RNA–Protein interactions for RNA: ENST00000462259.5

TARBP1-202, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

TSL 1 (best)

Gene TARBP1, Length 1,650 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-202ENST00000462259 NISCHQ9Y2I1 1504 aa26.33■■□□□ 1.81
TARBP1-202ENST00000462259 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
TARBP1-202ENST00000462259 ABCC9O60706 1549 aa22.93■■□□□ 1.26
TARBP1-202ENST00000462259 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
TARBP1-202ENST00000462259 NACADO15069 1562 aa21.98■■□□□ 1.11
TARBP1-202ENST00000462259 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
TARBP1-202ENST00000462259 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
TARBP1-202ENST00000462259 MYO15BQ96JP2 1530 aa21.84■■□□□ 1.09
TARBP1-202ENST00000462259 DCAF1Q9Y4B6 1507 aa21.76■■□□□ 1.07
TARBP1-202ENST00000462259 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
TARBP1-202ENST00000462259 BICRAQ9NZM4 1560 aa21.43■■□□□ 1.02
TARBP1-202ENST00000462259 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.026e-9■□□□□ 10.6
TARBP1-202ENST00000462259 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
TARBP1-202ENST00000462259 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
TARBP1-202ENST00000462259 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
TARBP1-202ENST00000462259 EIF4G1Q04637 1599 aaKnown RBP20.83■□□□□ 0.92
TARBP1-202ENST00000462259 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
TARBP1-202ENST00000462259 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
TARBP1-202ENST00000462259 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
TARBP1-202ENST00000462259 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
TARBP1-202ENST00000462259 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
TARBP1-202ENST00000462259 ATAD2BQ9ULI0 1458 aa20.32■□□□□ 0.84
TARBP1-202ENST00000462259 NCAPD3P42695 1498 aa20.29■□□□□ 0.84
TARBP1-202ENST00000462259 SMARCA2P51531 1590 aa20.27■□□□□ 0.83
TARBP1-202ENST00000462259 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
TARBP1-202ENST00000462259 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
TARBP1-202ENST00000462259 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
TARBP1-202ENST00000462259 WIZO95785 1651 aa20.12■□□□□ 0.81
TARBP1-202ENST00000462259 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
TARBP1-202ENST00000462259 NESP48681 1621 aa19.87■□□□□ 0.77
TARBP1-202ENST00000462259 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
TARBP1-202ENST00000462259 LAMC3Q9Y6N6 1575 aa19.76■□□□□ 0.75
TARBP1-202ENST00000462259 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
TARBP1-202ENST00000462259 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
TARBP1-202ENST00000462259 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
TARBP1-202ENST00000462259 CCDC88BA6NC98 1476 aa19.63■□□□□ 0.73
TARBP1-202ENST00000462259 CFTRP13569 1480 aa19.59■□□□□ 0.73
TARBP1-202ENST00000462259 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.73
TARBP1-202ENST00000462259 THOC2Q8NI27 1593 aaKnown RBP19.58■□□□□ 0.72
TARBP1-202ENST00000462259 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
TARBP1-202ENST00000462259 CUX2O14529 1486 aa19.5■□□□□ 0.71
TARBP1-202ENST00000462259 PRDM2Q13029 1718 aa19.49■□□□□ 0.71
TARBP1-202ENST00000462259 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
TARBP1-202ENST00000462259 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
TARBP1-202ENST00000462259 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
TARBP1-202ENST00000462259 WDR62O43379 1518 aa19.39■□□□□ 0.69
TARBP1-202ENST00000462259 URB2Q14146 1524 aaKnown RBP19.33■□□□□ 0.68
TARBP1-202ENST00000462259 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
TARBP1-202ENST00000462259 DNMBPQ6XZF7 1577 aa19.16■□□□□ 0.66
TARBP1-202ENST00000462259 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
TARBP1-202ENST00000462259 CUX1P39880 1505 aa19.07■□□□□ 0.64
TARBP1-202ENST00000462259 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
TARBP1-202ENST00000462259 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
TARBP1-202ENST00000462259 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.63
TARBP1-202ENST00000462259 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
TARBP1-202ENST00000462259 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
TARBP1-202ENST00000462259 RAD54L2Q9Y4B4 1467 aa18.96■□□□□ 0.63
TARBP1-202ENST00000462259 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
TARBP1-202ENST00000462259 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
TARBP1-202ENST00000462259 DNAJC5Q9H3Z4 198 aa18.92■□□□□ 0.62
TARBP1-202ENST00000462259 SOGA1O94964 1423 aa18.91■□□□□ 0.62
TARBP1-202ENST00000462259 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
TARBP1-202ENST00000462259 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
TARBP1-202ENST00000462259 TOP2BQ02880 1626 aa18.88■□□□□ 0.61
TARBP1-202ENST00000462259 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.615e-14■■■□□ 15.1
TARBP1-202ENST00000462259 WDR97A6NE52 1622 aa18.87■□□□□ 0.61
TARBP1-202ENST00000462259 TDRD9Q8NDG6 1382 aaKnown RBP18.82■□□□□ 0.6
TARBP1-202ENST00000462259 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
TARBP1-202ENST00000462259 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
TARBP1-202ENST00000462259 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
TARBP1-202ENST00000462259 CHD1O14646 1710 aa18.72■□□□□ 0.59
TARBP1-202ENST00000462259 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
TARBP1-202ENST00000462259 SNAPC4Q5SXM2 1469 aa18.7■□□□□ 0.58
TARBP1-202ENST00000462259 GRIN2BQ13224 1484 aa18.69■□□□□ 0.58
TARBP1-202ENST00000462259 OSCARQ8IYS5 282 aa18.66■□□□□ 0.58
TARBP1-202ENST00000462259 MAGI1Q96QZ7 1491 aaPredicted RBP18.64■□□□□ 0.57
TARBP1-202ENST00000462259 FBLN2P98095 1184 aa18.59■□□□□ 0.57
TARBP1-202ENST00000462259 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
TARBP1-202ENST00000462259 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
TARBP1-202ENST00000462259 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
TARBP1-202ENST00000462259 CHMP7Q8WUX9 453 aaPredicted RBP18.53■□□□□ 0.56
TARBP1-202ENST00000462259 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
TARBP1-202ENST00000462259 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
TARBP1-202ENST00000462259 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
TARBP1-202ENST00000462259 KIF27Q86VH2 1401 aa18.46■□□□□ 0.55
TARBP1-202ENST00000462259 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
TARBP1-202ENST00000462259 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
TARBP1-202ENST00000462259 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
TARBP1-202ENST00000462259 ARHGEF11O15085 1522 aa18.44■□□□□ 0.54
TARBP1-202ENST00000462259 IGF1RP08069 1367 aa18.43■□□□□ 0.54
TARBP1-202ENST00000462259 CEP170Q5SW79 1584 aa18.42■□□□□ 0.54
TARBP1-202ENST00000462259 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
TARBP1-202ENST00000462259 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
TARBP1-202ENST00000462259 NUP160Q12769 1436 aa18.39■□□□□ 0.53
TARBP1-202ENST00000462259 CUL7Q14999 1698 aa18.38■□□□□ 0.53
TARBP1-202ENST00000462259 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
TARBP1-202ENST00000462259 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
TARBP1-202ENST00000462259 SHROOM2Q13796 1616 aa18.29■□□□□ 0.52
TARBP1-202ENST00000462259 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
TARBP1-202ENST00000462259 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms