RNA–Protein interactions for RNA: ENST00000460424.5

ACAA1-212, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 538 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-212ENST00000460424 NISCHQ9Y2I1 1504 aa56.53■■■■■ 6.64
ACAA1-212ENST00000460424 CCDC180Q9P1Z9 1646 aa50.49■■■■■ 5.67
ACAA1-212ENST00000460424 ABCC9O60706 1549 aa49.47■■■■■ 5.51
ACAA1-212ENST00000460424 RB1CC1Q8TDY2 1594 aa47.55■■■■■ 5.2
ACAA1-212ENST00000460424 NACADO15069 1562 aa47.41■■■■■ 5.18
ACAA1-212ENST00000460424 DCAF8L2P0C7V8 631 aa47.23■■■■■ 5.15
ACAA1-212ENST00000460424 ZCCHC6Q5VYS8 1495 aaKnown RBP47.08■■■■■ 5.13
ACAA1-212ENST00000460424 MYO15BQ96JP2 1530 aa47.03■■■■■ 5.12
ACAA1-212ENST00000460424 DCAF1Q9Y4B6 1507 aa46.77■■■■■ 5.08
ACAA1-212ENST00000460424 UNC13AQ9UPW8 1703 aa46.61■■■■■ 5.05
ACAA1-212ENST00000460424 BICRAQ9NZM4 1560 aa46.1■■■■■ 4.97
ACAA1-212ENST00000460424 PABPN1Q86U42 306 aaKnown RBP eCLIP46.1■■■■■ 4.97
ACAA1-212ENST00000460424 SCRIBQ14160 1630 aa46.03■■■■■ 4.96
ACAA1-212ENST00000460424 SHROOM4Q9ULL8 1493 aa45.59■■■■■ 4.89
ACAA1-212ENST00000460424 DNAJC5BQ9UF47 199 aa45.43■■■■■ 4.86
ACAA1-212ENST00000460424 EIF4G1Q04637 1599 aaKnown RBP44.91■■■■■ 4.78
ACAA1-212ENST00000460424 CC2D2AQ9P2K1 1620 aa44.79■■■■■ 4.76
ACAA1-212ENST00000460424 CECR2Q9BXF3 1484 aa44.46■■■■■ 4.71
ACAA1-212ENST00000460424 SMARCA4P51532 1647 aa43.99■■■■■ 4.63
ACAA1-212ENST00000460424 BAZ1AQ9NRL2 1556 aaPredicted RBP43.88■■■■■ 4.61
ACAA1-212ENST00000460424 SMARCA2P51531 1590 aa43.7■■■■■ 4.59
ACAA1-212ENST00000460424 ATAD2BQ9ULI0 1458 aa43.7■■■■■ 4.59
ACAA1-212ENST00000460424 NCAPD3P42695 1498 aa43.68■■■■■ 4.58
ACAA1-212ENST00000460424 MROH2BQ7Z745 1585 aa43.58■■■■■ 4.57
ACAA1-212ENST00000460424 HMGXB3Q12766 1538 aa43.54■■■■■ 4.56
ACAA1-212ENST00000460424 PEG3Q9GZU2 1588 aa43.52■■■■■ 4.56
ACAA1-212ENST00000460424 BAZ1BQ9UIG0 1483 aaKnown RBP43.38■■■■■ 4.53
ACAA1-212ENST00000460424 WIZO95785 1651 aa43.17■■■■■ 4.5
ACAA1-212ENST00000460424 RSF1Q96T23 1441 aaPredicted RBP42.95■■■■■ 4.47
ACAA1-212ENST00000460424 NESP48681 1621 aa42.75■■■■■ 4.43
ACAA1-212ENST00000460424 ERCC6Q03468 1493 aa42.68■■■■■ 4.42
ACAA1-212ENST00000460424 TOP2AP11388 1531 aaKnown RBP42.67■■■■■ 4.42
ACAA1-212ENST00000460424 LAMC3Q9Y6N6 1575 aa42.67■■■■■ 4.42
ACAA1-212ENST00000460424 CADPSQ9ULU8 1353 aa42.39■■■■■ 4.38
ACAA1-212ENST00000460424 KIF21AQ7Z4S6 1674 aa42.38■■■■■ 4.37
ACAA1-212ENST00000460424 PDS5BQ9NTI5 1447 aa42.29■■■■■ 4.36
ACAA1-212ENST00000460424 CUX2O14529 1486 aa42.28■■■■■ 4.36
ACAA1-212ENST00000460424 THOC2Q8NI27 1593 aaKnown RBP42.23■■■■■ 4.35
ACAA1-212ENST00000460424 CFTRP13569 1480 aa42.12■■■■■ 4.33
ACAA1-212ENST00000460424 CCDC88BA6NC98 1476 aa42.1■■■■■ 4.33
ACAA1-212ENST00000460424 PRDM2Q13029 1718 aa42.04■■■■■ 4.32
ACAA1-212ENST00000460424 FANCD2Q9BXW9 1451 aa41.96■■■■■ 4.31
ACAA1-212ENST00000460424 CEP164Q9UPV0 1460 aa41.96■■■■■ 4.31
ACAA1-212ENST00000460424 MRC2Q9UBG0 1479 aa41.92■■■■■ 4.3
ACAA1-212ENST00000460424 WDR62O43379 1518 aa41.82■■■■■ 4.29
ACAA1-212ENST00000460424 SUPT5HO00267 1087 aaKnown RBP41.69■■■■■ 4.26
ACAA1-212ENST00000460424 URB2Q14146 1524 aaKnown RBP41.56■■■■■ 4.24
ACAA1-212ENST00000460424 TOPBP1Q92547 1522 aa41.28■■■■■ 4.2
ACAA1-212ENST00000460424 DNMBPQ6XZF7 1577 aa41.26■■■■■ 4.2
ACAA1-212ENST00000460424 ABCC8Q09428 1581 aa41.25■■■■■ 4.19
ACAA1-212ENST00000460424 DNAJC5Q9H3Z4 198 aa41.07■■■■■ 4.17
ACAA1-212ENST00000460424 IFT140Q96RY7 1462 aa41.05■■■■■ 4.16
ACAA1-212ENST00000460424 POLA1P09884 1462 aaPredicted RBP40.91■■■■■ 4.14
ACAA1-212ENST00000460424 CUX1P39880 1505 aa40.9■■■■■ 4.14
ACAA1-212ENST00000460424 TARBP1Q13395 1621 aaKnown RBP40.89■■■■■ 4.14
ACAA1-212ENST00000460424 ZNF608Q9ULD9 1512 aaPredicted RBP40.88■■■■■ 4.14
ACAA1-212ENST00000460424 EIF4G3O43432 1585 aaKnown RBP40.82■■■■■ 4.13
ACAA1-212ENST00000460424 FGD5Q6ZNL6 1462 aa40.8■■■■■ 4.12
ACAA1-212ENST00000460424 RAD54L2Q9Y4B4 1467 aa40.71■■■■■ 4.11
ACAA1-212ENST00000460424 SOGA1O94964 1423 aa40.68■■■■■ 4.1
ACAA1-212ENST00000460424 AQRO60306 1485 aaKnown RBP eCLIP40.6■■■■■ 4.091e-6■■■■■ 38.1
ACAA1-212ENST00000460424 WDR97A6NE52 1622 aa40.6■■■■■ 4.09
ACAA1-212ENST00000460424 BIVM-ERCC5R4GMW8 1640 aa40.59■■■■■ 4.09
ACAA1-212ENST00000460424 TOP2BQ02880 1626 aa40.54■■■■■ 4.08
ACAA1-212ENST00000460424 WRNQ14191 1432 aaPredicted RBP eCLIP40.54■■■■■ 4.08
ACAA1-212ENST00000460424 SYNJ1O43426 1573 aa40.52■■■■■ 4.08
ACAA1-212ENST00000460424 TDRD9Q8NDG6 1382 aaKnown RBP40.48■■■■■ 4.07
ACAA1-212ENST00000460424 CHD1O14646 1710 aa40.4■■■■■ 4.06
ACAA1-212ENST00000460424 OSCARQ8IYS5 282 aa40.38■■■■■ 4.05
ACAA1-212ENST00000460424 ABCA10Q8WWZ4 1543 aa40.37■■■■■ 4.05
ACAA1-212ENST00000460424 PBRM1Q86U86 1689 aa40.36■■■■■ 4.05
ACAA1-212ENST00000460424 ABCA5Q8WWZ7 1642 aa40.31■■■■■ 4.04
ACAA1-212ENST00000460424 GRIN2BQ13224 1484 aa40.28■■■■■ 4.04
ACAA1-212ENST00000460424 SNAPC4Q5SXM2 1469 aa40.28■■■■■ 4.04
ACAA1-212ENST00000460424 GAPVD1Q14C86 1478 aa40.26■■■■■ 4.03
ACAA1-212ENST00000460424 MAGI1Q96QZ7 1491 aaPredicted RBP40.21■■■■■ 4.03
ACAA1-212ENST00000460424 FBLN2P98095 1184 aa40.13■■■■■ 4.01
ACAA1-212ENST00000460424 SYNJ2O15056 1496 aa40.05■■■■■ 4
ACAA1-212ENST00000460424 CHMP7Q8WUX9 453 aaPredicted RBP39.98■■■■□ 3.99
ACAA1-212ENST00000460424 ADAMTS12P58397 1594 aa39.95■■■■□ 3.99
ACAA1-212ENST00000460424 RIMBP3CA6NJZ7 1639 aa39.94■■■■□ 3.98
ACAA1-212ENST00000460424 RIMBP3BA6NNM3 1639 aa39.94■■■■□ 3.98
ACAA1-212ENST00000460424 RIMBP3Q9UFD9 1639 aa39.94■■■■□ 3.98
ACAA1-212ENST00000460424 ERICH3Q5RHP9 1530 aa39.91■■■■□ 3.98
ACAA1-212ENST00000460424 ARHGEF11O15085 1522 aa39.86■■■■□ 3.97
ACAA1-212ENST00000460424 CLASP1Q7Z460 1538 aa39.86■■■■□ 3.97
ACAA1-212ENST00000460424 GRIN2AQ12879 1464 aa39.78■■■■□ 3.96
ACAA1-212ENST00000460424 FHAD1B1AJZ9 1412 aa39.77■■■■□ 3.96
ACAA1-212ENST00000460424 TRIM41Q8WV44 630 aa39.72■■■■□ 3.95
ACAA1-212ENST00000460424 KIF27Q86VH2 1401 aa39.7■■■■□ 3.95
ACAA1-212ENST00000460424 CEP170Q5SW79 1584 aa39.63■■■■□ 3.94
ACAA1-212ENST00000460424 CUL7Q14999 1698 aa39.6■■■■□ 3.93
ACAA1-212ENST00000460424 NUP160Q12769 1436 aa39.58■■■■□ 3.93
ACAA1-212ENST00000460424 ARAP1Q96P48 1450 aa39.51■■■■□ 3.92
ACAA1-212ENST00000460424 IGF1RP08069 1367 aa39.48■■■■□ 3.91
ACAA1-212ENST00000460424 SHROOM2Q13796 1616 aa39.39■■■■□ 3.9
ACAA1-212ENST00000460424 CYB5RLQ6IPT4 315 aa39.38■■■■□ 3.89
ACAA1-212ENST00000460424 RUSC2Q8N2Y8 1516 aa39.38■■■■□ 3.89
ACAA1-212ENST00000460424 CARMIL1Q5VZK9 1371 aa39.29■■■■□ 3.88
ACAA1-212ENST00000460424 ERCC6L2Q5T890 1561 aa39.29■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms