RNA–Protein interactions for RNA: ENST00000461627.1

ARRDC1-204, Transcript of arrestin domain containing 1, humanhuman

TSL 2

Gene ARRDC1, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-204ENST00000461627 NISCHQ9Y2I1 1504 aa51.64■■■■■ 5.86
ARRDC1-204ENST00000461627 CCDC180Q9P1Z9 1646 aa46.08■■■■■ 4.97
ARRDC1-204ENST00000461627 ABCC9O60706 1549 aa45.92■■■■■ 4.94
ARRDC1-204ENST00000461627 RB1CC1Q8TDY2 1594 aa43.72■■■■■ 4.59
ARRDC1-204ENST00000461627 DCAF8L2P0C7V8 631 aa43.61■■■■■ 4.57
ARRDC1-204ENST00000461627 NACADO15069 1562 aa43.49■■■■■ 4.55
ARRDC1-204ENST00000461627 MYO15BQ96JP2 1530 aa42.95■■■■■ 4.47
ARRDC1-204ENST00000461627 PABPN1Q86U42 306 aaKnown RBP eCLIP42.88■■■■■ 4.45
ARRDC1-204ENST00000461627 ZCCHC6Q5VYS8 1495 aaKnown RBP42.87■■■■■ 4.45
ARRDC1-204ENST00000461627 DNAJC5BQ9UF47 199 aa42.8■■■■■ 4.44
ARRDC1-204ENST00000461627 UNC13AQ9UPW8 1703 aa42.8■■■■■ 4.44
ARRDC1-204ENST00000461627 DCAF1Q9Y4B6 1507 aa42.56■■■■■ 4.4
ARRDC1-204ENST00000461627 BICRAQ9NZM4 1560 aa42.52■■■■■ 4.4
ARRDC1-204ENST00000461627 SCRIBQ14160 1630 aa42.19■■■■■ 4.34
ARRDC1-204ENST00000461627 SHROOM4Q9ULL8 1493 aa41.78■■■■■ 4.28
ARRDC1-204ENST00000461627 CC2D2AQ9P2K1 1620 aa41.43■■■■■ 4.22
ARRDC1-204ENST00000461627 EIF4G1Q04637 1599 aaKnown RBP41.41■■■■■ 4.22
ARRDC1-204ENST00000461627 CECR2Q9BXF3 1484 aa41.26■■■■■ 4.2
ARRDC1-204ENST00000461627 SMARCA4P51532 1647 aa40.2■■■■■ 4.03
ARRDC1-204ENST00000461627 NCAPD3P42695 1498 aa40.18■■■■■ 4.02
ARRDC1-204ENST00000461627 ATAD2BQ9ULI0 1458 aa40.16■■■■■ 4.02
ARRDC1-204ENST00000461627 BAZ1AQ9NRL2 1556 aaPredicted RBP40.02■■■■■ 4
ARRDC1-204ENST00000461627 SMARCA2P51531 1590 aa40■■■■□ 3.99
ARRDC1-204ENST00000461627 HMGXB3Q12766 1538 aa39.89■■■■□ 3.98
ARRDC1-204ENST00000461627 MROH2BQ7Z745 1585 aa39.87■■■■□ 3.97
ARRDC1-204ENST00000461627 BAZ1BQ9UIG0 1483 aaKnown RBP39.79■■■■□ 3.96
ARRDC1-204ENST00000461627 PEG3Q9GZU2 1588 aa39.74■■■■□ 3.95
ARRDC1-204ENST00000461627 NESP48681 1621 aa39.58■■■■□ 3.93
ARRDC1-204ENST00000461627 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
ARRDC1-204ENST00000461627 WIZO95785 1651 aa39.41■■■■□ 3.9
ARRDC1-204ENST00000461627 CUX2O14529 1486 aa39.26■■■■□ 3.88
ARRDC1-204ENST00000461627 LAMC3Q9Y6N6 1575 aa39.19■■■■□ 3.86
ARRDC1-204ENST00000461627 RSF1Q96T23 1441 aaPredicted RBP39.16■■■■□ 3.86
ARRDC1-204ENST00000461627 CADPSQ9ULU8 1353 aa39.01■■■■□ 3.84
ARRDC1-204ENST00000461627 KIF21AQ7Z4S6 1674 aa39■■■■□ 3.83
ARRDC1-204ENST00000461627 THOC2Q8NI27 1593 aaKnown RBP38.99■■■■□ 3.83
ARRDC1-204ENST00000461627 PDS5BQ9NTI5 1447 aa38.97■■■■□ 3.83
ARRDC1-204ENST00000461627 DNAJC5Q9H3Z4 198 aa38.89■■■■□ 3.82
ARRDC1-204ENST00000461627 TOP2AP11388 1531 aaKnown RBP38.86■■■■□ 3.81
ARRDC1-204ENST00000461627 MRC2Q9UBG0 1479 aa38.65■■■■□ 3.78
ARRDC1-204ENST00000461627 CFTRP13569 1480 aa38.63■■■■□ 3.77
ARRDC1-204ENST00000461627 FANCD2Q9BXW9 1451 aa38.6■■■■□ 3.77
ARRDC1-204ENST00000461627 CEP164Q9UPV0 1460 aa38.57■■■■□ 3.76
ARRDC1-204ENST00000461627 WDR62O43379 1518 aa38.52■■■■□ 3.76
ARRDC1-204ENST00000461627 CCDC88BA6NC98 1476 aa38.48■■■■□ 3.75
ARRDC1-204ENST00000461627 URB2Q14146 1524 aaKnown RBP38.28■■■■□ 3.72
ARRDC1-204ENST00000461627 PRDM2Q13029 1718 aa38.21■■■■□ 3.71
ARRDC1-204ENST00000461627 TOPBP1Q92547 1522 aa37.91■■■■□ 3.66
ARRDC1-204ENST00000461627 SUPT5HO00267 1087 aaKnown RBP37.85■■■■□ 3.65
ARRDC1-204ENST00000461627 ZNF608Q9ULD9 1512 aaPredicted RBP37.78■■■■□ 3.64
ARRDC1-204ENST00000461627 IFT140Q96RY7 1462 aa37.77■■■■□ 3.64
ARRDC1-204ENST00000461627 DNMBPQ6XZF7 1577 aa37.76■■■■□ 3.64
ARRDC1-204ENST00000461627 ABCC8Q09428 1581 aa37.73■■■■□ 3.63
ARRDC1-204ENST00000461627 OSCARQ8IYS5 282 aa37.61■■■■□ 3.61
ARRDC1-204ENST00000461627 POLA1P09884 1462 aaPredicted RBP37.54■■■■□ 3.6
ARRDC1-204ENST00000461627 TARBP1Q13395 1621 aaKnown RBP37.53■■■■□ 3.6
ARRDC1-204ENST00000461627 EIF4G3O43432 1585 aaKnown RBP37.52■■■■□ 3.6
ARRDC1-204ENST00000461627 AQRO60306 1485 aaKnown RBP eCLIP37.49■■■■□ 3.592e-12■■■■■ 31
ARRDC1-204ENST00000461627 RAD54L2Q9Y4B4 1467 aa37.48■■■■□ 3.59
ARRDC1-204ENST00000461627 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
ARRDC1-204ENST00000461627 CUX1P39880 1505 aa37.42■■■■□ 3.58
ARRDC1-204ENST00000461627 SOGA1O94964 1423 aa37.39■■■■□ 3.58
ARRDC1-204ENST00000461627 FGD5Q6ZNL6 1462 aa37.39■■■■□ 3.58
ARRDC1-204ENST00000461627 TDRD9Q8NDG6 1382 aaKnown RBP37.33■■■■□ 3.57
ARRDC1-204ENST00000461627 FBLN2P98095 1184 aa37.2■■■■□ 3.55
ARRDC1-204ENST00000461627 CHD1O14646 1710 aa37.19■■■■□ 3.54
ARRDC1-204ENST00000461627 RIMBP3CA6NJZ7 1639 aa37.1■■■■□ 3.53
ARRDC1-204ENST00000461627 RIMBP3BA6NNM3 1639 aa37.1■■■■□ 3.53
ARRDC1-204ENST00000461627 RIMBP3Q9UFD9 1639 aa37.1■■■■□ 3.53
ARRDC1-204ENST00000461627 SNAPC4Q5SXM2 1469 aa37.08■■■■□ 3.53
ARRDC1-204ENST00000461627 WDR97A6NE52 1622 aa37.04■■■■□ 3.52
ARRDC1-204ENST00000461627 ARHGEF11O15085 1522 aa37■■■■□ 3.51
ARRDC1-204ENST00000461627 GRIN2BQ13224 1484 aa36.98■■■■□ 3.51
ARRDC1-204ENST00000461627 GAPVD1Q14C86 1478 aa36.93■■■■□ 3.5
ARRDC1-204ENST00000461627 ABCA10Q8WWZ4 1543 aa36.92■■■■□ 3.5
ARRDC1-204ENST00000461627 CHMP7Q8WUX9 453 aaPredicted RBP36.92■■■■□ 3.5
ARRDC1-204ENST00000461627 WRNQ14191 1432 aaPredicted RBP eCLIP36.92■■■■□ 3.5
ARRDC1-204ENST00000461627 MAGI1Q96QZ7 1491 aaPredicted RBP36.91■■■■□ 3.5
ARRDC1-204ENST00000461627 SYNJ1O43426 1573 aa36.91■■■■□ 3.5
ARRDC1-204ENST00000461627 PBRM1Q86U86 1689 aa36.87■■■■□ 3.49
ARRDC1-204ENST00000461627 TOP2BQ02880 1626 aa36.86■■■■□ 3.49
ARRDC1-204ENST00000461627 BIVM-ERCC5R4GMW8 1640 aa36.85■■■■□ 3.49
ARRDC1-204ENST00000461627 ABCA5Q8WWZ7 1642 aa36.84■■■■□ 3.49
ARRDC1-204ENST00000461627 SYNJ2O15056 1496 aa36.81■■■■□ 3.48
ARRDC1-204ENST00000461627 CYB5RLQ6IPT4 315 aa36.79■■■■□ 3.48
ARRDC1-204ENST00000461627 CLASP1Q7Z460 1538 aa36.74■■■■□ 3.47
ARRDC1-204ENST00000461627 ARAP1Q96P48 1450 aa36.69■■■■□ 3.46
ARRDC1-204ENST00000461627 ADAMTS12P58397 1594 aa36.55■■■■□ 3.44
ARRDC1-204ENST00000461627 GRIN2AQ12879 1464 aa36.52■■■■□ 3.44
ARRDC1-204ENST00000461627 FHAD1B1AJZ9 1412 aa36.45■■■■□ 3.43
ARRDC1-204ENST00000461627 ERICH3Q5RHP9 1530 aa36.44■■■■□ 3.42
ARRDC1-204ENST00000461627 CEP170Q5SW79 1584 aa36.41■■■■□ 3.42
ARRDC1-204ENST00000461627 NUP160Q12769 1436 aa36.36■■■■□ 3.41
ARRDC1-204ENST00000461627 ERCC6L2Q5T890 1561 aa36.31■■■■□ 3.4
ARRDC1-204ENST00000461627 TRHP20396 242 aaPredicted RBP36.27■■■■□ 3.4
ARRDC1-204ENST00000461627 KIF27Q86VH2 1401 aa36.16■■■■□ 3.38
ARRDC1-204ENST00000461627 IGF1RP08069 1367 aa36.15■■■■□ 3.38
ARRDC1-204ENST00000461627 SHROOM2Q13796 1616 aa36.15■■■■□ 3.38
ARRDC1-204ENST00000461627 JPH4Q96JJ6 628 aa36.05■■■■□ 3.36
ARRDC1-204ENST00000461627 PRG4Q92954 1404 aaPredicted RBP36.05■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms