RNA–Protein interactions for RNA: ENST00000460404.5

PFN2-204, Transcript of profilin 2, humanhuman

TSL 1 (best)

Gene PFN2, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN2-204ENST00000460404 NISCHQ9Y2I1 1504 aa34.32■■■■□ 3.08
PFN2-204ENST00000460404 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
PFN2-204ENST00000460404 ABCC9O60706 1549 aa30.83■■■□□ 2.53
PFN2-204ENST00000460404 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
PFN2-204ENST00000460404 NACADO15069 1562 aa29.25■■■□□ 2.27
PFN2-204ENST00000460404 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
PFN2-204ENST00000460404 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
PFN2-204ENST00000460404 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
PFN2-204ENST00000460404 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
PFN2-204ENST00000460404 ZCCHC6Q5VYS8 1495 aaKnown RBP28.52■■■□□ 2.16
PFN2-204ENST00000460404 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
PFN2-204ENST00000460404 DCAF1Q9Y4B6 1507 aa28.44■■■□□ 2.14
PFN2-204ENST00000460404 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
PFN2-204ENST00000460404 SHROOM4Q9ULL8 1493 aa28.33■■■□□ 2.13
PFN2-204ENST00000460404 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
PFN2-204ENST00000460404 CECR2Q9BXF3 1484 aa27.85■■■□□ 2.05
PFN2-204ENST00000460404 CC2D2AQ9P2K1 1620 aa27.84■■■□□ 2.05
PFN2-204ENST00000460404 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
PFN2-204ENST00000460404 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
PFN2-204ENST00000460404 SMARCA2P51531 1590 aa26.86■■□□□ 1.89
PFN2-204ENST00000460404 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
PFN2-204ENST00000460404 ERCC6Q03468 1493 aa26.78■■□□□ 1.88
PFN2-204ENST00000460404 HMGXB3Q12766 1538 aa26.76■■□□□ 1.87
PFN2-204ENST00000460404 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
PFN2-204ENST00000460404 CUX2O14529 1486 aa26.75■■□□□ 1.87
PFN2-204ENST00000460404 BAZ1AQ9NRL2 1556 aaPredicted RBP26.72■■□□□ 1.87
PFN2-204ENST00000460404 DNAJC5Q9H3Z4 198 aa26.71■■□□□ 1.87
PFN2-204ENST00000460404 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
PFN2-204ENST00000460404 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
PFN2-204ENST00000460404 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
PFN2-204ENST00000460404 NESP48681 1621 aa26.38■■□□□ 1.81
PFN2-204ENST00000460404 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
PFN2-204ENST00000460404 PDS5BQ9NTI5 1447 aa26.32■■□□□ 1.8
PFN2-204ENST00000460404 THOC2Q8NI27 1593 aaKnown RBP26.17■■□□□ 1.78
PFN2-204ENST00000460404 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
PFN2-204ENST00000460404 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
PFN2-204ENST00000460404 WIZO95785 1651 aa26.05■■□□□ 1.76
PFN2-204ENST00000460404 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
PFN2-204ENST00000460404 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
PFN2-204ENST00000460404 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
PFN2-204ENST00000460404 WDR62O43379 1518 aa25.89■■□□□ 1.74
PFN2-204ENST00000460404 FANCD2Q9BXW9 1451 aa25.84■■□□□ 1.73
PFN2-204ENST00000460404 CFTRP13569 1480 aa25.83■■□□□ 1.73
PFN2-204ENST00000460404 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
PFN2-204ENST00000460404 TOP2AP11388 1531 aaKnown RBP25.81■■□□□ 1.72
PFN2-204ENST00000460404 OSCARQ8IYS5 282 aa25.55■■□□□ 1.68
PFN2-204ENST00000460404 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
PFN2-204ENST00000460404 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
PFN2-204ENST00000460404 PRDM2Q13029 1718 aa25.48■■□□□ 1.67
PFN2-204ENST00000460404 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
PFN2-204ENST00000460404 ABCC8Q09428 1581 aa25.44■■□□□ 1.66
PFN2-204ENST00000460404 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
PFN2-204ENST00000460404 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
PFN2-204ENST00000460404 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
PFN2-204ENST00000460404 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
PFN2-204ENST00000460404 EIF4G3O43432 1585 aaKnown RBP25.1■■□□□ 1.61
PFN2-204ENST00000460404 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
PFN2-204ENST00000460404 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
PFN2-204ENST00000460404 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
PFN2-204ENST00000460404 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
PFN2-204ENST00000460404 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
PFN2-204ENST00000460404 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.595e-12■■■■■ 47.9
PFN2-204ENST00000460404 ARHGEF11O15085 1522 aa25■■□□□ 1.59
PFN2-204ENST00000460404 SOGA1O94964 1423 aa24.99■■□□□ 1.59
PFN2-204ENST00000460404 FBLN2P98095 1184 aa24.99■■□□□ 1.59
PFN2-204ENST00000460404 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
PFN2-204ENST00000460404 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
PFN2-204ENST00000460404 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
PFN2-204ENST00000460404 CYB5RLQ6IPT4 315 aa24.87■■□□□ 1.57
PFN2-204ENST00000460404 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
PFN2-204ENST00000460404 CHD1O14646 1710 aa24.86■■□□□ 1.57
PFN2-204ENST00000460404 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
PFN2-204ENST00000460404 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
PFN2-204ENST00000460404 GRIN2BQ13224 1484 aa24.81■■□□□ 1.56
PFN2-204ENST00000460404 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
PFN2-204ENST00000460404 CUX1P39880 1505 aa24.79■■□□□ 1.56
PFN2-204ENST00000460404 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
PFN2-204ENST00000460404 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
PFN2-204ENST00000460404 ARAP1Q96P48 1450 aa24.7■■□□□ 1.55
PFN2-204ENST00000460404 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
PFN2-204ENST00000460404 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
PFN2-204ENST00000460404 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
PFN2-204ENST00000460404 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
PFN2-204ENST00000460404 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
PFN2-204ENST00000460404 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
PFN2-204ENST00000460404 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
PFN2-204ENST00000460404 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
PFN2-204ENST00000460404 ABCA5Q8WWZ7 1642 aa24.53■■□□□ 1.52
PFN2-204ENST00000460404 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
PFN2-204ENST00000460404 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
PFN2-204ENST00000460404 CHIC1Q5VXU3 224 aa24.4■■□□□ 1.5
PFN2-204ENST00000460404 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
PFN2-204ENST00000460404 ERICH3Q5RHP9 1530 aa24.36■■□□□ 1.49
PFN2-204ENST00000460404 NUP160Q12769 1436 aa24.35■■□□□ 1.49
PFN2-204ENST00000460404 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
PFN2-204ENST00000460404 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
PFN2-204ENST00000460404 JPH4Q96JJ6 628 aa24.16■■□□□ 1.46
PFN2-204ENST00000460404 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
PFN2-204ENST00000460404 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
PFN2-204ENST00000460404 ERCC6L2Q5T890 1561 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms