RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
VAMP7-203ENST00000460621 ABCC9O60706 1549 aa24.91■■□□□ 1.58
VAMP7-203ENST00000460621 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
VAMP7-203ENST00000460621 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
VAMP7-203ENST00000460621 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
VAMP7-203ENST00000460621 NACADO15069 1562 aa23.42■■□□□ 1.34
VAMP7-203ENST00000460621 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
VAMP7-203ENST00000460621 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
VAMP7-203ENST00000460621 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
VAMP7-203ENST00000460621 MYO15BQ96JP2 1530 aa23.08■■□□□ 1.29
VAMP7-203ENST00000460621 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
VAMP7-203ENST00000460621 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
VAMP7-203ENST00000460621 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
VAMP7-203ENST00000460621 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
VAMP7-203ENST00000460621 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
VAMP7-203ENST00000460621 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
VAMP7-203ENST00000460621 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
VAMP7-203ENST00000460621 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
VAMP7-203ENST00000460621 NCAPD3P42695 1498 aa21.7■■□□□ 1.06
VAMP7-203ENST00000460621 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
VAMP7-203ENST00000460621 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
VAMP7-203ENST00000460621 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
VAMP7-203ENST00000460621 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
VAMP7-203ENST00000460621 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
VAMP7-203ENST00000460621 NESP48681 1621 aa21.44■■□□□ 1.02
VAMP7-203ENST00000460621 ERCC6Q03468 1493 aa21.4■■□□□ 1.02
VAMP7-203ENST00000460621 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
VAMP7-203ENST00000460621 CUX2O14529 1486 aa21.39■■□□□ 1.02
VAMP7-203ENST00000460621 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
VAMP7-203ENST00000460621 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
VAMP7-203ENST00000460621 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
VAMP7-203ENST00000460621 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
VAMP7-203ENST00000460621 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
VAMP7-203ENST00000460621 WIZO95785 1651 aa21.07■□□□□ 0.96
VAMP7-203ENST00000460621 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
VAMP7-203ENST00000460621 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
VAMP7-203ENST00000460621 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
VAMP7-203ENST00000460621 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
VAMP7-203ENST00000460621 MRC2Q9UBG0 1479 aa20.87■□□□□ 0.93
VAMP7-203ENST00000460621 WDR62O43379 1518 aa20.83■□□□□ 0.92
VAMP7-203ENST00000460621 CFTRP13569 1480 aa20.78■□□□□ 0.92
VAMP7-203ENST00000460621 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
VAMP7-203ENST00000460621 TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
VAMP7-203ENST00000460621 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
VAMP7-203ENST00000460621 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
VAMP7-203ENST00000460621 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
VAMP7-203ENST00000460621 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
VAMP7-203ENST00000460621 OSCARQ8IYS5 282 aa20.46■□□□□ 0.87
VAMP7-203ENST00000460621 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
VAMP7-203ENST00000460621 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
VAMP7-203ENST00000460621 TOPBP1Q92547 1522 aa20.39■□□□□ 0.85
VAMP7-203ENST00000460621 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
VAMP7-203ENST00000460621 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
VAMP7-203ENST00000460621 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
VAMP7-203ENST00000460621 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.832e-6■■■■■ 26.9
VAMP7-203ENST00000460621 TARBP1Q13395 1621 aaKnown RBP20.22■□□□□ 0.83
VAMP7-203ENST00000460621 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
VAMP7-203ENST00000460621 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
VAMP7-203ENST00000460621 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
VAMP7-203ENST00000460621 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
VAMP7-203ENST00000460621 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
VAMP7-203ENST00000460621 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
VAMP7-203ENST00000460621 ARHGEF11O15085 1522 aa20.14■□□□□ 0.81
VAMP7-203ENST00000460621 TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
VAMP7-203ENST00000460621 SOGA1O94964 1423 aa20.09■□□□□ 0.81
VAMP7-203ENST00000460621 CHD1O14646 1710 aa20.07■□□□□ 0.8
VAMP7-203ENST00000460621 FBLN2P98095 1184 aa20.05■□□□□ 0.8
VAMP7-203ENST00000460621 CUX1P39880 1505 aa20.05■□□□□ 0.8
VAMP7-203ENST00000460621 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
VAMP7-203ENST00000460621 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
VAMP7-203ENST00000460621 ARAP1Q96P48 1450 aa19.98■□□□□ 0.79
VAMP7-203ENST00000460621 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
VAMP7-203ENST00000460621 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
VAMP7-203ENST00000460621 CLASP1Q7Z460 1538 aa19.88■□□□□ 0.77
VAMP7-203ENST00000460621 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
VAMP7-203ENST00000460621 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
VAMP7-203ENST00000460621 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
VAMP7-203ENST00000460621 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
VAMP7-203ENST00000460621 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
VAMP7-203ENST00000460621 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
VAMP7-203ENST00000460621 ABCA10Q8WWZ4 1543 aa19.8■□□□□ 0.76
VAMP7-203ENST00000460621 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
VAMP7-203ENST00000460621 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
VAMP7-203ENST00000460621 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
VAMP7-203ENST00000460621 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
VAMP7-203ENST00000460621 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
VAMP7-203ENST00000460621 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
VAMP7-203ENST00000460621 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
VAMP7-203ENST00000460621 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
VAMP7-203ENST00000460621 BIVM-ERCC5R4GMW8 1640 aa19.64■□□□□ 0.73
VAMP7-203ENST00000460621 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
VAMP7-203ENST00000460621 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
VAMP7-203ENST00000460621 NUP160Q12769 1436 aa19.6■□□□□ 0.73
VAMP7-203ENST00000460621 FHAD1B1AJZ9 1412 aa19.56■□□□□ 0.72
VAMP7-203ENST00000460621 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
VAMP7-203ENST00000460621 SHROOM2Q13796 1616 aa19.5■□□□□ 0.71
VAMP7-203ENST00000460621 JPH4Q96JJ6 628 aa19.42■□□□□ 0.7
VAMP7-203ENST00000460621 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
VAMP7-203ENST00000460621 IGF1RP08069 1367 aa19.37■□□□□ 0.69
VAMP7-203ENST00000460621 RUSC2Q8N2Y8 1516 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms