RNA–Protein interactions for RNA: ENST00000462423.1

DENND4B-203, Transcript of DENN domain containing 4B, humanhuman

TSL 4

Gene DENND4B, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-203ENST00000462423 NISCHQ9Y2I1 1504 aa44.82■■■■■ 4.77
DENND4B-203ENST00000462423 CCDC180Q9P1Z9 1646 aa40.02■■■■■ 4
DENND4B-203ENST00000462423 ABCC9O60706 1549 aa39.55■■■■□ 3.92
DENND4B-203ENST00000462423 RB1CC1Q8TDY2 1594 aa37.84■■■■□ 3.65
DENND4B-203ENST00000462423 DCAF8L2P0C7V8 631 aa37.71■■■■□ 3.63
DENND4B-203ENST00000462423 NACADO15069 1562 aa37.66■■■■□ 3.62
DENND4B-203ENST00000462423 ZCCHC6Q5VYS8 1495 aaKnown RBP37.26■■■■□ 3.56
DENND4B-203ENST00000462423 MYO15BQ96JP2 1530 aa37.24■■■■□ 3.55
DENND4B-203ENST00000462423 UNC13AQ9UPW8 1703 aa37.06■■■■□ 3.52
DENND4B-203ENST00000462423 DCAF1Q9Y4B6 1507 aa36.99■■■■□ 3.51
DENND4B-203ENST00000462423 PABPN1Q86U42 306 aaKnown RBP eCLIP36.9■■■■□ 3.5
DENND4B-203ENST00000462423 BICRAQ9NZM4 1560 aa36.7■■■■□ 3.47
DENND4B-203ENST00000462423 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
DENND4B-203ENST00000462423 DNAJC5BQ9UF47 199 aa36.56■■■■□ 3.44
DENND4B-203ENST00000462423 SHROOM4Q9ULL8 1493 aa36.18■■■■□ 3.38
DENND4B-203ENST00000462423 EIF4G1Q04637 1599 aaKnown RBP35.77■■■■□ 3.32
DENND4B-203ENST00000462423 CC2D2AQ9P2K1 1620 aa35.74■■■■□ 3.31
DENND4B-203ENST00000462423 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
DENND4B-203ENST00000462423 SMARCA4P51532 1647 aa34.9■■■■□ 3.18
DENND4B-203ENST00000462423 BAZ1AQ9NRL2 1556 aaPredicted RBP34.77■■■■□ 3.16
DENND4B-203ENST00000462423 ATAD2BQ9ULI0 1458 aa34.74■■■■□ 3.15
DENND4B-203ENST00000462423 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
DENND4B-203ENST00000462423 SMARCA2P51531 1590 aa34.69■■■■□ 3.14
DENND4B-203ENST00000462423 MROH2BQ7Z745 1585 aa34.58■■■■□ 3.13
DENND4B-203ENST00000462423 HMGXB3Q12766 1538 aa34.56■■■■□ 3.12
DENND4B-203ENST00000462423 BAZ1BQ9UIG0 1483 aaKnown RBP34.49■■■■□ 3.11
DENND4B-203ENST00000462423 PEG3Q9GZU2 1588 aa34.47■■■■□ 3.11
DENND4B-203ENST00000462423 WIZO95785 1651 aa34.24■■■■□ 3.07
DENND4B-203ENST00000462423 NESP48681 1621 aa34.13■■■■□ 3.05
DENND4B-203ENST00000462423 ERCC6Q03468 1493 aa34.12■■■■□ 3.05
DENND4B-203ENST00000462423 RSF1Q96T23 1441 aaPredicted RBP34.02■■■■□ 3.04
DENND4B-203ENST00000462423 LAMC3Q9Y6N6 1575 aa33.92■■■■□ 3.02
DENND4B-203ENST00000462423 TOP2AP11388 1531 aaKnown RBP33.8■■■■□ 3
DENND4B-203ENST00000462423 CUX2O14529 1486 aa33.78■■■■□ 3
DENND4B-203ENST00000462423 KIF21AQ7Z4S6 1674 aa33.75■■■□□ 2.99
DENND4B-203ENST00000462423 CADPSQ9ULU8 1353 aa33.72■■■□□ 2.99
DENND4B-203ENST00000462423 PDS5BQ9NTI5 1447 aa33.69■■■□□ 2.98
DENND4B-203ENST00000462423 THOC2Q8NI27 1593 aaKnown RBP33.66■■■□□ 2.98
DENND4B-203ENST00000462423 CFTRP13569 1480 aa33.44■■■□□ 2.94
DENND4B-203ENST00000462423 CCDC88BA6NC98 1476 aa33.4■■■□□ 2.94
DENND4B-203ENST00000462423 MRC2Q9UBG0 1479 aa33.4■■■□□ 2.94
DENND4B-203ENST00000462423 FANCD2Q9BXW9 1451 aa33.39■■■□□ 2.94
DENND4B-203ENST00000462423 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
DENND4B-203ENST00000462423 WDR62O43379 1518 aa33.28■■■□□ 2.92
DENND4B-203ENST00000462423 PRDM2Q13029 1718 aa33.28■■■□□ 2.92
DENND4B-203ENST00000462423 DNAJC5Q9H3Z4 198 aa33.13■■■□□ 2.89
DENND4B-203ENST00000462423 URB2Q14146 1524 aaKnown RBP33.09■■■□□ 2.89
DENND4B-203ENST00000462423 SUPT5HO00267 1087 aaKnown RBP33.03■■■□□ 2.88
DENND4B-203ENST00000462423 TOPBP1Q92547 1522 aa32.82■■■□□ 2.85
DENND4B-203ENST00000462423 DNMBPQ6XZF7 1577 aa32.76■■■□□ 2.84
DENND4B-203ENST00000462423 ABCC8Q09428 1581 aa32.72■■■□□ 2.83
DENND4B-203ENST00000462423 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
DENND4B-203ENST00000462423 ZNF608Q9ULD9 1512 aaPredicted RBP32.61■■■□□ 2.81
DENND4B-203ENST00000462423 POLA1P09884 1462 aaPredicted RBP32.52■■■□□ 2.8
DENND4B-203ENST00000462423 TARBP1Q13395 1621 aaKnown RBP32.49■■■□□ 2.79
DENND4B-203ENST00000462423 EIF4G3O43432 1585 aaKnown RBP32.49■■■□□ 2.79
DENND4B-203ENST00000462423 CUX1P39880 1505 aa32.46■■■□□ 2.79
DENND4B-203ENST00000462423 RAD54L2Q9Y4B4 1467 aa32.42■■■□□ 2.78
DENND4B-203ENST00000462423 FGD5Q6ZNL6 1462 aa32.42■■■□□ 2.78
DENND4B-203ENST00000462423 AQRO60306 1485 aaKnown RBP eCLIP32.37■■■□□ 2.772e-10■■■■■ 73.2
DENND4B-203ENST00000462423 SOGA1O94964 1423 aa32.37■■■□□ 2.77
DENND4B-203ENST00000462423 OSCARQ8IYS5 282 aa32.32■■■□□ 2.76
DENND4B-203ENST00000462423 TDRD9Q8NDG6 1382 aaKnown RBP32.27■■■□□ 2.76
DENND4B-203ENST00000462423 CHD1O14646 1710 aa32.18■■■□□ 2.74
DENND4B-203ENST00000462423 WDR97A6NE52 1622 aa32.17■■■□□ 2.74
DENND4B-203ENST00000462423 WRNQ14191 1432 aaPredicted RBP eCLIP32.11■■■□□ 2.73
DENND4B-203ENST00000462423 FBLN2P98095 1184 aa32.11■■■□□ 2.73
DENND4B-203ENST00000462423 SYNJ1O43426 1573 aa32.11■■■□□ 2.73
DENND4B-203ENST00000462423 BIVM-ERCC5R4GMW8 1640 aa32.09■■■□□ 2.73
DENND4B-203ENST00000462423 SNAPC4Q5SXM2 1469 aa32.08■■■□□ 2.73
DENND4B-203ENST00000462423 TOP2BQ02880 1626 aa32.08■■■□□ 2.73
DENND4B-203ENST00000462423 TRIM41Q8WV44 630 aa32.05■■■□□ 2.72
DENND4B-203ENST00000462423 PBRM1Q86U86 1689 aa32.03■■■□□ 2.72
DENND4B-203ENST00000462423 ABCA10Q8WWZ4 1543 aa32.03■■■□□ 2.72
DENND4B-203ENST00000462423 GRIN2BQ13224 1484 aa32.03■■■□□ 2.72
DENND4B-203ENST00000462423 GAPVD1Q14C86 1478 aa32■■■□□ 2.71
DENND4B-203ENST00000462423 ABCA5Q8WWZ7 1642 aa31.97■■■□□ 2.71
DENND4B-203ENST00000462423 MAGI1Q96QZ7 1491 aaPredicted RBP31.97■■■□□ 2.71
DENND4B-203ENST00000462423 RIMBP3CA6NJZ7 1639 aa31.93■■■□□ 2.7
DENND4B-203ENST00000462423 RIMBP3BA6NNM3 1639 aa31.93■■■□□ 2.7
DENND4B-203ENST00000462423 RIMBP3Q9UFD9 1639 aa31.93■■■□□ 2.7
DENND4B-203ENST00000462423 CHMP7Q8WUX9 453 aaPredicted RBP31.9■■■□□ 2.7
DENND4B-203ENST00000462423 ARHGEF11O15085 1522 aa31.86■■■□□ 2.69
DENND4B-203ENST00000462423 SYNJ2O15056 1496 aa31.85■■■□□ 2.69
DENND4B-203ENST00000462423 CLASP1Q7Z460 1538 aa31.74■■■□□ 2.67
DENND4B-203ENST00000462423 ADAMTS12P58397 1594 aa31.72■■■□□ 2.67
DENND4B-203ENST00000462423 ERICH3Q5RHP9 1530 aa31.64■■■□□ 2.66
DENND4B-203ENST00000462423 GRIN2AQ12879 1464 aa31.63■■■□□ 2.65
DENND4B-203ENST00000462423 FHAD1B1AJZ9 1412 aa31.59■■■□□ 2.65
DENND4B-203ENST00000462423 CYB5RLQ6IPT4 315 aa31.59■■■□□ 2.65
DENND4B-203ENST00000462423 ARAP1Q96P48 1450 aa31.59■■■□□ 2.65
DENND4B-203ENST00000462423 CEP170Q5SW79 1584 aa31.52■■■□□ 2.64
DENND4B-203ENST00000462423 NUP160Q12769 1436 aa31.46■■■□□ 2.63
DENND4B-203ENST00000462423 KIF27Q86VH2 1401 aa31.45■■■□□ 2.63
DENND4B-203ENST00000462423 IGF1RP08069 1367 aa31.34■■■□□ 2.61
DENND4B-203ENST00000462423 ERCC6L2Q5T890 1561 aa31.34■■■□□ 2.61
DENND4B-203ENST00000462423 CUL7Q14999 1698 aa31.33■■■□□ 2.61
DENND4B-203ENST00000462423 SHROOM2Q13796 1616 aa31.3■■■□□ 2.6
DENND4B-203ENST00000462423 RUSC2Q8N2Y8 1516 aa31.25■■■□□ 2.59
DENND4B-203ENST00000462423 CARMIL1Q5VZK9 1371 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms