RNA–Protein interactions for RNA: ENST00000461580.5

CAMTA1-203, Transcript of calmodulin binding transcription activator 1, humanhuman

TSL 3

Gene CAMTA1, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA1-203ENST00000461580 AEBP2Q6ZN18 517 aaPredicted RBP29.68■■■□□ 2.34
CAMTA1-203ENST00000461580 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
CAMTA1-203ENST00000461580 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
CAMTA1-203ENST00000461580 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
CAMTA1-203ENST00000461580 FOXD1Q16676 465 aa23.82■■□□□ 1.4
CAMTA1-203ENST00000461580 POTEDQ86YR6 584 aa23.51■■□□□ 1.35
CAMTA1-203ENST00000461580 MSH5O43196 834 aa22.61■■□□□ 1.21
CAMTA1-203ENST00000461580 PIAS4Q8N2W9 510 aaPredicted RBP22.12■■□□□ 1.13
CAMTA1-203ENST00000461580 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
CAMTA1-203ENST00000461580 ADRA2BP18089 450 aa21.56■■□□□ 1.04
CAMTA1-203ENST00000461580 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
CAMTA1-203ENST00000461580 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
CAMTA1-203ENST00000461580 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
CAMTA1-203ENST00000461580 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
CAMTA1-203ENST00000461580 CACNB1Q02641 598 aaPredicted RBP19.98■□□□□ 0.79
CAMTA1-203ENST00000461580 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
CAMTA1-203ENST00000461580 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
CAMTA1-203ENST00000461580 RNF39Q9H2S5 420 aa19.2■□□□□ 0.66
CAMTA1-203ENST00000461580 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
CAMTA1-203ENST00000461580 C1QBPQ07021 282 aaKnown RBP18.86■□□□□ 0.61
CAMTA1-203ENST00000461580 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
CAMTA1-203ENST00000461580 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
CAMTA1-203ENST00000461580 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
CAMTA1-203ENST00000461580 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
CAMTA1-203ENST00000461580 ABCC9O60706 1549 aa18.31■□□□□ 0.52
CAMTA1-203ENST00000461580 POTEHQ6S545 545 aa18.27■□□□□ 0.52
CAMTA1-203ENST00000461580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.5
CAMTA1-203ENST00000461580 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
CAMTA1-203ENST00000461580 NCBP3Q53F19 620 aaKnown RBP17.77■□□□□ 0.44
CAMTA1-203ENST00000461580 DSG3P32926 999 aa17.72■□□□□ 0.43
CAMTA1-203ENST00000461580 CAPN15O75808 1086 aa17.71■□□□□ 0.43
CAMTA1-203ENST00000461580 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
CAMTA1-203ENST00000461580 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
CAMTA1-203ENST00000461580 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
CAMTA1-203ENST00000461580 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
CAMTA1-203ENST00000461580 ABCB7O75027 752 aa17.24■□□□□ 0.35
CAMTA1-203ENST00000461580 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
CAMTA1-203ENST00000461580 NACADO15069 1562 aa17.17■□□□□ 0.34
CAMTA1-203ENST00000461580 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
CAMTA1-203ENST00000461580 APLP2Q06481 763 aa17.05■□□□□ 0.32
CAMTA1-203ENST00000461580 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
CAMTA1-203ENST00000461580 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
CAMTA1-203ENST00000461580 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
CAMTA1-203ENST00000461580 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
CAMTA1-203ENST00000461580 CHRDL2Q6WN34 429 aa16.92■□□□□ 0.3
CAMTA1-203ENST00000461580 MYO15BQ96JP2 1530 aa16.88■□□□□ 0.29
CAMTA1-203ENST00000461580 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
CAMTA1-203ENST00000461580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.82■□□□□ 0.28
CAMTA1-203ENST00000461580 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
CAMTA1-203ENST00000461580 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
CAMTA1-203ENST00000461580 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
CAMTA1-203ENST00000461580 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
CAMTA1-203ENST00000461580 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
CAMTA1-203ENST00000461580 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
CAMTA1-203ENST00000461580 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
CAMTA1-203ENST00000461580 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
CAMTA1-203ENST00000461580 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
CAMTA1-203ENST00000461580 POLA2Q14181 598 aa16.52■□□□□ 0.24
CAMTA1-203ENST00000461580 KCNA4P22459 653 aa16.46■□□□□ 0.23
CAMTA1-203ENST00000461580 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
CAMTA1-203ENST00000461580 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
CAMTA1-203ENST00000461580 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
CAMTA1-203ENST00000461580 PIP4P2Q8N4L2 257 aa16.33■□□□□ 0.2
CAMTA1-203ENST00000461580 HAX1O00165 279 aa16.31■□□□□ 0.2
CAMTA1-203ENST00000461580 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
CAMTA1-203ENST00000461580 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
CAMTA1-203ENST00000461580 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
CAMTA1-203ENST00000461580 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
CAMTA1-203ENST00000461580 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
CAMTA1-203ENST00000461580 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
CAMTA1-203ENST00000461580 FXR2P51116 673 aaKnown RBP eCLIP16.06■□□□□ 0.16
CAMTA1-203ENST00000461580 EVX2Q03828 476 aa16■□□□□ 0.15
CAMTA1-203ENST00000461580 CUX2O14529 1486 aa15.97■□□□□ 0.15
CAMTA1-203ENST00000461580 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
CAMTA1-203ENST00000461580 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
CAMTA1-203ENST00000461580 NCAPD3P42695 1498 aa15.84■□□□□ 0.13
CAMTA1-203ENST00000461580 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
CAMTA1-203ENST00000461580 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
CAMTA1-203ENST00000461580 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
CAMTA1-203ENST00000461580 LHX8Q68G74 356 aa15.7■□□□□ 0.1
CAMTA1-203ENST00000461580 PRKAR2AP13861 404 aaKnown RBP15.68■□□□□ 0.1
CAMTA1-203ENST00000461580 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
CAMTA1-203ENST00000461580 NESP48681 1621 aa15.63■□□□□ 0.09
CAMTA1-203ENST00000461580 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
CAMTA1-203ENST00000461580 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
CAMTA1-203ENST00000461580 C19orf67A6NJJ6 358 aa15.58■□□□□ 0.08
CAMTA1-203ENST00000461580 GABBR2O75899 941 aa15.58■□□□□ 0.08
CAMTA1-203ENST00000461580 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
CAMTA1-203ENST00000461580 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
CAMTA1-203ENST00000461580 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
CAMTA1-203ENST00000461580 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
CAMTA1-203ENST00000461580 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
CAMTA1-203ENST00000461580 SPDYE2BA6NHP3 402 aa15.51■□□□□ 0.07
CAMTA1-203ENST00000461580 SPDYE6P0CI01 402 aa15.51■□□□□ 0.07
CAMTA1-203ENST00000461580 SPDYE2Q495Y8 402 aa15.51■□□□□ 0.07
CAMTA1-203ENST00000461580 PLSCR2Q9NRY7 297 aa15.5■□□□□ 0.07
CAMTA1-203ENST00000461580 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
CAMTA1-203ENST00000461580 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
CAMTA1-203ENST00000461580 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
CAMTA1-203ENST00000461580 FBLN2P98095 1184 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms