RNA–Protein interactions for RNA: ENST00000461123.1

PDXK-208, Transcript of pyridoxal kinase, humanhuman

TSL 3

Gene PDXK, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXK-208ENST00000461123 NISCHQ9Y2I1 1504 aa40.11■■■■■ 4.01
PDXK-208ENST00000461123 ABCC9O60706 1549 aa36.89■■■■□ 3.5
PDXK-208ENST00000461123 CCDC180Q9P1Z9 1646 aa36.02■■■■□ 3.36
PDXK-208ENST00000461123 DNAJC5BQ9UF47 199 aa35.32■■■■□ 3.24
PDXK-208ENST00000461123 RB1CC1Q8TDY2 1594 aa34.72■■■■□ 3.15
PDXK-208ENST00000461123 PABPN1Q86U42 306 aaKnown RBP eCLIP34.4■■■■□ 3.11e-5■□□□□ 8.6
PDXK-208ENST00000461123 NACADO15069 1562 aa34.36■■■■□ 3.09
PDXK-208ENST00000461123 DCAF8L2P0C7V8 631 aa34.35■■■■□ 3.09
PDXK-208ENST00000461123 BICRAQ9NZM4 1560 aa33.76■■■□□ 2.99
PDXK-208ENST00000461123 MYO15BQ96JP2 1530 aa33.71■■■□□ 2.99
PDXK-208ENST00000461123 UNC13AQ9UPW8 1703 aa33.7■■■□□ 2.99
PDXK-208ENST00000461123 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
PDXK-208ENST00000461123 SHROOM4Q9ULL8 1493 aa33.21■■■□□ 2.91
PDXK-208ENST00000461123 CC2D2AQ9P2K1 1620 aa33.18■■■□□ 2.9
PDXK-208ENST00000461123 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
PDXK-208ENST00000461123 DCAF1Q9Y4B6 1507 aa33.05■■■□□ 2.88
PDXK-208ENST00000461123 EIF4G1Q04637 1599 aaKnown RBP32.98■■■□□ 2.87
PDXK-208ENST00000461123 SCRIBQ14160 1630 aa32.91■■■□□ 2.86
PDXK-208ENST00000461123 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
PDXK-208ENST00000461123 CUX2O14529 1486 aa31.99■■■□□ 2.71
PDXK-208ENST00000461123 ERCC6Q03468 1493 aa31.87■■■□□ 2.69
PDXK-208ENST00000461123 NCAPD3P42695 1498 aa31.85■■■□□ 2.69
PDXK-208ENST00000461123 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
PDXK-208ENST00000461123 NESP48681 1621 aa31.51■■■□□ 2.63
PDXK-208ENST00000461123 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
PDXK-208ENST00000461123 HMGXB3Q12766 1538 aa31.41■■■□□ 2.62
PDXK-208ENST00000461123 SMARCA4P51532 1647 aa31.31■■■□□ 2.6
PDXK-208ENST00000461123 BAZ1BQ9UIG0 1483 aaKnown RBP31.26■■■□□ 2.59
PDXK-208ENST00000461123 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
PDXK-208ENST00000461123 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
PDXK-208ENST00000461123 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
PDXK-208ENST00000461123 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
PDXK-208ENST00000461123 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.56
PDXK-208ENST00000461123 PEG3Q9GZU2 1588 aa31.04■■■□□ 2.56
PDXK-208ENST00000461123 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
PDXK-208ENST00000461123 CADPSQ9ULU8 1353 aa30.9■■■□□ 2.54
PDXK-208ENST00000461123 KIF21AQ7Z4S6 1674 aa30.85■■■□□ 2.53
PDXK-208ENST00000461123 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
PDXK-208ENST00000461123 WDR62O43379 1518 aa30.65■■■□□ 2.5
PDXK-208ENST00000461123 OSCARQ8IYS5 282 aa30.62■■■□□ 2.49
PDXK-208ENST00000461123 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.48
PDXK-208ENST00000461123 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
PDXK-208ENST00000461123 WIZO95785 1651 aa30.41■■■□□ 2.46
PDXK-208ENST00000461123 CFTRP13569 1480 aa30.36■■■□□ 2.45
PDXK-208ENST00000461123 URB2Q14146 1524 aaKnown RBP30.24■■■□□ 2.43
PDXK-208ENST00000461123 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
PDXK-208ENST00000461123 RIMBP3CA6NJZ7 1639 aa30.02■■■□□ 2.4
PDXK-208ENST00000461123 RIMBP3BA6NNM3 1639 aa30.02■■■□□ 2.4
PDXK-208ENST00000461123 RIMBP3Q9UFD9 1639 aa30.02■■■□□ 2.4
PDXK-208ENST00000461123 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.39
PDXK-208ENST00000461123 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
PDXK-208ENST00000461123 IFT140Q96RY7 1462 aa29.96■■■□□ 2.39
PDXK-208ENST00000461123 CYB5RLQ6IPT4 315 aa29.96■■■□□ 2.39
PDXK-208ENST00000461123 ARHGEF11O15085 1522 aa29.94■■■□□ 2.38
PDXK-208ENST00000461123 TRHP20396 242 aaPredicted RBP29.8■■■□□ 2.36
PDXK-208ENST00000461123 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
PDXK-208ENST00000461123 TOPBP1Q92547 1522 aa29.79■■■□□ 2.36
PDXK-208ENST00000461123 FBLN2P98095 1184 aa29.71■■■□□ 2.35
PDXK-208ENST00000461123 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.352e-7■■■□□ 16.9
PDXK-208ENST00000461123 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
PDXK-208ENST00000461123 EIF4G3O43432 1585 aaKnown RBP29.63■■■□□ 2.33
PDXK-208ENST00000461123 ARAP1Q96P48 1450 aa29.62■■■□□ 2.33
PDXK-208ENST00000461123 PRDM2Q13029 1718 aa29.59■■■□□ 2.33
PDXK-208ENST00000461123 DNMBPQ6XZF7 1577 aa29.56■■■□□ 2.32
PDXK-208ENST00000461123 TARBP1Q13395 1621 aaKnown RBP29.5■■■□□ 2.31
PDXK-208ENST00000461123 POLA1P09884 1462 aaPredicted RBP29.47■■■□□ 2.31
PDXK-208ENST00000461123 TDRD9Q8NDG6 1382 aaKnown RBP29.46■■■□□ 2.31
PDXK-208ENST00000461123 CHD1O14646 1710 aa29.43■■■□□ 2.3
PDXK-208ENST00000461123 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
PDXK-208ENST00000461123 SOGA1O94964 1423 aa29.41■■■□□ 2.3
PDXK-208ENST00000461123 CHMP7Q8WUX9 453 aaPredicted RBP29.38■■■□□ 2.29
PDXK-208ENST00000461123 AEBP2Q6ZN18 517 aaPredicted RBP29.36■■■□□ 2.29
PDXK-208ENST00000461123 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
PDXK-208ENST00000461123 CLASP1Q7Z460 1538 aa29.24■■■□□ 2.27
PDXK-208ENST00000461123 FGD5Q6ZNL6 1462 aa29.17■■■□□ 2.26
PDXK-208ENST00000461123 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
PDXK-208ENST00000461123 GRIN2BQ13224 1484 aa29.16■■■□□ 2.26
PDXK-208ENST00000461123 SYNJ1O43426 1573 aa29.14■■■□□ 2.26
PDXK-208ENST00000461123 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
PDXK-208ENST00000461123 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
PDXK-208ENST00000461123 GAPVD1Q14C86 1478 aa29.06■■■□□ 2.24
PDXK-208ENST00000461123 CUX1P39880 1505 aa29.05■■■□□ 2.24
PDXK-208ENST00000461123 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
PDXK-208ENST00000461123 ABCA10Q8WWZ4 1543 aa28.83■■■□□ 2.21
PDXK-208ENST00000461123 ERCC6L2Q5T890 1561 aa28.78■■■□□ 2.2
PDXK-208ENST00000461123 GRIN2AQ12879 1464 aa28.74■■■□□ 2.19
PDXK-208ENST00000461123 PBRM1Q86U86 1689 aa28.74■■■□□ 2.19
PDXK-208ENST00000461123 ABCA5Q8WWZ7 1642 aa28.71■■■□□ 2.19
PDXK-208ENST00000461123 NUP160Q12769 1436 aa28.7■■■□□ 2.19
PDXK-208ENST00000461123 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
PDXK-208ENST00000461123 WRNQ14191 1432 aaPredicted RBP eCLIP28.66■■■□□ 2.18
PDXK-208ENST00000461123 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
PDXK-208ENST00000461123 JPH4Q96JJ6 628 aa28.56■■■□□ 2.16
PDXK-208ENST00000461123 ADAMTS12P58397 1594 aa28.54■■■□□ 2.16
PDXK-208ENST00000461123 PRG4Q92954 1404 aaPredicted RBP28.53■■■□□ 2.16
PDXK-208ENST00000461123 FAM69CQ0P6D2 419 aa28.52■■■□□ 2.16
PDXK-208ENST00000461123 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
PDXK-208ENST00000461123 NPM1P06748 294 aaKnown RBP eCLIP28.46■■■□□ 2.15
PDXK-208ENST00000461123 TOP2BQ02880 1626 aa28.42■■■□□ 2.14
PDXK-208ENST00000461123 BIVM-ERCC5R4GMW8 1640 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms