RNA–Protein interactions for RNA: ENST00000462171.1

TMCO4-203, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 3

Gene TMCO4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-203ENST00000462171 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
TMCO4-203ENST00000462171 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
TMCO4-203ENST00000462171 ABCC9O60706 1549 aa18.89■□□□□ 0.61
TMCO4-203ENST00000462171 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
TMCO4-203ENST00000462171 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
TMCO4-203ENST00000462171 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
TMCO4-203ENST00000462171 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
TMCO4-203ENST00000462171 NACADO15069 1562 aa18.04■□□□□ 0.48
TMCO4-203ENST00000462171 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
TMCO4-203ENST00000462171 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
TMCO4-203ENST00000462171 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
TMCO4-203ENST00000462171 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
TMCO4-203ENST00000462171 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
TMCO4-203ENST00000462171 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
TMCO4-203ENST00000462171 DNAJC5BQ9UF47 199 aa17.39■□□□□ 0.37
TMCO4-203ENST00000462171 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
TMCO4-203ENST00000462171 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
TMCO4-203ENST00000462171 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
TMCO4-203ENST00000462171 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
TMCO4-203ENST00000462171 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
TMCO4-203ENST00000462171 CECR2Q9BXF3 1484 aa16.95■□□□□ 0.3
TMCO4-203ENST00000462171 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
TMCO4-203ENST00000462171 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
TMCO4-203ENST00000462171 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
TMCO4-203ENST00000462171 WIZO95785 1651 aa16.72■□□□□ 0.27
TMCO4-203ENST00000462171 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
TMCO4-203ENST00000462171 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
TMCO4-203ENST00000462171 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
TMCO4-203ENST00000462171 PEG3Q9GZU2 1588 aa16.65■□□□□ 0.26
TMCO4-203ENST00000462171 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
TMCO4-203ENST00000462171 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
TMCO4-203ENST00000462171 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
TMCO4-203ENST00000462171 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.23
TMCO4-203ENST00000462171 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
TMCO4-203ENST00000462171 NESP48681 1621 aa16.33■□□□□ 0.2
TMCO4-203ENST00000462171 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
TMCO4-203ENST00000462171 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
TMCO4-203ENST00000462171 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
TMCO4-203ENST00000462171 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
TMCO4-203ENST00000462171 CFTRP13569 1480 aa16.12■□□□□ 0.17
TMCO4-203ENST00000462171 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
TMCO4-203ENST00000462171 EEA1Q15075 1411 aa16.09■□□□□ 0.17
TMCO4-203ENST00000462171 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
TMCO4-203ENST00000462171 CUX2O14529 1486 aa16.03■□□□□ 0.16
TMCO4-203ENST00000462171 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
TMCO4-203ENST00000462171 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
TMCO4-203ENST00000462171 KIF21AQ7Z4S6 1674 aa16.01■□□□□ 0.15
TMCO4-203ENST00000462171 PRDM2Q13029 1718 aa16■□□□□ 0.15
TMCO4-203ENST00000462171 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
TMCO4-203ENST00000462171 FAM9AQ8IZU1 332 aaPredicted RBP15.97■□□□□ 0.15
TMCO4-203ENST00000462171 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
TMCO4-203ENST00000462171 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
TMCO4-203ENST00000462171 TOP2BQ02880 1626 aa15.92■□□□□ 0.14
TMCO4-203ENST00000462171 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
TMCO4-203ENST00000462171 WDR62O43379 1518 aa15.89■□□□□ 0.13
TMCO4-203ENST00000462171 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
TMCO4-203ENST00000462171 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
TMCO4-203ENST00000462171 URB2Q14146 1524 aaKnown RBP15.87■□□□□ 0.13
TMCO4-203ENST00000462171 SOGA1O94964 1423 aa15.8■□□□□ 0.12
TMCO4-203ENST00000462171 CUX1P39880 1505 aa15.78■□□□□ 0.12
TMCO4-203ENST00000462171 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
TMCO4-203ENST00000462171 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
TMCO4-203ENST00000462171 GOLGA3Q08378 1498 aa15.75■□□□□ 0.11
TMCO4-203ENST00000462171 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
TMCO4-203ENST00000462171 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
TMCO4-203ENST00000462171 DNMBPQ6XZF7 1577 aa15.72■□□□□ 0.11
TMCO4-203ENST00000462171 KIF21BO75037 1637 aa15.69■□□□□ 0.1
TMCO4-203ENST00000462171 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
TMCO4-203ENST00000462171 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
TMCO4-203ENST00000462171 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
TMCO4-203ENST00000462171 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
TMCO4-203ENST00000462171 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
TMCO4-203ENST00000462171 DNAJC5Q9H3Z4 198 aa15.64■□□□□ 0.09
TMCO4-203ENST00000462171 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
TMCO4-203ENST00000462171 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
TMCO4-203ENST00000462171 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
TMCO4-203ENST00000462171 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
TMCO4-203ENST00000462171 AQRO60306 1485 aaKnown RBP eCLIP15.58■□□□□ 0.08
TMCO4-203ENST00000462171 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
TMCO4-203ENST00000462171 CEP162Q5TB80 1403 aa15.56■□□□□ 0.08
TMCO4-203ENST00000462171 PRXQ9BXM0 1461 aa15.56■□□□□ 0.08
TMCO4-203ENST00000462171 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
TMCO4-203ENST00000462171 IGF1RP08069 1367 aa15.52■□□□□ 0.08
TMCO4-203ENST00000462171 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
TMCO4-203ENST00000462171 TRIM26Q12899 539 aaPredicted RBP15.51■□□□□ 0.07
TMCO4-203ENST00000462171 RAPGEF2Q9Y4G8 1499 aa15.5■□□□□ 0.07
TMCO4-203ENST00000462171 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
TMCO4-203ENST00000462171 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
TMCO4-203ENST00000462171 APLP2Q06481 763 aa15.48■□□□□ 0.07
TMCO4-203ENST00000462171 CLIP1P30622 1438 aa15.47■□□□□ 0.07
TMCO4-203ENST00000462171 FBLN2P98095 1184 aa15.47■□□□□ 0.07
TMCO4-203ENST00000462171 CUL7Q14999 1698 aa15.45■□□□□ 0.06
TMCO4-203ENST00000462171 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
TMCO4-203ENST00000462171 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
TMCO4-203ENST00000462171 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
TMCO4-203ENST00000462171 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
TMCO4-203ENST00000462171 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
TMCO4-203ENST00000462171 PCGF6Q9BYE7 350 aa15.39■□□□□ 0.05
TMCO4-203ENST00000462171 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
TMCO4-203ENST00000462171 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms