RNA–Protein interactions for RNA: ENST00000461267.1

SLC25A1-203, Transcript of solute carrier family 25 member 1, humanhuman

TSL 3

Gene SLC25A1, Length 804 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1-203ENST00000461267 NISCHQ9Y2I1 1504 aa58.47■■■■■ 6.95
SLC25A1-203ENST00000461267 ABCC9O60706 1549 aa52.42■■■■■ 5.98
SLC25A1-203ENST00000461267 CCDC180Q9P1Z9 1646 aa52.33■■■■■ 5.97
SLC25A1-203ENST00000461267 RB1CC1Q8TDY2 1594 aa49.83■■■■■ 5.57
SLC25A1-203ENST00000461267 DCAF8L2P0C7V8 631 aa49.51■■■■■ 5.52
SLC25A1-203ENST00000461267 NACADO15069 1562 aa49.5■■■■■ 5.52
SLC25A1-203ENST00000461267 DNAJC5BQ9UF47 199 aa49.2■■■■■ 5.47
SLC25A1-203ENST00000461267 PABPN1Q86U42 306 aaKnown RBP eCLIP48.9■■■■■ 5.42
SLC25A1-203ENST00000461267 MYO15BQ96JP2 1530 aa48.8■■■■■ 5.4
SLC25A1-203ENST00000461267 UNC13AQ9UPW8 1703 aa48.7■■■■■ 5.39
SLC25A1-203ENST00000461267 ZCCHC6Q5VYS8 1495 aaKnown RBP48.43■■■■■ 5.34
SLC25A1-203ENST00000461267 BICRAQ9NZM4 1560 aa48.41■■■■■ 5.34
SLC25A1-203ENST00000461267 DCAF1Q9Y4B6 1507 aa48.22■■■■■ 5.31
SLC25A1-203ENST00000461267 SCRIBQ14160 1630 aa47.79■■■■■ 5.24
SLC25A1-203ENST00000461267 SHROOM4Q9ULL8 1493 aa47.64■■■■■ 5.22
SLC25A1-203ENST00000461267 CC2D2AQ9P2K1 1620 aa47.3■■■■■ 5.16
SLC25A1-203ENST00000461267 EIF4G1Q04637 1599 aaKnown RBP47.2■■■■■ 5.15
SLC25A1-203ENST00000461267 CECR2Q9BXF3 1484 aa47.18■■■■■ 5.14
SLC25A1-203ENST00000461267 NCAPD3P42695 1498 aa45.74■■■■■ 4.91
SLC25A1-203ENST00000461267 ATAD2BQ9ULI0 1458 aa45.62■■■■■ 4.89
SLC25A1-203ENST00000461267 SMARCA4P51532 1647 aa45.56■■■■■ 4.88
SLC25A1-203ENST00000461267 SMARCA2P51531 1590 aa45.45■■■■■ 4.87
SLC25A1-203ENST00000461267 BAZ1AQ9NRL2 1556 aaPredicted RBP45.34■■■■■ 4.85
SLC25A1-203ENST00000461267 HMGXB3Q12766 1538 aa45.34■■■■■ 4.85
SLC25A1-203ENST00000461267 ERCC6Q03468 1493 aa45.22■■■■■ 4.83
SLC25A1-203ENST00000461267 BAZ1BQ9UIG0 1483 aaKnown RBP45.17■■■■■ 4.82
SLC25A1-203ENST00000461267 MROH2BQ7Z745 1585 aa45.09■■■■■ 4.81
SLC25A1-203ENST00000461267 PEG3Q9GZU2 1588 aa45.08■■■■■ 4.81
SLC25A1-203ENST00000461267 NESP48681 1621 aa45.06■■■■■ 4.8
SLC25A1-203ENST00000461267 DNAJC5Q9H3Z4 198 aa45.06■■■■■ 4.8
SLC25A1-203ENST00000461267 CUX2O14529 1486 aa45.04■■■■■ 4.8
SLC25A1-203ENST00000461267 LAMC3Q9Y6N6 1575 aa44.65■■■■■ 4.74
SLC25A1-203ENST00000461267 WIZO95785 1651 aa44.54■■■■■ 4.72
SLC25A1-203ENST00000461267 THOC2Q8NI27 1593 aaKnown RBP44.48■■■■■ 4.71
SLC25A1-203ENST00000461267 PDS5BQ9NTI5 1447 aa44.44■■■■■ 4.7
SLC25A1-203ENST00000461267 KIF21AQ7Z4S6 1674 aa44.41■■■■■ 4.7
SLC25A1-203ENST00000461267 CADPSQ9ULU8 1353 aa44.38■■■■■ 4.69
SLC25A1-203ENST00000461267 RSF1Q96T23 1441 aaPredicted RBP44.19■■■■■ 4.66
SLC25A1-203ENST00000461267 MRC2Q9UBG0 1479 aa44.03■■■■■ 4.64
SLC25A1-203ENST00000461267 TOP2AP11388 1531 aaKnown RBP43.94■■■■■ 4.62
SLC25A1-203ENST00000461267 WDR62O43379 1518 aa43.9■■■■■ 4.62
SLC25A1-203ENST00000461267 CEP164Q9UPV0 1460 aa43.88■■■■■ 4.61
SLC25A1-203ENST00000461267 CFTRP13569 1480 aa43.87■■■■■ 4.61
SLC25A1-203ENST00000461267 FANCD2Q9BXW9 1451 aa43.87■■■■■ 4.61
SLC25A1-203ENST00000461267 CCDC88BA6NC98 1476 aa43.51■■■■■ 4.56
SLC25A1-203ENST00000461267 URB2Q14146 1524 aaKnown RBP43.51■■■■■ 4.56
SLC25A1-203ENST00000461267 PRDM2Q13029 1718 aa43.33■■■■■ 4.53
SLC25A1-203ENST00000461267 TRIM41Q8WV44 630 aa43.17■■■■■ 4.5
SLC25A1-203ENST00000461267 OSCARQ8IYS5 282 aa43.12■■■■■ 4.49
SLC25A1-203ENST00000461267 TOPBP1Q92547 1522 aa43.04■■■■■ 4.48
SLC25A1-203ENST00000461267 IFT140Q96RY7 1462 aa43■■■■■ 4.47
SLC25A1-203ENST00000461267 ZNF608Q9ULD9 1512 aaPredicted RBP42.98■■■■■ 4.47
SLC25A1-203ENST00000461267 ABCC8Q09428 1581 aa42.91■■■■■ 4.46
SLC25A1-203ENST00000461267 DNMBPQ6XZF7 1577 aa42.85■■■■■ 4.45
SLC25A1-203ENST00000461267 EIF4G3O43432 1585 aaKnown RBP42.68■■■■■ 4.42
SLC25A1-203ENST00000461267 AQRO60306 1485 aaKnown RBP eCLIP42.63■■■■■ 4.424e-9■■■□□ 16.3
SLC25A1-203ENST00000461267 TARBP1Q13395 1621 aaKnown RBP42.63■■■■■ 4.41
SLC25A1-203ENST00000461267 POLA1P09884 1462 aaPredicted RBP42.61■■■■■ 4.41
SLC25A1-203ENST00000461267 RAD54L2Q9Y4B4 1467 aa42.51■■■■■ 4.4
SLC25A1-203ENST00000461267 RIMBP3CA6NJZ7 1639 aa42.48■■■■■ 4.39
SLC25A1-203ENST00000461267 RIMBP3BA6NNM3 1639 aa42.48■■■■■ 4.39
SLC25A1-203ENST00000461267 RIMBP3Q9UFD9 1639 aa42.48■■■■■ 4.39
SLC25A1-203ENST00000461267 SOGA1O94964 1423 aa42.46■■■■■ 4.39
SLC25A1-203ENST00000461267 SUPT5HO00267 1087 aaKnown RBP42.42■■■■■ 4.38
SLC25A1-203ENST00000461267 TDRD9Q8NDG6 1382 aaKnown RBP42.4■■■■■ 4.38
SLC25A1-203ENST00000461267 FBLN2P98095 1184 aa42.39■■■■■ 4.38
SLC25A1-203ENST00000461267 FGD5Q6ZNL6 1462 aa42.36■■■■■ 4.37
SLC25A1-203ENST00000461267 CHD1O14646 1710 aa42.35■■■■■ 4.37
SLC25A1-203ENST00000461267 ARHGEF11O15085 1522 aa42.35■■■■■ 4.37
SLC25A1-203ENST00000461267 CUX1P39880 1505 aa42.33■■■■■ 4.37
SLC25A1-203ENST00000461267 CYB5RLQ6IPT4 315 aa42.16■■■■■ 4.34
SLC25A1-203ENST00000461267 SNAPC4Q5SXM2 1469 aa42.15■■■■■ 4.34
SLC25A1-203ENST00000461267 WDR97A6NE52 1622 aa42.11■■■■■ 4.33
SLC25A1-203ENST00000461267 CHMP7Q8WUX9 453 aaPredicted RBP42.06■■■■■ 4.32
SLC25A1-203ENST00000461267 GRIN2BQ13224 1484 aa42.04■■■■■ 4.32
SLC25A1-203ENST00000461267 MAGI1Q96QZ7 1491 aaPredicted RBP41.99■■■■■ 4.31
SLC25A1-203ENST00000461267 ARAP1Q96P48 1450 aa41.95■■■■■ 4.31
SLC25A1-203ENST00000461267 GAPVD1Q14C86 1478 aa41.91■■■■■ 4.3
SLC25A1-203ENST00000461267 SYNJ2O15056 1496 aa41.87■■■■■ 4.29
SLC25A1-203ENST00000461267 CLASP1Q7Z460 1538 aa41.86■■■■■ 4.29
SLC25A1-203ENST00000461267 ABCA10Q8WWZ4 1543 aa41.85■■■■■ 4.29
SLC25A1-203ENST00000461267 SYNJ1O43426 1573 aa41.84■■■■■ 4.29
SLC25A1-203ENST00000461267 PBRM1Q86U86 1689 aa41.83■■■■■ 4.29
SLC25A1-203ENST00000461267 ABCA5Q8WWZ7 1642 aa41.76■■■■■ 4.28
SLC25A1-203ENST00000461267 WRNQ14191 1432 aaPredicted RBP eCLIP41.73■■■■■ 4.27
SLC25A1-203ENST00000461267 TRHP20396 242 aaPredicted RBP41.67■■■■■ 4.26
SLC25A1-203ENST00000461267 TOP2BQ02880 1626 aa41.64■■■■■ 4.26
SLC25A1-203ENST00000461267 BIVM-ERCC5R4GMW8 1640 aa41.62■■■■■ 4.25
SLC25A1-203ENST00000461267 GRIN2AQ12879 1464 aa41.49■■■■■ 4.23
SLC25A1-203ENST00000461267 ADAMTS12P58397 1594 aa41.43■■■■■ 4.22
SLC25A1-203ENST00000461267 FHAD1B1AJZ9 1412 aa41.37■■■■■ 4.21
SLC25A1-203ENST00000461267 CEP170Q5SW79 1584 aa41.34■■■■■ 4.21
SLC25A1-203ENST00000461267 NUP160Q12769 1436 aa41.34■■■■■ 4.21
SLC25A1-203ENST00000461267 ERICH3Q5RHP9 1530 aa41.31■■■■■ 4.2
SLC25A1-203ENST00000461267 ERCC6L2Q5T890 1561 aa41.29■■■■■ 4.2
SLC25A1-203ENST00000461267 SHROOM2Q13796 1616 aa41.11■■■■■ 4.17
SLC25A1-203ENST00000461267 JPH4Q96JJ6 628 aa41.02■■■■■ 4.16
SLC25A1-203ENST00000461267 PRG4Q92954 1404 aaPredicted RBP41■■■■■ 4.15
SLC25A1-203ENST00000461267 IGF1RP08069 1367 aa40.9■■■■■ 4.14
SLC25A1-203ENST00000461267 KIF27Q86VH2 1401 aa40.87■■■■■ 4.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms