RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
NCK1-202ENST00000460960 ABCC9O60706 1549 aa33.38■■■□□ 2.93
NCK1-202ENST00000460960 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
NCK1-202ENST00000460960 RB1CC1Q8TDY2 1594 aa31.58■■■□□ 2.65
NCK1-202ENST00000460960 DNAJC5BQ9UF47 199 aa31.53■■■□□ 2.64
NCK1-202ENST00000460960 NACADO15069 1562 aa31.25■■■□□ 2.59
NCK1-202ENST00000460960 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
NCK1-202ENST00000460960 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.56
NCK1-202ENST00000460960 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
NCK1-202ENST00000460960 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
NCK1-202ENST00000460960 MYO15BQ96JP2 1530 aa30.62■■■□□ 2.49
NCK1-202ENST00000460960 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
NCK1-202ENST00000460960 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
NCK1-202ENST00000460960 SCRIBQ14160 1630 aa30.14■■■□□ 2.41
NCK1-202ENST00000460960 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
NCK1-202ENST00000460960 CC2D2AQ9P2K1 1620 aa30.1■■■□□ 2.41
NCK1-202ENST00000460960 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
NCK1-202ENST00000460960 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
NCK1-202ENST00000460960 DNAJC5Q9H3Z4 198 aa29.17■■■□□ 2.26
NCK1-202ENST00000460960 ERCC6Q03468 1493 aa28.88■■■□□ 2.21
NCK1-202ENST00000460960 CUX2O14529 1486 aa28.83■■■□□ 2.21
NCK1-202ENST00000460960 NCAPD3P42695 1498 aa28.82■■■□□ 2.2
NCK1-202ENST00000460960 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
NCK1-202ENST00000460960 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
NCK1-202ENST00000460960 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
NCK1-202ENST00000460960 HMGXB3Q12766 1538 aa28.6■■■□□ 2.17
NCK1-202ENST00000460960 NESP48681 1621 aa28.57■■■□□ 2.16
NCK1-202ENST00000460960 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
NCK1-202ENST00000460960 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
NCK1-202ENST00000460960 THOC2Q8NI27 1593 aaKnown RBP28.3■■■□□ 2.12
NCK1-202ENST00000460960 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
NCK1-202ENST00000460960 LAMC3Q9Y6N6 1575 aa28.26■■■□□ 2.11
NCK1-202ENST00000460960 MROH2BQ7Z745 1585 aa28.22■■■□□ 2.11
NCK1-202ENST00000460960 KIF21AQ7Z4S6 1674 aa28.2■■■□□ 2.11
NCK1-202ENST00000460960 PDS5BQ9NTI5 1447 aa28.14■■■□□ 2.1
NCK1-202ENST00000460960 CADPSQ9ULU8 1353 aa27.97■■■□□ 2.07
NCK1-202ENST00000460960 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
NCK1-202ENST00000460960 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
NCK1-202ENST00000460960 WIZO95785 1651 aa27.91■■■□□ 2.06
NCK1-202ENST00000460960 WDR62O43379 1518 aa27.83■■■□□ 2.05
NCK1-202ENST00000460960 CEP164Q9UPV0 1460 aa27.76■■■□□ 2.04
NCK1-202ENST00000460960 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.02
NCK1-202ENST00000460960 CFTRP13569 1480 aa27.57■■■□□ 2
NCK1-202ENST00000460960 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
NCK1-202ENST00000460960 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
NCK1-202ENST00000460960 TOP2AP11388 1531 aaKnown RBP27.5■■□□□ 1.99
NCK1-202ENST00000460960 URB2Q14146 1524 aaKnown RBP27.47■■□□□ 1.99
NCK1-202ENST00000460960 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
NCK1-202ENST00000460960 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
NCK1-202ENST00000460960 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
NCK1-202ENST00000460960 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
NCK1-202ENST00000460960 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
NCK1-202ENST00000460960 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
NCK1-202ENST00000460960 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
NCK1-202ENST00000460960 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
NCK1-202ENST00000460960 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
NCK1-202ENST00000460960 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
NCK1-202ENST00000460960 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
NCK1-202ENST00000460960 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
NCK1-202ENST00000460960 CHD1O14646 1710 aa26.93■■□□□ 1.9
NCK1-202ENST00000460960 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
NCK1-202ENST00000460960 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.9
NCK1-202ENST00000460960 FBLN2P98095 1184 aa26.91■■□□□ 1.9
NCK1-202ENST00000460960 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
NCK1-202ENST00000460960 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
NCK1-202ENST00000460960 TRHP20396 242 aaPredicted RBP26.8■■□□□ 1.88
NCK1-202ENST00000460960 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
NCK1-202ENST00000460960 ARAP1Q96P48 1450 aa26.76■■□□□ 1.87
NCK1-202ENST00000460960 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
NCK1-202ENST00000460960 SOGA1O94964 1423 aa26.71■■□□□ 1.87
NCK1-202ENST00000460960 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
NCK1-202ENST00000460960 FGD5Q6ZNL6 1462 aa26.63■■□□□ 1.85
NCK1-202ENST00000460960 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
NCK1-202ENST00000460960 SYNJ1O43426 1573 aa26.55■■□□□ 1.84
NCK1-202ENST00000460960 WDR97A6NE52 1622 aa26.55■■□□□ 1.84
NCK1-202ENST00000460960 CUX1P39880 1505 aa26.55■■□□□ 1.84
NCK1-202ENST00000460960 CLASP1Q7Z460 1538 aa26.54■■□□□ 1.84
NCK1-202ENST00000460960 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
NCK1-202ENST00000460960 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
NCK1-202ENST00000460960 SYNJ2O15056 1496 aa26.45■■□□□ 1.82
NCK1-202ENST00000460960 PBRM1Q86U86 1689 aa26.42■■□□□ 1.82
NCK1-202ENST00000460960 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
NCK1-202ENST00000460960 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
NCK1-202ENST00000460960 ABCA10Q8WWZ4 1543 aa26.27■■□□□ 1.8
NCK1-202ENST00000460960 ABCA5Q8WWZ7 1642 aa26.27■■□□□ 1.8
NCK1-202ENST00000460960 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
NCK1-202ENST00000460960 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
NCK1-202ENST00000460960 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
NCK1-202ENST00000460960 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
NCK1-202ENST00000460960 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
NCK1-202ENST00000460960 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
NCK1-202ENST00000460960 NUP160Q12769 1436 aa26.05■■□□□ 1.76
NCK1-202ENST00000460960 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
NCK1-202ENST00000460960 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
NCK1-202ENST00000460960 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
NCK1-202ENST00000460960 SHROOM2Q13796 1616 aa25.97■■□□□ 1.75
NCK1-202ENST00000460960 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
NCK1-202ENST00000460960 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
NCK1-202ENST00000460960 KIF13AQ9H1H9 1805 aa25.84■■□□□ 1.73
NCK1-202ENST00000460960 JPH4Q96JJ6 628 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms