RNA–Protein interactions for RNA: ENST00000460581.6

COCH-203, Transcript of cochlin, humanhuman

TSL 2 BASIC

Gene COCH, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-203ENST00000460581 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
COCH-203ENST00000460581 CCDC180Q9P1Z9 1646 aa27.18■■□□□ 1.94
COCH-203ENST00000460581 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
COCH-203ENST00000460581 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
COCH-203ENST00000460581 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
COCH-203ENST00000460581 ZCCHC6Q5VYS8 1495 aaKnown RBP26.34■■□□□ 1.81
COCH-203ENST00000460581 ABCC9O60706 1549 aa26.28■■□□□ 1.8
COCH-203ENST00000460581 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
COCH-203ENST00000460581 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
COCH-203ENST00000460581 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
COCH-203ENST00000460581 NACADO15069 1562 aa25.45■■□□□ 1.66
COCH-203ENST00000460581 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
COCH-203ENST00000460581 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
COCH-203ENST00000460581 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
COCH-203ENST00000460581 SCRIBQ14160 1630 aa25.27■■□□□ 1.64
COCH-203ENST00000460581 HRCP23327 699 aa25.2■■□□□ 1.62
COCH-203ENST00000460581 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
COCH-203ENST00000460581 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
COCH-203ENST00000460581 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
COCH-203ENST00000460581 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
COCH-203ENST00000460581 EHMT2Q96KQ7 1210 aa24.72■■□□□ 1.55
COCH-203ENST00000460581 FAM9AQ8IZU1 332 aaPredicted RBP24.71■■□□□ 1.55
COCH-203ENST00000460581 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
COCH-203ENST00000460581 BICRAQ9NZM4 1560 aa24.61■■□□□ 1.53
COCH-203ENST00000460581 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
COCH-203ENST00000460581 TRIM26Q12899 539 aaPredicted RBP24.52■■□□□ 1.52
COCH-203ENST00000460581 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
COCH-203ENST00000460581 WIZO95785 1651 aa24.24■■□□□ 1.47
COCH-203ENST00000460581 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.45
COCH-203ENST00000460581 SMARCA4P51532 1647 aa24.07■■□□□ 1.44
COCH-203ENST00000460581 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
COCH-203ENST00000460581 TTBK1Q5TCY1 1321 aaPredicted RBP23.9■■□□□ 1.42
COCH-203ENST00000460581 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
COCH-203ENST00000460581 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
COCH-203ENST00000460581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.8■■□□□ 1.4
COCH-203ENST00000460581 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
COCH-203ENST00000460581 CCDC88BA6NC98 1476 aa23.79■■□□□ 1.4
COCH-203ENST00000460581 SOGA1O94964 1423 aa23.68■■□□□ 1.38
COCH-203ENST00000460581 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
COCH-203ENST00000460581 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
COCH-203ENST00000460581 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
COCH-203ENST00000460581 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
COCH-203ENST00000460581 CC2D2AQ9P2K1 1620 aa23.63■■□□□ 1.37
COCH-203ENST00000460581 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
COCH-203ENST00000460581 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
COCH-203ENST00000460581 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
COCH-203ENST00000460581 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
COCH-203ENST00000460581 UBTFP17480 764 aaKnown RBP23.49■■□□□ 1.35
COCH-203ENST00000460581 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
COCH-203ENST00000460581 SCAF1Q9H7N4 1312 aaKnown RBP23.45■■□□□ 1.34
COCH-203ENST00000460581 CSRNP3Q8WYN3 585 aa23.45■■□□□ 1.34
COCH-203ENST00000460581 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
COCH-203ENST00000460581 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
COCH-203ENST00000460581 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
COCH-203ENST00000460581 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
COCH-203ENST00000460581 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
COCH-203ENST00000460581 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
COCH-203ENST00000460581 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
COCH-203ENST00000460581 HNRNPUL2Q1KMD3 747 aaKnown RBP23.16■■□□□ 1.3
COCH-203ENST00000460581 NEUROD1Q13562 356 aa23.15■■□□□ 1.3
COCH-203ENST00000460581 EEA1Q15075 1411 aa23.15■■□□□ 1.3
COCH-203ENST00000460581 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
COCH-203ENST00000460581 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
COCH-203ENST00000460581 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
COCH-203ENST00000460581 CLIP1P30622 1438 aa23.02■■□□□ 1.28
COCH-203ENST00000460581 NESP48681 1621 aa23■■□□□ 1.27
COCH-203ENST00000460581 CFTRP13569 1480 aa23■■□□□ 1.27
COCH-203ENST00000460581 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
COCH-203ENST00000460581 KIF21BO75037 1637 aa22.9■■□□□ 1.26
COCH-203ENST00000460581 ZNF316A6NFI3 1004 aaPredicted RBP22.89■■□□□ 1.26
COCH-203ENST00000460581 GTF3C3Q9Y5Q9 886 aa22.89■■□□□ 1.25
COCH-203ENST00000460581 VPS8Q8N3P4 1428 aa22.87■■□□□ 1.25
COCH-203ENST00000460581 YTHDC1Q96MU7 727 aaKnown RBP22.86■■□□□ 1.25
COCH-203ENST00000460581 APLP2Q06481 763 aa22.83■■□□□ 1.25
COCH-203ENST00000460581 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
COCH-203ENST00000460581 MIER1Q8N108 512 aa22.76■■□□□ 1.23
COCH-203ENST00000460581 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
COCH-203ENST00000460581 LAMC3Q9Y6N6 1575 aa22.74■■□□□ 1.23
COCH-203ENST00000460581 TOP2BQ02880 1626 aa22.74■■□□□ 1.23
COCH-203ENST00000460581 CENPBP07199 599 aaPredicted RBP22.73■■□□□ 1.23
COCH-203ENST00000460581 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
COCH-203ENST00000460581 PDS5BQ9NTI5 1447 aa22.67■■□□□ 1.22
COCH-203ENST00000460581 CUX1P39880 1505 aa22.67■■□□□ 1.22
COCH-203ENST00000460581 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
COCH-203ENST00000460581 PRXQ9BXM0 1461 aa22.63■■□□□ 1.21
COCH-203ENST00000460581 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
COCH-203ENST00000460581 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
COCH-203ENST00000460581 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
COCH-203ENST00000460581 ITGAEP38570 1179 aa22.56■■□□□ 1.2
COCH-203ENST00000460581 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
COCH-203ENST00000460581 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
COCH-203ENST00000460581 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
COCH-203ENST00000460581 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
COCH-203ENST00000460581 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
COCH-203ENST00000460581 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
COCH-203ENST00000460581 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
COCH-203ENST00000460581 DNMBPQ6XZF7 1577 aa22.43■■□□□ 1.18
COCH-203ENST00000460581 ARHGAP35Q9NRY4 1499 aa22.43■■□□□ 1.18
COCH-203ENST00000460581 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
COCH-203ENST00000460581 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms