RNA–Protein interactions for RNA: ENST00000461511.1

MITF-213, Transcript of melanogenesis associated transcription factor, humanhuman

TSL 4

Gene MITF, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-213ENST00000461511 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
MITF-213ENST00000461511 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
MITF-213ENST00000461511 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
MITF-213ENST00000461511 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
MITF-213ENST00000461511 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
MITF-213ENST00000461511 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
MITF-213ENST00000461511 ABCC9O60706 1549 aa20.1■□□□□ 0.81
MITF-213ENST00000461511 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
MITF-213ENST00000461511 NACADO15069 1562 aa19.91■□□□□ 0.78
MITF-213ENST00000461511 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
MITF-213ENST00000461511 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
MITF-213ENST00000461511 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
MITF-213ENST00000461511 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
MITF-213ENST00000461511 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
MITF-213ENST00000461511 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
MITF-213ENST00000461511 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
MITF-213ENST00000461511 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
MITF-213ENST00000461511 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
MITF-213ENST00000461511 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
MITF-213ENST00000461511 SMARCA4P51532 1647 aa18.77■□□□□ 0.6
MITF-213ENST00000461511 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
MITF-213ENST00000461511 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.58
MITF-213ENST00000461511 SUPT5HO00267 1087 aaKnown RBP18.63■□□□□ 0.57
MITF-213ENST00000461511 WIZO95785 1651 aa18.6■□□□□ 0.57
MITF-213ENST00000461511 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
MITF-213ENST00000461511 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
MITF-213ENST00000461511 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
MITF-213ENST00000461511 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
MITF-213ENST00000461511 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.54
MITF-213ENST00000461511 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
MITF-213ENST00000461511 HMGXB3Q12766 1538 aa18.37■□□□□ 0.53
MITF-213ENST00000461511 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
MITF-213ENST00000461511 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
MITF-213ENST00000461511 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
MITF-213ENST00000461511 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
MITF-213ENST00000461511 CFTRP13569 1480 aa17.9■□□□□ 0.46
MITF-213ENST00000461511 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
MITF-213ENST00000461511 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
MITF-213ENST00000461511 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
MITF-213ENST00000461511 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
MITF-213ENST00000461511 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
MITF-213ENST00000461511 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
MITF-213ENST00000461511 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
MITF-213ENST00000461511 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
MITF-213ENST00000461511 NESP48681 1621 aa17.65■□□□□ 0.42
MITF-213ENST00000461511 TOP2BQ02880 1626 aa17.63■□□□□ 0.41
MITF-213ENST00000461511 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
MITF-213ENST00000461511 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
MITF-213ENST00000461511 CUX1P39880 1505 aa17.57■□□□□ 0.4
MITF-213ENST00000461511 PDS5BQ9NTI5 1447 aa17.53■□□□□ 0.4
MITF-213ENST00000461511 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
MITF-213ENST00000461511 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
MITF-213ENST00000461511 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
MITF-213ENST00000461511 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
MITF-213ENST00000461511 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
MITF-213ENST00000461511 EEA1Q15075 1411 aa17.39■□□□□ 0.38
MITF-213ENST00000461511 SOGA1O94964 1423 aa17.36■□□□□ 0.37
MITF-213ENST00000461511 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
MITF-213ENST00000461511 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
MITF-213ENST00000461511 WDR62O43379 1518 aa17.33■□□□□ 0.37
MITF-213ENST00000461511 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
MITF-213ENST00000461511 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
MITF-213ENST00000461511 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
MITF-213ENST00000461511 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
MITF-213ENST00000461511 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.36
MITF-213ENST00000461511 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
MITF-213ENST00000461511 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
MITF-213ENST00000461511 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
MITF-213ENST00000461511 KIF21BO75037 1637 aa17.21■□□□□ 0.35
MITF-213ENST00000461511 CUX2O14529 1486 aa17.2■□□□□ 0.34
MITF-213ENST00000461511 FOXD1Q16676 465 aa17.2■□□□□ 0.34
MITF-213ENST00000461511 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
MITF-213ENST00000461511 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
MITF-213ENST00000461511 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
MITF-213ENST00000461511 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
MITF-213ENST00000461511 PRXQ9BXM0 1461 aa17.15■□□□□ 0.34
MITF-213ENST00000461511 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
MITF-213ENST00000461511 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
MITF-213ENST00000461511 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
MITF-213ENST00000461511 IGF1RP08069 1367 aa17.1■□□□□ 0.33
MITF-213ENST00000461511 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
MITF-213ENST00000461511 CUL7Q14999 1698 aa17.07■□□□□ 0.32
MITF-213ENST00000461511 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
MITF-213ENST00000461511 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
MITF-213ENST00000461511 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
MITF-213ENST00000461511 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
MITF-213ENST00000461511 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
MITF-213ENST00000461511 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
MITF-213ENST00000461511 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
MITF-213ENST00000461511 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
MITF-213ENST00000461511 GRIN2BQ13224 1484 aa16.95■□□□□ 0.3
MITF-213ENST00000461511 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
MITF-213ENST00000461511 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
MITF-213ENST00000461511 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
MITF-213ENST00000461511 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
MITF-213ENST00000461511 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
MITF-213ENST00000461511 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
MITF-213ENST00000461511 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
MITF-213ENST00000461511 UBTFP17480 764 aaKnown RBP16.82■□□□□ 0.28
MITF-213ENST00000461511 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms