RNA–Protein interactions for RNA: ENST00000461642.2

NINL-204, Transcript of ninein like, humanhuman

TSL 3

Gene NINL, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-204ENST00000461642 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
NINL-204ENST00000461642 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
NINL-204ENST00000461642 ABCC9O60706 1549 aa31.46■■■□□ 2.63
NINL-204ENST00000461642 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
NINL-204ENST00000461642 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
NINL-204ENST00000461642 NACADO15069 1562 aa30.23■■■□□ 2.43
NINL-204ENST00000461642 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
NINL-204ENST00000461642 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
NINL-204ENST00000461642 DCAF1Q9Y4B6 1507 aa29.94■■■□□ 2.38
NINL-204ENST00000461642 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
NINL-204ENST00000461642 UNC13AQ9UPW8 1703 aa29.35■■■□□ 2.29
NINL-204ENST00000461642 SCRIBQ14160 1630 aa29.27■■■□□ 2.28
NINL-204ENST00000461642 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.28
NINL-204ENST00000461642 SHROOM4Q9ULL8 1493 aa29.05■■■□□ 2.24
NINL-204ENST00000461642 DNAJC5BQ9UF47 199 aa28.92■■■□□ 2.22
NINL-204ENST00000461642 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
NINL-204ENST00000461642 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
NINL-204ENST00000461642 CECR2Q9BXF3 1484 aa28.29■■■□□ 2.12
NINL-204ENST00000461642 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
NINL-204ENST00000461642 SMARCA4P51532 1647 aa28■■■□□ 2.07
NINL-204ENST00000461642 NCAPD3P42695 1498 aa27.95■■■□□ 2.06
NINL-204ENST00000461642 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
NINL-204ENST00000461642 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
NINL-204ENST00000461642 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
NINL-204ENST00000461642 PEG3Q9GZU2 1588 aa27.75■■■□□ 2.03
NINL-204ENST00000461642 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
NINL-204ENST00000461642 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
NINL-204ENST00000461642 RSF1Q96T23 1441 aaPredicted RBP27.61■■■□□ 2.01
NINL-204ENST00000461642 WIZO95785 1651 aa27.49■■□□□ 1.99
NINL-204ENST00000461642 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.96
NINL-204ENST00000461642 NESP48681 1621 aa27.2■■□□□ 1.95
NINL-204ENST00000461642 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
NINL-204ENST00000461642 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
NINL-204ENST00000461642 LAMC3Q9Y6N6 1575 aa27.13■■□□□ 1.93
NINL-204ENST00000461642 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
NINL-204ENST00000461642 SUPT5HO00267 1087 aaKnown RBP26.99■■□□□ 1.91
NINL-204ENST00000461642 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
NINL-204ENST00000461642 CFTRP13569 1480 aa26.96■■□□□ 1.91
NINL-204ENST00000461642 CUX2O14529 1486 aa26.85■■□□□ 1.89
NINL-204ENST00000461642 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
NINL-204ENST00000461642 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
NINL-204ENST00000461642 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
NINL-204ENST00000461642 MRC2Q9UBG0 1479 aa26.72■■□□□ 1.87
NINL-204ENST00000461642 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
NINL-204ENST00000461642 WDR62O43379 1518 aa26.58■■□□□ 1.85
NINL-204ENST00000461642 PRDM2Q13029 1718 aa26.52■■□□□ 1.84
NINL-204ENST00000461642 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
NINL-204ENST00000461642 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
NINL-204ENST00000461642 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
NINL-204ENST00000461642 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
NINL-204ENST00000461642 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
NINL-204ENST00000461642 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
NINL-204ENST00000461642 CUX1P39880 1505 aa26.13■■□□□ 1.77
NINL-204ENST00000461642 SOGA1O94964 1423 aa26.09■■□□□ 1.77
NINL-204ENST00000461642 DNAJC5Q9H3Z4 198 aa26.09■■□□□ 1.77
NINL-204ENST00000461642 FGD5Q6ZNL6 1462 aa26.06■■□□□ 1.76
NINL-204ENST00000461642 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
NINL-204ENST00000461642 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
NINL-204ENST00000461642 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
NINL-204ENST00000461642 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
NINL-204ENST00000461642 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.74
NINL-204ENST00000461642 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
NINL-204ENST00000461642 TOP2BQ02880 1626 aa25.89■■□□□ 1.74
NINL-204ENST00000461642 EIF4G3O43432 1585 aaKnown RBP25.87■■□□□ 1.73
NINL-204ENST00000461642 SYNJ1O43426 1573 aa25.86■■□□□ 1.73
NINL-204ENST00000461642 OSCARQ8IYS5 282 aa25.85■■□□□ 1.73
NINL-204ENST00000461642 BIVM-ERCC5R4GMW8 1640 aa25.84■■□□□ 1.73
NINL-204ENST00000461642 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.72
NINL-204ENST00000461642 WDR97A6NE52 1622 aa25.82■■□□□ 1.72
NINL-204ENST00000461642 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
NINL-204ENST00000461642 GAPVD1Q14C86 1478 aa25.75■■□□□ 1.71
NINL-204ENST00000461642 FBLN2P98095 1184 aa25.72■■□□□ 1.71
NINL-204ENST00000461642 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
NINL-204ENST00000461642 MAGI1Q96QZ7 1491 aaPredicted RBP25.67■■□□□ 1.7
NINL-204ENST00000461642 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
NINL-204ENST00000461642 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
NINL-204ENST00000461642 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
NINL-204ENST00000461642 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
NINL-204ENST00000461642 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
NINL-204ENST00000461642 PBRM1Q86U86 1689 aa25.52■■□□□ 1.68
NINL-204ENST00000461642 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
NINL-204ENST00000461642 CHD1O14646 1710 aa25.49■■□□□ 1.67
NINL-204ENST00000461642 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
NINL-204ENST00000461642 IGF1RP08069 1367 aa25.44■■□□□ 1.66
NINL-204ENST00000461642 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
NINL-204ENST00000461642 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
NINL-204ENST00000461642 CLASP1Q7Z460 1538 aa25.31■■□□□ 1.64
NINL-204ENST00000461642 NUP160Q12769 1436 aa25.29■■□□□ 1.64
NINL-204ENST00000461642 ARHGEF11O15085 1522 aa25.29■■□□□ 1.64
NINL-204ENST00000461642 CARMIL1Q5VZK9 1371 aa25.29■■□□□ 1.64
NINL-204ENST00000461642 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
NINL-204ENST00000461642 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
NINL-204ENST00000461642 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
NINL-204ENST00000461642 RUSC2Q8N2Y8 1516 aa25.22■■□□□ 1.63
NINL-204ENST00000461642 CUL7Q14999 1698 aa25.21■■□□□ 1.63
NINL-204ENST00000461642 CEP170Q5SW79 1584 aa25.2■■□□□ 1.62
NINL-204ENST00000461642 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
NINL-204ENST00000461642 CYB5RLQ6IPT4 315 aa25.18■■□□□ 1.62
NINL-204ENST00000461642 JPH4Q96JJ6 628 aa25.13■■□□□ 1.61
NINL-204ENST00000461642 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms