8.05□□□□□ -1.12
PSMB1-202ENST00000462957 PABPN1Q86U42 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
PSMB1-202ENST00000462957 DCAF1Q9Y4B6 1507 aa8.04□□□□□ -1.12
PSMB1-202ENST00000462957 MYO15BQ96JP2 1530 aa8.03□□□□□ -1.12
PSMB1-202ENST00000462957 ZEB1P37275 1124 aaPredicted RBP8.03□□□□□ -1.12
PSMB1-202ENST00000462957 BICRAQ9NZM4 1560 aa8.02□□□□□ -1.13
PSMB1-202ENST00000462957 POLA2Q14181 598 aa8.01□□□□□ -1.13
PSMB1-202ENST00000462957 PKNOX2Q96KN3 472 aa8.01□□□□□ -1.13
PSMB1-202ENST00000462957 RBM42Q9BTD8 480 aaKnown RBP8.01□□□□□ -1.13
PSMB1-202ENST00000462957 ARXQ96QS3 562 aa8.01□□□□□ -1.13
PSMB1-202ENST00000462957 POTEHQ6S545 545 aa8□□□□□ -1.13
PSMB1-202ENST00000462957 RANGAP1P46060 587 aaPredicted RBP7.97□□□□□ -1.13
PSMB1-202ENST00000462957 PCGF6Q9BYE7 350 aa7.97□□□□□ -1.13
PSMB1-202ENST00000462957 UNC13AQ9UPW8 1703 aa7.97□□□□□ -1.13
PSMB1-202ENST00000462957 ZBTB12Q9Y330 459 aaPredicted RBP7.93□□□□□ -1.14
PSMB1-202ENST00000462957 DCAF8L2P0C7V8 631 aa7.91□□□□□ -1.14
PSMB1-202ENST00000462957 ATF5Q9Y2D1 282 aaPredicted RBP7.91□□□□□ -1.14
PSMB1-202ENST00000462957 ERICH6BQ5W0A0 696 aa7.9□□□□□ -1.15
PSMB1-202ENST00000462957 KLHL34Q8N239 644 aa7.9□□□□□ -1.15
PSMB1-202ENST00000462957 ATXN8OSP0DMR3 200 aa7.88□□□□□ -1.15
PSMB1-202ENST00000462957 NEFLP07196 543 aa7.87□□□□□ -1.15
PSMB1-202ENST00000462957 DNAJC5Q9H3Z4 198 aa7.87□□□□□ -1.15
PSMB1-202ENST00000462957 ZBTB22O15209 634 aa7.86□□□□□ -1.15
PSMB1-202ENST00000462957 CECR2Q9BXF3 1484 aa7.86□□□□□ -1.15
PSMB1-202ENST00000462957 SALL2Q9Y467 1007 aaPredicted RBP7.84□□□□□ -1.15
PSMB1-202ENST00000462957 CC2D2AQ9P2K1 1620 aa7.84□□□□□ -1.15
PSMB1-202ENST00000462957 PDIA4P13667 645 aaKnown RBP7.83□□□□□ -1.16
PSMB1-202ENST00000462957 MYT1LQ9UL68 1186 aa7.82□□□□□ -1.16
PSMB1-202ENST00000462957 AKT1S1Q96B36 256 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms