RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 NISCHQ9Y2I1 1504 aa56.4■■■■■ 6.62
LIMK2-206ENST00000462625 CCDC180Q9P1Z9 1646 aa50.29■■■■■ 5.64
LIMK2-206ENST00000462625 ABCC9O60706 1549 aa49.31■■■■■ 5.48
LIMK2-206ENST00000462625 RB1CC1Q8TDY2 1594 aa47.44■■■■■ 5.18
LIMK2-206ENST00000462625 NACADO15069 1562 aa47.32■■■■■ 5.17
LIMK2-206ENST00000462625 DCAF8L2P0C7V8 631 aa47.28■■■■■ 5.16
LIMK2-206ENST00000462625 MYO15BQ96JP2 1530 aa46.95■■■■■ 5.11
LIMK2-206ENST00000462625 ZCCHC6Q5VYS8 1495 aaKnown RBP46.92■■■■■ 5.1
LIMK2-206ENST00000462625 DCAF1Q9Y4B6 1507 aa46.68■■■■■ 5.06
LIMK2-206ENST00000462625 UNC13AQ9UPW8 1703 aa46.36■■■■■ 5.01
LIMK2-206ENST00000462625 PABPN1Q86U42 306 aaKnown RBP eCLIP46.03■■■■■ 4.96
LIMK2-206ENST00000462625 BICRAQ9NZM4 1560 aa45.89■■■■■ 4.94
LIMK2-206ENST00000462625 SCRIBQ14160 1630 aa45.83■■■■■ 4.93
LIMK2-206ENST00000462625 SHROOM4Q9ULL8 1493 aa45.49■■■■■ 4.87
LIMK2-206ENST00000462625 DNAJC5BQ9UF47 199 aa45.33■■■■■ 4.85
LIMK2-206ENST00000462625 EIF4G1Q04637 1599 aaKnown RBP44.74■■■■■ 4.75
LIMK2-206ENST00000462625 CC2D2AQ9P2K1 1620 aa44.63■■■■■ 4.73
LIMK2-206ENST00000462625 CECR2Q9BXF3 1484 aa44.34■■■■■ 4.69
LIMK2-206ENST00000462625 SMARCA4P51532 1647 aa43.82■■■■■ 4.61
LIMK2-206ENST00000462625 BAZ1AQ9NRL2 1556 aaPredicted RBP43.77■■■■■ 4.6
LIMK2-206ENST00000462625 NCAPD3P42695 1498 aa43.61■■■■■ 4.57
LIMK2-206ENST00000462625 SMARCA2P51531 1590 aa43.61■■■■■ 4.57
LIMK2-206ENST00000462625 ATAD2BQ9ULI0 1458 aa43.6■■■■■ 4.57
LIMK2-206ENST00000462625 MROH2BQ7Z745 1585 aa43.43■■■■■ 4.54
LIMK2-206ENST00000462625 HMGXB3Q12766 1538 aa43.4■■■■■ 4.54
LIMK2-206ENST00000462625 PEG3Q9GZU2 1588 aa43.38■■■■■ 4.54
LIMK2-206ENST00000462625 BAZ1BQ9UIG0 1483 aaKnown RBP43.27■■■■■ 4.52
LIMK2-206ENST00000462625 WIZO95785 1651 aa43.01■■■■■ 4.48
LIMK2-206ENST00000462625 RSF1Q96T23 1441 aaPredicted RBP42.87■■■■■ 4.45
LIMK2-206ENST00000462625 ERCC6Q03468 1493 aa42.59■■■■■ 4.41
LIMK2-206ENST00000462625 NESP48681 1621 aa42.58■■■■■ 4.41
LIMK2-206ENST00000462625 LAMC3Q9Y6N6 1575 aa42.56■■■■■ 4.4
LIMK2-206ENST00000462625 TOP2AP11388 1531 aaKnown RBP42.53■■■■■ 4.4
LIMK2-206ENST00000462625 CADPSQ9ULU8 1353 aa42.35■■■■■ 4.37
LIMK2-206ENST00000462625 PDS5BQ9NTI5 1447 aa42.28■■■■■ 4.36
LIMK2-206ENST00000462625 CUX2O14529 1486 aa42.17■■■■■ 4.34
LIMK2-206ENST00000462625 KIF21AQ7Z4S6 1674 aa42.16■■■■■ 4.34
LIMK2-206ENST00000462625 CFTRP13569 1480 aa42.04■■■■■ 4.32
LIMK2-206ENST00000462625 CCDC88BA6NC98 1476 aa42.02■■■■■ 4.32
LIMK2-206ENST00000462625 THOC2Q8NI27 1593 aaKnown RBP42.01■■■■■ 4.32
LIMK2-206ENST00000462625 FANCD2Q9BXW9 1451 aa41.87■■■■■ 4.29
LIMK2-206ENST00000462625 CEP164Q9UPV0 1460 aa41.85■■■■■ 4.29
LIMK2-206ENST00000462625 PRDM2Q13029 1718 aa41.84■■■■■ 4.29
LIMK2-206ENST00000462625 MRC2Q9UBG0 1479 aa41.81■■■■■ 4.28
LIMK2-206ENST00000462625 SUPT5HO00267 1087 aaKnown RBP41.73■■■■■ 4.27
LIMK2-206ENST00000462625 WDR62O43379 1518 aa41.66■■■■■ 4.26
LIMK2-206ENST00000462625 URB2Q14146 1524 aaKnown RBP41.41■■■■■ 4.22
LIMK2-206ENST00000462625 ABCC8Q09428 1581 aa41.24■■■■■ 4.19
LIMK2-206ENST00000462625 TOPBP1Q92547 1522 aa41.17■■■■■ 4.18
LIMK2-206ENST00000462625 DNMBPQ6XZF7 1577 aa41.13■■■■■ 4.18
LIMK2-206ENST00000462625 DNAJC5Q9H3Z4 198 aa41.06■■■■■ 4.16
LIMK2-206ENST00000462625 IFT140Q96RY7 1462 aa40.98■■■■■ 4.15
LIMK2-206ENST00000462625 POLA1P09884 1462 aaPredicted RBP40.79■■■■■ 4.12
LIMK2-206ENST00000462625 CUX1P39880 1505 aa40.77■■■■■ 4.12
LIMK2-206ENST00000462625 ZNF608Q9ULD9 1512 aaPredicted RBP40.74■■■■■ 4.11
LIMK2-206ENST00000462625 TARBP1Q13395 1621 aaKnown RBP40.74■■■■■ 4.11
LIMK2-206ENST00000462625 FGD5Q6ZNL6 1462 aa40.68■■■■■ 4.1
LIMK2-206ENST00000462625 SOGA1O94964 1423 aa40.67■■■■■ 4.1
LIMK2-206ENST00000462625 EIF4G3O43432 1585 aaKnown RBP40.63■■■■■ 4.09
LIMK2-206ENST00000462625 RAD54L2Q9Y4B4 1467 aa40.6■■■■■ 4.09
LIMK2-206ENST00000462625 AQRO60306 1485 aaKnown RBP eCLIP40.51■■■■■ 4.083e-9■■■■■ 58.4
LIMK2-206ENST00000462625 WRNQ14191 1432 aaPredicted RBP eCLIP40.48■■■■■ 4.07
LIMK2-206ENST00000462625 WDR97A6NE52 1622 aa40.47■■■■■ 4.07
LIMK2-206ENST00000462625 OSCARQ8IYS5 282 aa40.43■■■■■ 4.06
LIMK2-206ENST00000462625 BIVM-ERCC5R4GMW8 1640 aa40.42■■■■■ 4.06
LIMK2-206ENST00000462625 TDRD9Q8NDG6 1382 aaKnown RBP40.42■■■■■ 4.06
LIMK2-206ENST00000462625 TOP2BQ02880 1626 aa40.42■■■■■ 4.06
LIMK2-206ENST00000462625 SYNJ1O43426 1573 aa40.35■■■■■ 4.05
LIMK2-206ENST00000462625 ABCA10Q8WWZ4 1543 aa40.28■■■■■ 4.04
LIMK2-206ENST00000462625 GRIN2BQ13224 1484 aa40.21■■■■■ 4.03
LIMK2-206ENST00000462625 CHD1O14646 1710 aa40.2■■■■■ 4.03
LIMK2-206ENST00000462625 GAPVD1Q14C86 1478 aa40.19■■■■■ 4.02
LIMK2-206ENST00000462625 PBRM1Q86U86 1689 aa40.16■■■■■ 4.02
LIMK2-206ENST00000462625 FBLN2P98095 1184 aa40.15■■■■■ 4.02
LIMK2-206ENST00000462625 SNAPC4Q5SXM2 1469 aa40.14■■■■■ 4.02
LIMK2-206ENST00000462625 ABCA5Q8WWZ7 1642 aa40.13■■■■■ 4.02
LIMK2-206ENST00000462625 MAGI1Q96QZ7 1491 aaPredicted RBP40.13■■■■■ 4.01
LIMK2-206ENST00000462625 CHMP7Q8WUX9 453 aaPredicted RBP40.01■■■■■ 4
LIMK2-206ENST00000462625 SYNJ2O15056 1496 aa39.96■■■■□ 3.99
LIMK2-206ENST00000462625 ERICH3Q5RHP9 1530 aa39.83■■■■□ 3.97
LIMK2-206ENST00000462625 RIMBP3CA6NJZ7 1639 aa39.76■■■■□ 3.96
LIMK2-206ENST00000462625 RIMBP3BA6NNM3 1639 aa39.76■■■■□ 3.96
LIMK2-206ENST00000462625 RIMBP3Q9UFD9 1639 aa39.76■■■■□ 3.96
LIMK2-206ENST00000462625 ADAMTS12P58397 1594 aa39.76■■■■□ 3.96
LIMK2-206ENST00000462625 FHAD1B1AJZ9 1412 aa39.72■■■■□ 3.95
LIMK2-206ENST00000462625 ARHGEF11O15085 1522 aa39.71■■■■□ 3.95
LIMK2-206ENST00000462625 CLASP1Q7Z460 1538 aa39.69■■■■□ 3.94
LIMK2-206ENST00000462625 TRIM41Q8WV44 630 aa39.68■■■■□ 3.94
LIMK2-206ENST00000462625 KIF27Q86VH2 1401 aa39.67■■■■□ 3.94
LIMK2-206ENST00000462625 GRIN2AQ12879 1464 aa39.67■■■■□ 3.94
LIMK2-206ENST00000462625 IGF1RP08069 1367 aa39.48■■■■□ 3.91
LIMK2-206ENST00000462625 NUP160Q12769 1436 aa39.48■■■■□ 3.91
LIMK2-206ENST00000462625 CUL7Q14999 1698 aa39.48■■■■□ 3.91
LIMK2-206ENST00000462625 CEP170Q5SW79 1584 aa39.46■■■■□ 3.91
LIMK2-206ENST00000462625 CYB5RLQ6IPT4 315 aa39.39■■■■□ 3.9
LIMK2-206ENST00000462625 ARAP1Q96P48 1450 aa39.35■■■■□ 3.89
LIMK2-206ENST00000462625 CARMIL1Q5VZK9 1371 aa39.28■■■■□ 3.88
LIMK2-206ENST00000462625 SHROOM2Q13796 1616 aa39.23■■■■□ 3.87
LIMK2-206ENST00000462625 RUSC2Q8N2Y8 1516 aa39.18■■■■□ 3.86
LIMK2-206ENST00000462625 JPH4Q96JJ6 628 aa39.13■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms