RNA–Protein interactions for RNA: ENST00000462617.1

PRRC2A-204, Transcript of proline rich coiled-coil 2A, humanhuman

TSL 5

Gene PRRC2A, Length 1,015 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-204ENST00000462617 NISCHQ9Y2I1 1504 aa39.73■■■■□ 3.95
PRRC2A-204ENST00000462617 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
PRRC2A-204ENST00000462617 ABCC9O60706 1549 aa35.19■■■■□ 3.22
PRRC2A-204ENST00000462617 RB1CC1Q8TDY2 1594 aa33.65■■■□□ 2.98
PRRC2A-204ENST00000462617 DCAF8L2P0C7V8 631 aa33.61■■■□□ 2.97
PRRC2A-204ENST00000462617 NACADO15069 1562 aa33.51■■■□□ 2.96
PRRC2A-204ENST00000462617 MYO15BQ96JP2 1530 aa33.17■■■□□ 2.9
PRRC2A-204ENST00000462617 ZCCHC6Q5VYS8 1495 aaKnown RBP32.95■■■□□ 2.87
PRRC2A-204ENST00000462617 PABPN1Q86U42 306 aaKnown RBP eCLIP32.9■■■□□ 2.863e-7■□□□□ 8.9
PRRC2A-204ENST00000462617 DCAF1Q9Y4B6 1507 aa32.84■■■□□ 2.85
PRRC2A-204ENST00000462617 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
PRRC2A-204ENST00000462617 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
PRRC2A-204ENST00000462617 BICRAQ9NZM4 1560 aa32.55■■■□□ 2.8
PRRC2A-204ENST00000462617 SCRIBQ14160 1630 aa32.3■■■□□ 2.76
PRRC2A-204ENST00000462617 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
PRRC2A-204ENST00000462617 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
PRRC2A-204ENST00000462617 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
PRRC2A-204ENST00000462617 CECR2Q9BXF3 1484 aa31.69■■■□□ 2.66
PRRC2A-204ENST00000462617 NCAPD3P42695 1498 aa30.96■■■□□ 2.55
PRRC2A-204ENST00000462617 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.53
PRRC2A-204ENST00000462617 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
PRRC2A-204ENST00000462617 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
PRRC2A-204ENST00000462617 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
PRRC2A-204ENST00000462617 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
PRRC2A-204ENST00000462617 BAZ1BQ9UIG0 1483 aaKnown RBP30.62■■■□□ 2.49
PRRC2A-204ENST00000462617 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
PRRC2A-204ENST00000462617 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
PRRC2A-204ENST00000462617 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
PRRC2A-204ENST00000462617 NESP48681 1621 aa30.28■■■□□ 2.44
PRRC2A-204ENST00000462617 CUX2O14529 1486 aa30.21■■■□□ 2.43
PRRC2A-204ENST00000462617 WIZO95785 1651 aa30.2■■■□□ 2.43
PRRC2A-204ENST00000462617 LAMC3Q9Y6N6 1575 aa30.16■■■□□ 2.42
PRRC2A-204ENST00000462617 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
PRRC2A-204ENST00000462617 PDS5BQ9NTI5 1447 aa30.08■■■□□ 2.41
PRRC2A-204ENST00000462617 CADPSQ9ULU8 1353 aa30.07■■■□□ 2.4
PRRC2A-204ENST00000462617 DNAJC5Q9H3Z4 198 aa29.91■■■□□ 2.38
PRRC2A-204ENST00000462617 TOP2AP11388 1531 aaKnown RBP29.87■■■□□ 2.37
PRRC2A-204ENST00000462617 KIF21AQ7Z4S6 1674 aa29.83■■■□□ 2.37
PRRC2A-204ENST00000462617 THOC2Q8NI27 1593 aaKnown RBP29.83■■■□□ 2.37
PRRC2A-204ENST00000462617 CFTRP13569 1480 aa29.74■■■□□ 2.35
PRRC2A-204ENST00000462617 MRC2Q9UBG0 1479 aa29.71■■■□□ 2.35
PRRC2A-204ENST00000462617 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
PRRC2A-204ENST00000462617 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
PRRC2A-204ENST00000462617 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
PRRC2A-204ENST00000462617 WDR62O43379 1518 aa29.57■■■□□ 2.32
PRRC2A-204ENST00000462617 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
PRRC2A-204ENST00000462617 PRDM2Q13029 1718 aa29.33■■■□□ 2.29
PRRC2A-204ENST00000462617 ABCC8Q09428 1581 aa29.2■■■□□ 2.26
PRRC2A-204ENST00000462617 SUPT5HO00267 1087 aaKnown RBP29.19■■■□□ 2.26
PRRC2A-204ENST00000462617 TOPBP1Q92547 1522 aa29.13■■■□□ 2.25
PRRC2A-204ENST00000462617 IFT140Q96RY7 1462 aa29.09■■■□□ 2.25
PRRC2A-204ENST00000462617 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
PRRC2A-204ENST00000462617 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
PRRC2A-204ENST00000462617 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
PRRC2A-204ENST00000462617 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
PRRC2A-204ENST00000462617 SOGA1O94964 1423 aa28.83■■■□□ 2.21
PRRC2A-204ENST00000462617 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.22e-7■■■■■ 28.8
PRRC2A-204ENST00000462617 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
PRRC2A-204ENST00000462617 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
PRRC2A-204ENST00000462617 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
PRRC2A-204ENST00000462617 EIF4G3O43432 1585 aaKnown RBP28.74■■■□□ 2.19
PRRC2A-204ENST00000462617 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
PRRC2A-204ENST00000462617 CUX1P39880 1505 aa28.71■■■□□ 2.19
PRRC2A-204ENST00000462617 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.18
PRRC2A-204ENST00000462617 FBLN2P98095 1184 aa28.67■■■□□ 2.18
PRRC2A-204ENST00000462617 WDR97A6NE52 1622 aa28.57■■■□□ 2.16
PRRC2A-204ENST00000462617 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
PRRC2A-204ENST00000462617 GRIN2BQ13224 1484 aa28.49■■■□□ 2.15
PRRC2A-204ENST00000462617 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
PRRC2A-204ENST00000462617 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
PRRC2A-204ENST00000462617 CHD1O14646 1710 aa28.44■■■□□ 2.14
PRRC2A-204ENST00000462617 MAGI1Q96QZ7 1491 aaPredicted RBP28.44■■■□□ 2.14
PRRC2A-204ENST00000462617 GAPVD1Q14C86 1478 aa28.43■■■□□ 2.14
PRRC2A-204ENST00000462617 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
PRRC2A-204ENST00000462617 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
PRRC2A-204ENST00000462617 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
PRRC2A-204ENST00000462617 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
PRRC2A-204ENST00000462617 ARHGEF11O15085 1522 aa28.38■■■□□ 2.13
PRRC2A-204ENST00000462617 TOP2BQ02880 1626 aa28.35■■■□□ 2.13
PRRC2A-204ENST00000462617 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
PRRC2A-204ENST00000462617 CYB5RLQ6IPT4 315 aa28.32■■■□□ 2.12
PRRC2A-204ENST00000462617 BIVM-ERCC5R4GMW8 1640 aa28.31■■■□□ 2.12
PRRC2A-204ENST00000462617 SYNJ1O43426 1573 aa28.28■■■□□ 2.12
PRRC2A-204ENST00000462617 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
PRRC2A-204ENST00000462617 PBRM1Q86U86 1689 aa28.25■■■□□ 2.11
PRRC2A-204ENST00000462617 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
PRRC2A-204ENST00000462617 FHAD1B1AJZ9 1412 aa28.1■■■□□ 2.09
PRRC2A-204ENST00000462617 ARAP1Q96P48 1450 aa28.1■■■□□ 2.09
PRRC2A-204ENST00000462617 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
PRRC2A-204ENST00000462617 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
PRRC2A-204ENST00000462617 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
PRRC2A-204ENST00000462617 NUP160Q12769 1436 aa27.97■■■□□ 2.07
PRRC2A-204ENST00000462617 TRHP20396 242 aaPredicted RBP27.93■■■□□ 2.06
PRRC2A-204ENST00000462617 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
PRRC2A-204ENST00000462617 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
PRRC2A-204ENST00000462617 IGF1RP08069 1367 aa27.87■■■□□ 2.05
PRRC2A-204ENST00000462617 JPH4Q96JJ6 628 aa27.84■■■□□ 2.05
PRRC2A-204ENST00000462617 PRG4Q92954 1404 aaPredicted RBP27.74■■■□□ 2.03
PRRC2A-204ENST00000462617 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
PRRC2A-204ENST00000462617 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms