RNA–Protein interactions for RNA: ENST00000461488.5

SMIM7-204, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-204ENST00000461488 NISCHQ9Y2I1 1504 aa24.47■■□□□ 1.51
SMIM7-204ENST00000461488 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
SMIM7-204ENST00000461488 ABCC9O60706 1549 aa20.94■□□□□ 0.94
SMIM7-204ENST00000461488 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
SMIM7-204ENST00000461488 NACADO15069 1562 aa20.38■□□□□ 0.85
SMIM7-204ENST00000461488 RB1CC1Q8TDY2 1594 aa20.37■□□□□ 0.85
SMIM7-204ENST00000461488 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
SMIM7-204ENST00000461488 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
SMIM7-204ENST00000461488 DCAF8L2P0C7V8 631 aa20.18■□□□□ 0.82
SMIM7-204ENST00000461488 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.79
SMIM7-204ENST00000461488 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
SMIM7-204ENST00000461488 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
SMIM7-204ENST00000461488 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
SMIM7-204ENST00000461488 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMIM7-204ENST00000461488 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
SMIM7-204ENST00000461488 EIF4G1Q04637 1599 aaKnown RBP19.16■□□□□ 0.66
SMIM7-204ENST00000461488 CC2D2AQ9P2K1 1620 aa19.03■□□□□ 0.64
SMIM7-204ENST00000461488 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
SMIM7-204ENST00000461488 SMARCA4P51532 1647 aa19■□□□□ 0.63
SMIM7-204ENST00000461488 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
SMIM7-204ENST00000461488 SMARCA2P51531 1590 aa18.84■□□□□ 0.61
SMIM7-204ENST00000461488 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
SMIM7-204ENST00000461488 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.6
SMIM7-204ENST00000461488 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
SMIM7-204ENST00000461488 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
SMIM7-204ENST00000461488 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
SMIM7-204ENST00000461488 WIZO95785 1651 aa18.7■□□□□ 0.58
SMIM7-204ENST00000461488 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
SMIM7-204ENST00000461488 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
SMIM7-204ENST00000461488 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
SMIM7-204ENST00000461488 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
SMIM7-204ENST00000461488 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
SMIM7-204ENST00000461488 PRDM2Q13029 1718 aa18.28■□□□□ 0.52
SMIM7-204ENST00000461488 SUPT5HO00267 1087 aaKnown RBP18.25■□□□□ 0.51
SMIM7-204ENST00000461488 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
SMIM7-204ENST00000461488 NESP48681 1621 aa18.17■□□□□ 0.5
SMIM7-204ENST00000461488 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
SMIM7-204ENST00000461488 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
SMIM7-204ENST00000461488 CFTRP13569 1480 aa18.13■□□□□ 0.49
SMIM7-204ENST00000461488 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.49
SMIM7-204ENST00000461488 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
SMIM7-204ENST00000461488 THOC2Q8NI27 1593 aaKnown RBP17.99■□□□□ 0.47
SMIM7-204ENST00000461488 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
SMIM7-204ENST00000461488 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
SMIM7-204ENST00000461488 DNAJC5Q9H3Z4 198 aa17.92■□□□□ 0.46
SMIM7-204ENST00000461488 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
SMIM7-204ENST00000461488 WDR62O43379 1518 aa17.86■□□□□ 0.45
SMIM7-204ENST00000461488 CUX2O14529 1486 aa17.85■□□□□ 0.45
SMIM7-204ENST00000461488 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
SMIM7-204ENST00000461488 DNMBPQ6XZF7 1577 aa17.79■□□□□ 0.44
SMIM7-204ENST00000461488 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
SMIM7-204ENST00000461488 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
SMIM7-204ENST00000461488 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
SMIM7-204ENST00000461488 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
SMIM7-204ENST00000461488 CUX1P39880 1505 aa17.67■□□□□ 0.42
SMIM7-204ENST00000461488 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
SMIM7-204ENST00000461488 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
SMIM7-204ENST00000461488 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
SMIM7-204ENST00000461488 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.41
SMIM7-204ENST00000461488 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.4
SMIM7-204ENST00000461488 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
SMIM7-204ENST00000461488 IFT140Q96RY7 1462 aa17.57■□□□□ 0.4
SMIM7-204ENST00000461488 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
SMIM7-204ENST00000461488 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
SMIM7-204ENST00000461488 SOGA1O94964 1423 aa17.48■□□□□ 0.39
SMIM7-204ENST00000461488 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
SMIM7-204ENST00000461488 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
SMIM7-204ENST00000461488 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
SMIM7-204ENST00000461488 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
SMIM7-204ENST00000461488 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
SMIM7-204ENST00000461488 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMIM7-204ENST00000461488 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
SMIM7-204ENST00000461488 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
SMIM7-204ENST00000461488 GRIN2BQ13224 1484 aa17.3■□□□□ 0.36
SMIM7-204ENST00000461488 CHD1O14646 1710 aa17.28■□□□□ 0.36
SMIM7-204ENST00000461488 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
SMIM7-204ENST00000461488 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
SMIM7-204ENST00000461488 MAGI1Q96QZ7 1491 aaPredicted RBP17.26■□□□□ 0.35
SMIM7-204ENST00000461488 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
SMIM7-204ENST00000461488 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
SMIM7-204ENST00000461488 CUL7Q14999 1698 aa17.23■□□□□ 0.35
SMIM7-204ENST00000461488 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
SMIM7-204ENST00000461488 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
SMIM7-204ENST00000461488 FHAD1B1AJZ9 1412 aa17.12■□□□□ 0.33
SMIM7-204ENST00000461488 EEA1Q15075 1411 aa17.1■□□□□ 0.33
SMIM7-204ENST00000461488 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
SMIM7-204ENST00000461488 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
SMIM7-204ENST00000461488 IGF1RP08069 1367 aa17.07■□□□□ 0.32
SMIM7-204ENST00000461488 CHMP7Q8WUX9 453 aaPredicted RBP17.06■□□□□ 0.32
SMIM7-204ENST00000461488 FBLN2P98095 1184 aa17.04■□□□□ 0.32
SMIM7-204ENST00000461488 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
SMIM7-204ENST00000461488 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
SMIM7-204ENST00000461488 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
SMIM7-204ENST00000461488 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
SMIM7-204ENST00000461488 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
SMIM7-204ENST00000461488 NUP160Q12769 1436 aa16.98■□□□□ 0.31
SMIM7-204ENST00000461488 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
SMIM7-204ENST00000461488 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
SMIM7-204ENST00000461488 KIF21BO75037 1637 aa16.95■□□□□ 0.3
SMIM7-204ENST00000461488 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms