RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 NISCHQ9Y2I1 1504 aa24.91■■□□□ 1.58
SPTAN1-204ENST00000461855 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
SPTAN1-204ENST00000461855 ABCC9O60706 1549 aa21.66■■□□□ 1.06
SPTAN1-204ENST00000461855 NACADO15069 1562 aa20.85■□□□□ 0.93
SPTAN1-204ENST00000461855 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
SPTAN1-204ENST00000461855 MYO15BQ96JP2 1530 aa20.8■□□□□ 0.92
SPTAN1-204ENST00000461855 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
SPTAN1-204ENST00000461855 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
SPTAN1-204ENST00000461855 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
SPTAN1-204ENST00000461855 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.84
SPTAN1-204ENST00000461855 BICRAQ9NZM4 1560 aa20.27■□□□□ 0.84
SPTAN1-204ENST00000461855 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
SPTAN1-204ENST00000461855 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
SPTAN1-204ENST00000461855 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
SPTAN1-204ENST00000461855 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
SPTAN1-204ENST00000461855 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
SPTAN1-204ENST00000461855 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
SPTAN1-204ENST00000461855 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
SPTAN1-204ENST00000461855 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
SPTAN1-204ENST00000461855 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
SPTAN1-204ENST00000461855 BAZ1AQ9NRL2 1556 aaPredicted RBP19.29■□□□□ 0.68
SPTAN1-204ENST00000461855 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
SPTAN1-204ENST00000461855 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
SPTAN1-204ENST00000461855 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
SPTAN1-204ENST00000461855 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
SPTAN1-204ENST00000461855 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
SPTAN1-204ENST00000461855 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
SPTAN1-204ENST00000461855 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
SPTAN1-204ENST00000461855 WIZO95785 1651 aa18.92■□□□□ 0.62
SPTAN1-204ENST00000461855 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
SPTAN1-204ENST00000461855 NESP48681 1621 aa18.75■□□□□ 0.59
SPTAN1-204ENST00000461855 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
SPTAN1-204ENST00000461855 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
SPTAN1-204ENST00000461855 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
SPTAN1-204ENST00000461855 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
SPTAN1-204ENST00000461855 CFTRP13569 1480 aa18.59■□□□□ 0.57
SPTAN1-204ENST00000461855 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
SPTAN1-204ENST00000461855 CUX2O14529 1486 aa18.56■□□□□ 0.56
SPTAN1-204ENST00000461855 THOC2Q8NI27 1593 aaKnown RBP18.49■□□□□ 0.55
SPTAN1-204ENST00000461855 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
SPTAN1-204ENST00000461855 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
SPTAN1-204ENST00000461855 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
SPTAN1-204ENST00000461855 CEP164Q9UPV0 1460 aa18.4■□□□□ 0.54
SPTAN1-204ENST00000461855 WDR62O43379 1518 aa18.36■□□□□ 0.53
SPTAN1-204ENST00000461855 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
SPTAN1-204ENST00000461855 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
SPTAN1-204ENST00000461855 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
SPTAN1-204ENST00000461855 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
SPTAN1-204ENST00000461855 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
SPTAN1-204ENST00000461855 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
SPTAN1-204ENST00000461855 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.48
SPTAN1-204ENST00000461855 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
SPTAN1-204ENST00000461855 POLA1P09884 1462 aaPredicted RBP18■□□□□ 0.47
SPTAN1-204ENST00000461855 CUX1P39880 1505 aa17.99■□□□□ 0.47
SPTAN1-204ENST00000461855 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
SPTAN1-204ENST00000461855 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
SPTAN1-204ENST00000461855 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
SPTAN1-204ENST00000461855 SOGA1O94964 1423 aa17.92■□□□□ 0.46
SPTAN1-204ENST00000461855 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
SPTAN1-204ENST00000461855 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
SPTAN1-204ENST00000461855 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
SPTAN1-204ENST00000461855 AQRO60306 1485 aaKnown RBP eCLIP17.85■□□□□ 0.45
SPTAN1-204ENST00000461855 WDR97A6NE52 1622 aa17.83■□□□□ 0.45
SPTAN1-204ENST00000461855 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
SPTAN1-204ENST00000461855 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
SPTAN1-204ENST00000461855 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
SPTAN1-204ENST00000461855 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
SPTAN1-204ENST00000461855 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
SPTAN1-204ENST00000461855 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
SPTAN1-204ENST00000461855 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
SPTAN1-204ENST00000461855 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
SPTAN1-204ENST00000461855 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
SPTAN1-204ENST00000461855 MAGI1Q96QZ7 1491 aaPredicted RBP17.68■□□□□ 0.42
SPTAN1-204ENST00000461855 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
SPTAN1-204ENST00000461855 SYNJ2O15056 1496 aa17.61■□□□□ 0.41
SPTAN1-204ENST00000461855 CHD1O14646 1710 aa17.59■□□□□ 0.41
SPTAN1-204ENST00000461855 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
SPTAN1-204ENST00000461855 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
SPTAN1-204ENST00000461855 FBLN2P98095 1184 aa17.57■□□□□ 0.4
SPTAN1-204ENST00000461855 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
SPTAN1-204ENST00000461855 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
SPTAN1-204ENST00000461855 ADAMTS12P58397 1594 aa17.5■□□□□ 0.39
SPTAN1-204ENST00000461855 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
SPTAN1-204ENST00000461855 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
SPTAN1-204ENST00000461855 IGF1RP08069 1367 aa17.48■□□□□ 0.39
SPTAN1-204ENST00000461855 GRIN2AQ12879 1464 aa17.48■□□□□ 0.39
SPTAN1-204ENST00000461855 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
SPTAN1-204ENST00000461855 NUP160Q12769 1436 aa17.46■□□□□ 0.39
SPTAN1-204ENST00000461855 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
SPTAN1-204ENST00000461855 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
SPTAN1-204ENST00000461855 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
SPTAN1-204ENST00000461855 CEP170Q5SW79 1584 aa17.38■□□□□ 0.37
SPTAN1-204ENST00000461855 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
SPTAN1-204ENST00000461855 CUL7Q14999 1698 aa17.35■□□□□ 0.37
SPTAN1-204ENST00000461855 ARAP1Q96P48 1450 aa17.33■□□□□ 0.37
SPTAN1-204ENST00000461855 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.36
SPTAN1-204ENST00000461855 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
SPTAN1-204ENST00000461855 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
SPTAN1-204ENST00000461855 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
SPTAN1-204ENST00000461855 JPH4Q96JJ6 628 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms