RNA–Protein interactions for RNA: ENST00000460189.1

PGD-202, Transcript of phosphogluconate dehydrogenase, humanhuman

TSL 2

Gene PGD, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-202ENST00000460189 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
PGD-202ENST00000460189 ABCC9O60706 1549 aa30.45■■■□□ 2.47
PGD-202ENST00000460189 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
PGD-202ENST00000460189 RB1CC1Q8TDY2 1594 aa28.87■■■□□ 2.21
PGD-202ENST00000460189 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
PGD-202ENST00000460189 NACADO15069 1562 aa28.58■■■□□ 2.17
PGD-202ENST00000460189 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
PGD-202ENST00000460189 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
PGD-202ENST00000460189 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
PGD-202ENST00000460189 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
PGD-202ENST00000460189 BICRAQ9NZM4 1560 aa27.97■■■□□ 2.07
PGD-202ENST00000460189 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
PGD-202ENST00000460189 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.02
PGD-202ENST00000460189 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
PGD-202ENST00000460189 SCRIBQ14160 1630 aa27.56■■■□□ 2
PGD-202ENST00000460189 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
PGD-202ENST00000460189 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
PGD-202ENST00000460189 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
PGD-202ENST00000460189 DNAJC5Q9H3Z4 198 aa26.51■■□□□ 1.83
PGD-202ENST00000460189 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
PGD-202ENST00000460189 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
PGD-202ENST00000460189 CUX2O14529 1486 aa26.3■■□□□ 1.8
PGD-202ENST00000460189 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
PGD-202ENST00000460189 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
PGD-202ENST00000460189 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
PGD-202ENST00000460189 HMGXB3Q12766 1538 aa26.18■■□□□ 1.78
PGD-202ENST00000460189 NESP48681 1621 aa26.07■■□□□ 1.76
PGD-202ENST00000460189 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
PGD-202ENST00000460189 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
PGD-202ENST00000460189 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
PGD-202ENST00000460189 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
PGD-202ENST00000460189 LAMC3Q9Y6N6 1575 aa25.84■■□□□ 1.73
PGD-202ENST00000460189 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
PGD-202ENST00000460189 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
PGD-202ENST00000460189 PDS5BQ9NTI5 1447 aa25.73■■□□□ 1.71
PGD-202ENST00000460189 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
PGD-202ENST00000460189 WIZO95785 1651 aa25.54■■□□□ 1.68
PGD-202ENST00000460189 MRC2Q9UBG0 1479 aa25.52■■□□□ 1.68
PGD-202ENST00000460189 WDR62O43379 1518 aa25.42■■□□□ 1.66
PGD-202ENST00000460189 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
PGD-202ENST00000460189 TRIM41Q8WV44 630 aa25.38■■□□□ 1.65
PGD-202ENST00000460189 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
PGD-202ENST00000460189 CFTRP13569 1480 aa25.23■■□□□ 1.63
PGD-202ENST00000460189 RSF1Q96T23 1441 aaPredicted RBP25.22■■□□□ 1.63
PGD-202ENST00000460189 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
PGD-202ENST00000460189 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
PGD-202ENST00000460189 OSCARQ8IYS5 282 aa25.09■■□□□ 1.61
PGD-202ENST00000460189 PRDM2Q13029 1718 aa25■■□□□ 1.59
PGD-202ENST00000460189 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
PGD-202ENST00000460189 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
PGD-202ENST00000460189 ZNF608Q9ULD9 1512 aaPredicted RBP24.84■■□□□ 1.57
PGD-202ENST00000460189 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
PGD-202ENST00000460189 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
PGD-202ENST00000460189 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
PGD-202ENST00000460189 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
PGD-202ENST00000460189 ABCC8Q09428 1581 aa24.74■■□□□ 1.55
PGD-202ENST00000460189 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
PGD-202ENST00000460189 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
PGD-202ENST00000460189 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
PGD-202ENST00000460189 AQRO60306 1485 aaKnown RBP eCLIP24.61■■□□□ 1.532e-7■■■■■ 56.9
PGD-202ENST00000460189 CHD1O14646 1710 aa24.58■■□□□ 1.53
PGD-202ENST00000460189 FBLN2P98095 1184 aa24.58■■□□□ 1.53
PGD-202ENST00000460189 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
PGD-202ENST00000460189 CYB5RLQ6IPT4 315 aa24.55■■□□□ 1.52
PGD-202ENST00000460189 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
PGD-202ENST00000460189 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
PGD-202ENST00000460189 SOGA1O94964 1423 aa24.45■■□□□ 1.51
PGD-202ENST00000460189 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
PGD-202ENST00000460189 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
PGD-202ENST00000460189 TRHP20396 242 aaPredicted RBP24.4■■□□□ 1.5
PGD-202ENST00000460189 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
PGD-202ENST00000460189 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
PGD-202ENST00000460189 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
PGD-202ENST00000460189 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
PGD-202ENST00000460189 CUX1P39880 1505 aa24.3■■□□□ 1.48
PGD-202ENST00000460189 MAGI1Q96QZ7 1491 aaPredicted RBP24.27■■□□□ 1.48
PGD-202ENST00000460189 SYNJ1O43426 1573 aa24.27■■□□□ 1.48
PGD-202ENST00000460189 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
PGD-202ENST00000460189 CLASP1Q7Z460 1538 aa24.24■■□□□ 1.47
PGD-202ENST00000460189 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
PGD-202ENST00000460189 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
PGD-202ENST00000460189 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
PGD-202ENST00000460189 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.45
PGD-202ENST00000460189 ABCA10Q8WWZ4 1543 aa24.06■■□□□ 1.44
PGD-202ENST00000460189 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
PGD-202ENST00000460189 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
PGD-202ENST00000460189 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
PGD-202ENST00000460189 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
PGD-202ENST00000460189 ERCC6L2Q5T890 1561 aa23.87■■□□□ 1.41
PGD-202ENST00000460189 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
PGD-202ENST00000460189 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
PGD-202ENST00000460189 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
PGD-202ENST00000460189 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
PGD-202ENST00000460189 NUP160Q12769 1436 aa23.84■■□□□ 1.41
PGD-202ENST00000460189 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
PGD-202ENST00000460189 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
PGD-202ENST00000460189 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
PGD-202ENST00000460189 PRG4Q92954 1404 aaPredicted RBP23.67■■□□□ 1.38
PGD-202ENST00000460189 JPH4Q96JJ6 628 aa23.63■■□□□ 1.37
PGD-202ENST00000460189 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 224.7 ms