RNA–Protein interactions for RNA: ENST00000462099.1

MFSD9-207, Transcript of major facilitator superfamily domain containing 9, humanhuman

TSL 3

Gene MFSD9, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD9-207ENST00000462099 NISCHQ9Y2I1 1504 aa51.53■■■■■ 5.84
MFSD9-207ENST00000462099 CCDC180Q9P1Z9 1646 aa45.87■■■■■ 4.93
MFSD9-207ENST00000462099 ABCC9O60706 1549 aa44.95■■■■■ 4.79
MFSD9-207ENST00000462099 RB1CC1Q8TDY2 1594 aa43.22■■■■■ 4.51
MFSD9-207ENST00000462099 DCAF8L2P0C7V8 631 aa43.16■■■■■ 4.5
MFSD9-207ENST00000462099 NACADO15069 1562 aa43.15■■■■■ 4.5
MFSD9-207ENST00000462099 ZCCHC6Q5VYS8 1495 aaKnown RBP42.87■■■■■ 4.45
MFSD9-207ENST00000462099 MYO15BQ96JP2 1530 aa42.84■■■■■ 4.45
MFSD9-207ENST00000462099 DCAF1Q9Y4B6 1507 aa42.62■■■■■ 4.41
MFSD9-207ENST00000462099 UNC13AQ9UPW8 1703 aa42.29■■■■■ 4.36
MFSD9-207ENST00000462099 PABPN1Q86U42 306 aaKnown RBP eCLIP42.01■■■■■ 4.32
MFSD9-207ENST00000462099 BICRAQ9NZM4 1560 aa41.9■■■■■ 4.3
MFSD9-207ENST00000462099 SCRIBQ14160 1630 aa41.81■■■■■ 4.28
MFSD9-207ENST00000462099 SHROOM4Q9ULL8 1493 aa41.42■■■■■ 4.22
MFSD9-207ENST00000462099 DNAJC5BQ9UF47 199 aa41.37■■■■■ 4.21
MFSD9-207ENST00000462099 EIF4G1Q04637 1599 aaKnown RBP40.79■■■■■ 4.12
MFSD9-207ENST00000462099 CC2D2AQ9P2K1 1620 aa40.67■■■■■ 4.1
MFSD9-207ENST00000462099 CECR2Q9BXF3 1484 aa40.39■■■■■ 4.06
MFSD9-207ENST00000462099 SMARCA4P51532 1647 aa40.01■■■■■ 4
MFSD9-207ENST00000462099 BAZ1AQ9NRL2 1556 aaPredicted RBP39.95■■■■□ 3.99
MFSD9-207ENST00000462099 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
MFSD9-207ENST00000462099 ATAD2BQ9ULI0 1458 aa39.81■■■■□ 3.96
MFSD9-207ENST00000462099 SMARCA2P51531 1590 aa39.76■■■■□ 3.95
MFSD9-207ENST00000462099 MROH2BQ7Z745 1585 aa39.71■■■■□ 3.95
MFSD9-207ENST00000462099 PEG3Q9GZU2 1588 aa39.61■■■■□ 3.93
MFSD9-207ENST00000462099 HMGXB3Q12766 1538 aa39.58■■■■□ 3.93
MFSD9-207ENST00000462099 BAZ1BQ9UIG0 1483 aaKnown RBP39.47■■■■□ 3.91
MFSD9-207ENST00000462099 WIZO95785 1651 aa39.31■■■■□ 3.88
MFSD9-207ENST00000462099 RSF1Q96T23 1441 aaPredicted RBP39.22■■■■□ 3.87
MFSD9-207ENST00000462099 NESP48681 1621 aa38.87■■■■□ 3.81
MFSD9-207ENST00000462099 TOP2AP11388 1531 aaKnown RBP38.84■■■■□ 3.81
MFSD9-207ENST00000462099 LAMC3Q9Y6N6 1575 aa38.78■■■■□ 3.8
MFSD9-207ENST00000462099 ERCC6Q03468 1493 aa38.75■■■■□ 3.79
MFSD9-207ENST00000462099 CADPSQ9ULU8 1353 aa38.65■■■■□ 3.78
MFSD9-207ENST00000462099 PDS5BQ9NTI5 1447 aa38.52■■■■□ 3.76
MFSD9-207ENST00000462099 KIF21AQ7Z4S6 1674 aa38.45■■■■□ 3.75
MFSD9-207ENST00000462099 CCDC88BA6NC98 1476 aa38.41■■■■□ 3.74
MFSD9-207ENST00000462099 CUX2O14529 1486 aa38.38■■■■□ 3.73
MFSD9-207ENST00000462099 CFTRP13569 1480 aa38.38■■■■□ 3.73
MFSD9-207ENST00000462099 THOC2Q8NI27 1593 aaKnown RBP38.29■■■■□ 3.72
MFSD9-207ENST00000462099 SUPT5HO00267 1087 aaKnown RBP38.2■■■■□ 3.71
MFSD9-207ENST00000462099 FANCD2Q9BXW9 1451 aa38.19■■■■□ 3.7
MFSD9-207ENST00000462099 PRDM2Q13029 1718 aa38.15■■■■□ 3.7
MFSD9-207ENST00000462099 CEP164Q9UPV0 1460 aa38.15■■■■□ 3.7
MFSD9-207ENST00000462099 MRC2Q9UBG0 1479 aa38.1■■■■□ 3.69
MFSD9-207ENST00000462099 WDR62O43379 1518 aa37.97■■■■□ 3.67
MFSD9-207ENST00000462099 URB2Q14146 1524 aaKnown RBP37.81■■■■□ 3.64
MFSD9-207ENST00000462099 ABCC8Q09428 1581 aa37.6■■■■□ 3.61
MFSD9-207ENST00000462099 TOPBP1Q92547 1522 aa37.57■■■■□ 3.61
MFSD9-207ENST00000462099 DNMBPQ6XZF7 1577 aa37.51■■■■□ 3.6
MFSD9-207ENST00000462099 DNAJC5Q9H3Z4 198 aa37.36■■■■□ 3.57
MFSD9-207ENST00000462099 IFT140Q96RY7 1462 aa37.35■■■■□ 3.57
MFSD9-207ENST00000462099 CUX1P39880 1505 aa37.25■■■■□ 3.55
MFSD9-207ENST00000462099 POLA1P09884 1462 aaPredicted RBP37.24■■■■□ 3.55
MFSD9-207ENST00000462099 ZNF608Q9ULD9 1512 aaPredicted RBP37.19■■■■□ 3.54
MFSD9-207ENST00000462099 TARBP1Q13395 1621 aaKnown RBP37.18■■■■□ 3.54
MFSD9-207ENST00000462099 FGD5Q6ZNL6 1462 aa37.13■■■■□ 3.54
MFSD9-207ENST00000462099 SOGA1O94964 1423 aa37.12■■■■□ 3.53
MFSD9-207ENST00000462099 RAD54L2Q9Y4B4 1467 aa37.08■■■■□ 3.53
MFSD9-207ENST00000462099 EIF4G3O43432 1585 aaKnown RBP37.04■■■■□ 3.52
MFSD9-207ENST00000462099 AQRO60306 1485 aaKnown RBP eCLIP36.99■■■■□ 3.51
MFSD9-207ENST00000462099 WRNQ14191 1432 aaPredicted RBP eCLIP36.98■■■■□ 3.51
MFSD9-207ENST00000462099 BIVM-ERCC5R4GMW8 1640 aa36.92■■■■□ 3.5
MFSD9-207ENST00000462099 TOP2BQ02880 1626 aa36.92■■■■□ 3.5
MFSD9-207ENST00000462099 TDRD9Q8NDG6 1382 aaKnown RBP36.91■■■■□ 3.5
MFSD9-207ENST00000462099 SYNJ1O43426 1573 aa36.88■■■■□ 3.49
MFSD9-207ENST00000462099 WDR97A6NE52 1622 aa36.88■■■■□ 3.49
MFSD9-207ENST00000462099 OSCARQ8IYS5 282 aa36.83■■■■□ 3.49
MFSD9-207ENST00000462099 ABCA10Q8WWZ4 1543 aa36.78■■■■□ 3.48
MFSD9-207ENST00000462099 GRIN2BQ13224 1484 aa36.68■■■■□ 3.46
MFSD9-207ENST00000462099 GAPVD1Q14C86 1478 aa36.68■■■■□ 3.46
MFSD9-207ENST00000462099 CHD1O14646 1710 aa36.64■■■■□ 3.46
MFSD9-207ENST00000462099 ABCA5Q8WWZ7 1642 aa36.63■■■■□ 3.45
MFSD9-207ENST00000462099 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
MFSD9-207ENST00000462099 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
MFSD9-207ENST00000462099 FBLN2P98095 1184 aa36.6■■■■□ 3.45
MFSD9-207ENST00000462099 MAGI1Q96QZ7 1491 aaPredicted RBP36.58■■■■□ 3.45
MFSD9-207ENST00000462099 CHMP7Q8WUX9 453 aaPredicted RBP36.49■■■■□ 3.43
MFSD9-207ENST00000462099 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
MFSD9-207ENST00000462099 ERICH3Q5RHP9 1530 aa36.34■■■■□ 3.41
MFSD9-207ENST00000462099 ADAMTS12P58397 1594 aa36.27■■■■□ 3.4
MFSD9-207ENST00000462099 FHAD1B1AJZ9 1412 aa36.25■■■■□ 3.39
MFSD9-207ENST00000462099 KIF27Q86VH2 1401 aa36.22■■■■□ 3.39
MFSD9-207ENST00000462099 RIMBP3CA6NJZ7 1639 aa36.21■■■■□ 3.39
MFSD9-207ENST00000462099 RIMBP3BA6NNM3 1639 aa36.21■■■■□ 3.39
MFSD9-207ENST00000462099 RIMBP3Q9UFD9 1639 aa36.21■■■■□ 3.39
MFSD9-207ENST00000462099 GRIN2AQ12879 1464 aa36.19■■■■□ 3.38
MFSD9-207ENST00000462099 CLASP1Q7Z460 1538 aa36.18■■■■□ 3.38
MFSD9-207ENST00000462099 ARHGEF11O15085 1522 aa36.17■■■■□ 3.38
MFSD9-207ENST00000462099 IGF1RP08069 1367 aa36.11■■■■□ 3.37
MFSD9-207ENST00000462099 TRIM41Q8WV44 630 aa36.09■■■■□ 3.37
MFSD9-207ENST00000462099 NUP160Q12769 1436 aa36.03■■■■□ 3.36
MFSD9-207ENST00000462099 CEP170Q5SW79 1584 aa36.02■■■■□ 3.36
MFSD9-207ENST00000462099 CUL7Q14999 1698 aa36.01■■■■□ 3.36
MFSD9-207ENST00000462099 CYB5RLQ6IPT4 315 aa35.9■■■■□ 3.34
MFSD9-207ENST00000462099 CARMIL1Q5VZK9 1371 aa35.89■■■■□ 3.34
MFSD9-207ENST00000462099 RUSC2Q8N2Y8 1516 aa35.88■■■■□ 3.33
MFSD9-207ENST00000462099 ARAP1Q96P48 1450 aa35.86■■■■□ 3.33
MFSD9-207ENST00000462099 SHROOM2Q13796 1616 aa35.79■■■■□ 3.32
MFSD9-207ENST00000462099 JPH4Q96JJ6 628 aa35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms