RNA–Protein interactions for RNA: ENST00000460589.5

RPL3-208, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 630 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-208ENST00000460589 NISCHQ9Y2I1 1504 aa43.42■■■■■ 4.54
RPL3-208ENST00000460589 ABCC9O60706 1549 aa39.29■■■■□ 3.88
RPL3-208ENST00000460589 CCDC180Q9P1Z9 1646 aa39.03■■■■□ 3.84
RPL3-208ENST00000460589 RB1CC1Q8TDY2 1594 aa37.25■■■■□ 3.55
RPL3-208ENST00000460589 DNAJC5BQ9UF47 199 aa37.14■■■■□ 3.54
RPL3-208ENST00000460589 NACADO15069 1562 aa36.94■■■■□ 3.5
RPL3-208ENST00000460589 DCAF8L2P0C7V8 631 aa36.59■■■■□ 3.45
RPL3-208ENST00000460589 PABPN1Q86U42 306 aaKnown RBP eCLIP36.52■■■■□ 3.44
RPL3-208ENST00000460589 UNC13AQ9UPW8 1703 aa36.47■■■■□ 3.43
RPL3-208ENST00000460589 MYO15BQ96JP2 1530 aa36.39■■■■□ 3.42
RPL3-208ENST00000460589 BICRAQ9NZM4 1560 aa36.3■■■■□ 3.4
RPL3-208ENST00000460589 ZCCHC6Q5VYS8 1495 aaKnown RBP35.97■■■■□ 3.35
RPL3-208ENST00000460589 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
RPL3-208ENST00000460589 SHROOM4Q9ULL8 1493 aa35.68■■■■□ 3.3
RPL3-208ENST00000460589 SCRIBQ14160 1630 aa35.58■■■■□ 3.29
RPL3-208ENST00000460589 CC2D2AQ9P2K1 1620 aa35.5■■■■□ 3.27
RPL3-208ENST00000460589 CECR2Q9BXF3 1484 aa35.4■■■■□ 3.26
RPL3-208ENST00000460589 EIF4G1Q04637 1599 aaKnown RBP35.37■■■■□ 3.25
RPL3-208ENST00000460589 DNAJC5Q9H3Z4 198 aa34.17■■■■□ 3.06
RPL3-208ENST00000460589 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
RPL3-208ENST00000460589 ATAD2BQ9ULI0 1458 aa34.02■■■■□ 3.04
RPL3-208ENST00000460589 CUX2O14529 1486 aa33.94■■■■□ 3.02
RPL3-208ENST00000460589 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
RPL3-208ENST00000460589 HMGXB3Q12766 1538 aa33.87■■■■□ 3.01
RPL3-208ENST00000460589 ERCC6Q03468 1493 aa33.86■■■■□ 3.01
RPL3-208ENST00000460589 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
RPL3-208ENST00000460589 NESP48681 1621 aa33.73■■■□□ 2.99
RPL3-208ENST00000460589 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
RPL3-208ENST00000460589 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
RPL3-208ENST00000460589 PEG3Q9GZU2 1588 aa33.62■■■□□ 2.97
RPL3-208ENST00000460589 MROH2BQ7Z745 1585 aa33.48■■■□□ 2.95
RPL3-208ENST00000460589 THOC2Q8NI27 1593 aaKnown RBP33.45■■■□□ 2.95
RPL3-208ENST00000460589 LAMC3Q9Y6N6 1575 aa33.38■■■□□ 2.93
RPL3-208ENST00000460589 KIF21AQ7Z4S6 1674 aa33.25■■■□□ 2.91
RPL3-208ENST00000460589 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
RPL3-208ENST00000460589 CADPSQ9ULU8 1353 aa33.07■■■□□ 2.88
RPL3-208ENST00000460589 WIZO95785 1651 aa33.05■■■□□ 2.88
RPL3-208ENST00000460589 MRC2Q9UBG0 1479 aa32.94■■■□□ 2.86
RPL3-208ENST00000460589 WDR62O43379 1518 aa32.91■■■□□ 2.86
RPL3-208ENST00000460589 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
RPL3-208ENST00000460589 FANCD2Q9BXW9 1451 aa32.71■■■□□ 2.83
RPL3-208ENST00000460589 RSF1Q96T23 1441 aaPredicted RBP32.68■■■□□ 2.82
RPL3-208ENST00000460589 CFTRP13569 1480 aa32.67■■■□□ 2.82
RPL3-208ENST00000460589 TOP2AP11388 1531 aaKnown RBP32.6■■■□□ 2.81
RPL3-208ENST00000460589 TRIM41Q8WV44 630 aa32.53■■■□□ 2.8
RPL3-208ENST00000460589 URB2Q14146 1524 aaKnown RBP32.51■■■□□ 2.79
RPL3-208ENST00000460589 PRDM2Q13029 1718 aa32.28■■■□□ 2.76
RPL3-208ENST00000460589 OSCARQ8IYS5 282 aa32.26■■■□□ 2.75
RPL3-208ENST00000460589 CCDC88BA6NC98 1476 aa32.24■■■□□ 2.75
RPL3-208ENST00000460589 ZNF608Q9ULD9 1512 aaPredicted RBP32.15■■■□□ 2.74
RPL3-208ENST00000460589 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
RPL3-208ENST00000460589 TOPBP1Q92547 1522 aa32.08■■■□□ 2.73
RPL3-208ENST00000460589 RIMBP3CA6NJZ7 1639 aa31.99■■■□□ 2.71
RPL3-208ENST00000460589 RIMBP3BA6NNM3 1639 aa31.99■■■□□ 2.71
RPL3-208ENST00000460589 RIMBP3Q9UFD9 1639 aa31.99■■■□□ 2.71
RPL3-208ENST00000460589 EIF4G3O43432 1585 aaKnown RBP31.94■■■□□ 2.7
RPL3-208ENST00000460589 DNMBPQ6XZF7 1577 aa31.93■■■□□ 2.7
RPL3-208ENST00000460589 ABCC8Q09428 1581 aa31.9■■■□□ 2.7
RPL3-208ENST00000460589 ARHGEF11O15085 1522 aa31.86■■■□□ 2.69
RPL3-208ENST00000460589 TARBP1Q13395 1621 aaKnown RBP31.85■■■□□ 2.69
RPL3-208ENST00000460589 AQRO60306 1485 aaKnown RBP eCLIP31.78■■■□□ 2.681e-8■■■■■ 27.7
RPL3-208ENST00000460589 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
RPL3-208ENST00000460589 CHD1O14646 1710 aa31.72■■■□□ 2.67
RPL3-208ENST00000460589 RAD54L2Q9Y4B4 1467 aa31.64■■■□□ 2.66
RPL3-208ENST00000460589 ARAP1Q96P48 1450 aa31.56■■■□□ 2.64
RPL3-208ENST00000460589 CYB5RLQ6IPT4 315 aa31.55■■■□□ 2.64
RPL3-208ENST00000460589 SOGA1O94964 1423 aa31.53■■■□□ 2.64
RPL3-208ENST00000460589 TDRD9Q8NDG6 1382 aaKnown RBP31.53■■■□□ 2.64
RPL3-208ENST00000460589 FBLN2P98095 1184 aa31.5■■■□□ 2.63
RPL3-208ENST00000460589 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
RPL3-208ENST00000460589 CUX1P39880 1505 aa31.47■■■□□ 2.63
RPL3-208ENST00000460589 SNAPC4Q5SXM2 1469 aa31.46■■■□□ 2.63
RPL3-208ENST00000460589 WDR97A6NE52 1622 aa31.43■■■□□ 2.62
RPL3-208ENST00000460589 CLASP1Q7Z460 1538 aa31.4■■■□□ 2.62
RPL3-208ENST00000460589 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
RPL3-208ENST00000460589 GRIN2BQ13224 1484 aa31.3■■■□□ 2.6
RPL3-208ENST00000460589 SYNJ1O43426 1573 aa31.26■■■□□ 2.59
RPL3-208ENST00000460589 SYNJ2O15056 1496 aa31.24■■■□□ 2.59
RPL3-208ENST00000460589 CHMP7Q8WUX9 453 aaPredicted RBP31.23■■■□□ 2.59
RPL3-208ENST00000460589 TRHP20396 242 aaPredicted RBP31.21■■■□□ 2.59
RPL3-208ENST00000460589 PBRM1Q86U86 1689 aa31.19■■■□□ 2.58
RPL3-208ENST00000460589 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
RPL3-208ENST00000460589 ABCA5Q8WWZ7 1642 aa31.14■■■□□ 2.58
RPL3-208ENST00000460589 ABCA10Q8WWZ4 1543 aa31.13■■■□□ 2.57
RPL3-208ENST00000460589 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
RPL3-208ENST00000460589 GRIN2AQ12879 1464 aa30.93■■■□□ 2.54
RPL3-208ENST00000460589 ERCC6L2Q5T890 1561 aa30.92■■■□□ 2.54
RPL3-208ENST00000460589 ADAMTS12P58397 1594 aa30.92■■■□□ 2.54
RPL3-208ENST00000460589 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.545e-6■□□□□ 8.4
RPL3-208ENST00000460589 BIVM-ERCC5R4GMW8 1640 aa30.88■■■□□ 2.53
RPL3-208ENST00000460589 CEP170Q5SW79 1584 aa30.87■■■□□ 2.53
RPL3-208ENST00000460589 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
RPL3-208ENST00000460589 NUP160Q12769 1436 aa30.86■■■□□ 2.53
RPL3-208ENST00000460589 SHROOM2Q13796 1616 aa30.76■■■□□ 2.51
RPL3-208ENST00000460589 FHAD1B1AJZ9 1412 aa30.75■■■□□ 2.51
RPL3-208ENST00000460589 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
RPL3-208ENST00000460589 PRG4Q92954 1404 aaPredicted RBP30.53■■■□□ 2.48
RPL3-208ENST00000460589 RUSC2Q8N2Y8 1516 aa30.5■■■□□ 2.47
RPL3-208ENST00000460589 JPH4Q96JJ6 628 aa30.44■■■□□ 2.46
RPL3-208ENST00000460589 KIF13AQ9H1H9 1805 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms