RNA–Protein interactions for RNA: ENST00000461122.5

PHF20-207, Transcript of PHD finger protein 20, humanhuman

TSL 3

Gene PHF20, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-207ENST00000461122 NISCHQ9Y2I1 1504 aa45.66■■■■■ 4.9
PHF20-207ENST00000461122 ABCC9O60706 1549 aa41.26■■■■■ 4.2
PHF20-207ENST00000461122 CCDC180Q9P1Z9 1646 aa41.04■■■■■ 4.16
PHF20-207ENST00000461122 RB1CC1Q8TDY2 1594 aa39.15■■■■□ 3.86
PHF20-207ENST00000461122 DNAJC5BQ9UF47 199 aa38.91■■■■□ 3.82
PHF20-207ENST00000461122 NACADO15069 1562 aa38.83■■■■□ 3.81
PHF20-207ENST00000461122 DCAF8L2P0C7V8 631 aa38.63■■■■□ 3.77
PHF20-207ENST00000461122 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
PHF20-207ENST00000461122 UNC13AQ9UPW8 1703 aa38.32■■■■□ 3.73
PHF20-207ENST00000461122 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
PHF20-207ENST00000461122 BICRAQ9NZM4 1560 aa38.07■■■■□ 3.69
PHF20-207ENST00000461122 ZCCHC6Q5VYS8 1495 aaKnown RBP37.8■■■■□ 3.64
PHF20-207ENST00000461122 DCAF1Q9Y4B6 1507 aa37.67■■■■□ 3.62
PHF20-207ENST00000461122 SHROOM4Q9ULL8 1493 aa37.45■■■■□ 3.59
PHF20-207ENST00000461122 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
PHF20-207ENST00000461122 CC2D2AQ9P2K1 1620 aa37.25■■■■□ 3.55
PHF20-207ENST00000461122 CECR2Q9BXF3 1484 aa37.17■■■■□ 3.54
PHF20-207ENST00000461122 EIF4G1Q04637 1599 aaKnown RBP37.12■■■■□ 3.53
PHF20-207ENST00000461122 NCAPD3P42695 1498 aa35.86■■■■□ 3.33
PHF20-207ENST00000461122 DNAJC5Q9H3Z4 198 aa35.81■■■■□ 3.32
PHF20-207ENST00000461122 ATAD2BQ9ULI0 1458 aa35.74■■■■□ 3.31
PHF20-207ENST00000461122 SMARCA4P51532 1647 aa35.67■■■■□ 3.3
PHF20-207ENST00000461122 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
PHF20-207ENST00000461122 SMARCA2P51531 1590 aa35.6■■■■□ 3.29
PHF20-207ENST00000461122 CUX2O14529 1486 aa35.59■■■■□ 3.29
PHF20-207ENST00000461122 HMGXB3Q12766 1538 aa35.57■■■■□ 3.29
PHF20-207ENST00000461122 BAZ1AQ9NRL2 1556 aaPredicted RBP35.43■■■■□ 3.26
PHF20-207ENST00000461122 NESP48681 1621 aa35.41■■■■□ 3.26
PHF20-207ENST00000461122 BAZ1BQ9UIG0 1483 aaKnown RBP35.38■■■■□ 3.25
PHF20-207ENST00000461122 PEG3Q9GZU2 1588 aa35.3■■■■□ 3.24
PHF20-207ENST00000461122 MROH2BQ7Z745 1585 aa35.21■■■■□ 3.23
PHF20-207ENST00000461122 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
PHF20-207ENST00000461122 THOC2Q8NI27 1593 aaKnown RBP35.07■■■■□ 3.2
PHF20-207ENST00000461122 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
PHF20-207ENST00000461122 PDS5BQ9NTI5 1447 aa34.87■■■■□ 3.17
PHF20-207ENST00000461122 WIZO95785 1651 aa34.78■■■■□ 3.16
PHF20-207ENST00000461122 CADPSQ9ULU8 1353 aa34.76■■■■□ 3.16
PHF20-207ENST00000461122 MRC2Q9UBG0 1479 aa34.6■■■■□ 3.13
PHF20-207ENST00000461122 WDR62O43379 1518 aa34.53■■■■□ 3.12
PHF20-207ENST00000461122 CEP164Q9UPV0 1460 aa34.43■■■■□ 3.1
PHF20-207ENST00000461122 RSF1Q96T23 1441 aaPredicted RBP34.39■■■■□ 3.1
PHF20-207ENST00000461122 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
PHF20-207ENST00000461122 CFTRP13569 1480 aa34.33■■■■□ 3.09
PHF20-207ENST00000461122 TOP2AP11388 1531 aaKnown RBP34.3■■■■□ 3.08
PHF20-207ENST00000461122 TRIM41Q8WV44 630 aa34.18■■■■□ 3.06
PHF20-207ENST00000461122 URB2Q14146 1524 aaKnown RBP34.14■■■■□ 3.06
PHF20-207ENST00000461122 PRDM2Q13029 1718 aa33.98■■■■□ 3.03
PHF20-207ENST00000461122 OSCARQ8IYS5 282 aa33.94■■■■□ 3.02
PHF20-207ENST00000461122 CCDC88BA6NC98 1476 aa33.93■■■■□ 3.02
PHF20-207ENST00000461122 ZNF608Q9ULD9 1512 aaPredicted RBP33.75■■■□□ 2.99
PHF20-207ENST00000461122 IFT140Q96RY7 1462 aa33.74■■■□□ 2.99
PHF20-207ENST00000461122 TOPBP1Q92547 1522 aa33.72■■■□□ 2.99
PHF20-207ENST00000461122 ABCC8Q09428 1581 aa33.59■■■□□ 2.97
PHF20-207ENST00000461122 DNMBPQ6XZF7 1577 aa33.56■■■□□ 2.96
PHF20-207ENST00000461122 RIMBP3CA6NJZ7 1639 aa33.56■■■□□ 2.96
PHF20-207ENST00000461122 RIMBP3BA6NNM3 1639 aa33.56■■■□□ 2.96
PHF20-207ENST00000461122 RIMBP3Q9UFD9 1639 aa33.56■■■□□ 2.96
PHF20-207ENST00000461122 EIF4G3O43432 1585 aaKnown RBP33.54■■■□□ 2.96
PHF20-207ENST00000461122 TARBP1Q13395 1621 aaKnown RBP33.44■■■□□ 2.94
PHF20-207ENST00000461122 ARHGEF11O15085 1522 aa33.43■■■□□ 2.94
PHF20-207ENST00000461122 AQRO60306 1485 aaKnown RBP eCLIP33.41■■■□□ 2.942e-7■■■□□ 16.8
PHF20-207ENST00000461122 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
PHF20-207ENST00000461122 CHD1O14646 1710 aa33.33■■■□□ 2.93
PHF20-207ENST00000461122 RAD54L2Q9Y4B4 1467 aa33.27■■■□□ 2.92
PHF20-207ENST00000461122 FBLN2P98095 1184 aa33.22■■■□□ 2.91
PHF20-207ENST00000461122 SOGA1O94964 1423 aa33.19■■■□□ 2.9
PHF20-207ENST00000461122 CYB5RLQ6IPT4 315 aa33.19■■■□□ 2.9
PHF20-207ENST00000461122 TDRD9Q8NDG6 1382 aaKnown RBP33.18■■■□□ 2.9
PHF20-207ENST00000461122 FGD5Q6ZNL6 1462 aa33.13■■■□□ 2.89
PHF20-207ENST00000461122 ARAP1Q96P48 1450 aa33.1■■■□□ 2.89
PHF20-207ENST00000461122 CUX1P39880 1505 aa33.08■■■□□ 2.89
PHF20-207ENST00000461122 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
PHF20-207ENST00000461122 WDR97A6NE52 1622 aa33.03■■■□□ 2.88
PHF20-207ENST00000461122 CLASP1Q7Z460 1538 aa32.94■■■□□ 2.86
PHF20-207ENST00000461122 MAGI1Q96QZ7 1491 aaPredicted RBP32.93■■■□□ 2.86
PHF20-207ENST00000461122 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
PHF20-207ENST00000461122 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
PHF20-207ENST00000461122 SYNJ1O43426 1573 aa32.87■■■□□ 2.85
PHF20-207ENST00000461122 TRHP20396 242 aaPredicted RBP32.87■■■□□ 2.85
PHF20-207ENST00000461122 SYNJ2O15056 1496 aa32.84■■■□□ 2.85
PHF20-207ENST00000461122 PBRM1Q86U86 1689 aa32.81■■■□□ 2.84
PHF20-207ENST00000461122 GAPVD1Q14C86 1478 aa32.79■■■□□ 2.84
PHF20-207ENST00000461122 SUPT5HO00267 1087 aaKnown RBP32.75■■■□□ 2.83
PHF20-207ENST00000461122 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
PHF20-207ENST00000461122 ABCA5Q8WWZ7 1642 aa32.71■■■□□ 2.83
PHF20-207ENST00000461122 WRNQ14191 1432 aaPredicted RBP eCLIP32.55■■■□□ 2.8
PHF20-207ENST00000461122 GRIN2AQ12879 1464 aa32.51■■■□□ 2.79
PHF20-207ENST00000461122 BIVM-ERCC5R4GMW8 1640 aa32.49■■■□□ 2.79
PHF20-207ENST00000461122 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
PHF20-207ENST00000461122 ADAMTS12P58397 1594 aa32.48■■■□□ 2.79
PHF20-207ENST00000461122 ERCC6L2Q5T890 1561 aa32.45■■■□□ 2.79
PHF20-207ENST00000461122 CEP170Q5SW79 1584 aa32.43■■■□□ 2.78
PHF20-207ENST00000461122 NUP160Q12769 1436 aa32.41■■■□□ 2.78
PHF20-207ENST00000461122 FHAD1B1AJZ9 1412 aa32.36■■■□□ 2.77
PHF20-207ENST00000461122 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
PHF20-207ENST00000461122 SHROOM2Q13796 1616 aa32.29■■■□□ 2.76
PHF20-207ENST00000461122 PRG4Q92954 1404 aaPredicted RBP32.11■■■□□ 2.73
PHF20-207ENST00000461122 JPH4Q96JJ6 628 aa32.08■■■□□ 2.73
PHF20-207ENST00000461122 RUSC2Q8N2Y8 1516 aa32.02■■■□□ 2.72
PHF20-207ENST00000461122 AEBP2Q6ZN18 517 aaPredicted RBP32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms