RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 NISCHQ9Y2I1 1504 aa42.33■■■■■ 4.37
TMEM50B-205ENST00000459909 ABCC9O60706 1549 aa38.92■■■■□ 3.82
TMEM50B-205ENST00000459909 CCDC180Q9P1Z9 1646 aa38.23■■■■□ 3.71
TMEM50B-205ENST00000459909 DNAJC5BQ9UF47 199 aa37.14■■■■□ 3.54
TMEM50B-205ENST00000459909 RB1CC1Q8TDY2 1594 aa36.76■■■■□ 3.48
TMEM50B-205ENST00000459909 NACADO15069 1562 aa36.36■■■■□ 3.41
TMEM50B-205ENST00000459909 PABPN1Q86U42 306 aaKnown RBP eCLIP36.15■■■■□ 3.38
TMEM50B-205ENST00000459909 DCAF8L2P0C7V8 631 aa36.03■■■■□ 3.36
TMEM50B-205ENST00000459909 UNC13AQ9UPW8 1703 aa35.8■■■■□ 3.32
TMEM50B-205ENST00000459909 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
TMEM50B-205ENST00000459909 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
TMEM50B-205ENST00000459909 SHROOM4Q9ULL8 1493 aa35.22■■■■□ 3.23
TMEM50B-205ENST00000459909 CECR2Q9BXF3 1484 aa35.16■■■■□ 3.22
TMEM50B-205ENST00000459909 CC2D2AQ9P2K1 1620 aa35.11■■■■□ 3.21
TMEM50B-205ENST00000459909 DCAF1Q9Y4B6 1507 aa34.95■■■■□ 3.19
TMEM50B-205ENST00000459909 ZCCHC6Q5VYS8 1495 aaKnown RBP34.94■■■■□ 3.18
TMEM50B-205ENST00000459909 EIF4G1Q04637 1599 aaKnown RBP34.89■■■■□ 3.18
TMEM50B-205ENST00000459909 SCRIBQ14160 1630 aa34.78■■■■□ 3.16
TMEM50B-205ENST00000459909 DNAJC5Q9H3Z4 198 aa34.64■■■■□ 3.14
TMEM50B-205ENST00000459909 CUX2O14529 1486 aa33.88■■■■□ 3.01
TMEM50B-205ENST00000459909 ERCC6Q03468 1493 aa33.69■■■□□ 2.98
TMEM50B-205ENST00000459909 NCAPD3P42695 1498 aa33.61■■■□□ 2.97
TMEM50B-205ENST00000459909 ATAD2BQ9ULI0 1458 aa33.39■■■□□ 2.94
TMEM50B-205ENST00000459909 HMGXB3Q12766 1538 aa33.27■■■□□ 2.92
TMEM50B-205ENST00000459909 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
TMEM50B-205ENST00000459909 NESP48681 1621 aa33.23■■■□□ 2.91
TMEM50B-205ENST00000459909 SMARCA4P51532 1647 aa33.13■■■□□ 2.89
TMEM50B-205ENST00000459909 THOC2Q8NI27 1593 aaKnown RBP33.02■■■□□ 2.88
TMEM50B-205ENST00000459909 BAZ1BQ9UIG0 1483 aaKnown RBP33.02■■■□□ 2.88
TMEM50B-205ENST00000459909 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
TMEM50B-205ENST00000459909 BAZ1AQ9NRL2 1556 aaPredicted RBP32.91■■■□□ 2.86
TMEM50B-205ENST00000459909 PEG3Q9GZU2 1588 aa32.85■■■□□ 2.85
TMEM50B-205ENST00000459909 TRIM41Q8WV44 630 aa32.81■■■□□ 2.84
TMEM50B-205ENST00000459909 PDS5BQ9NTI5 1447 aa32.8■■■□□ 2.84
TMEM50B-205ENST00000459909 KIF21AQ7Z4S6 1674 aa32.72■■■□□ 2.83
TMEM50B-205ENST00000459909 MROH2BQ7Z745 1585 aa32.58■■■□□ 2.81
TMEM50B-205ENST00000459909 CADPSQ9ULU8 1353 aa32.56■■■□□ 2.8
TMEM50B-205ENST00000459909 MRC2Q9UBG0 1479 aa32.53■■■□□ 2.8
TMEM50B-205ENST00000459909 WDR62O43379 1518 aa32.46■■■□□ 2.79
TMEM50B-205ENST00000459909 CEP164Q9UPV0 1460 aa32.25■■■□□ 2.75
TMEM50B-205ENST00000459909 OSCARQ8IYS5 282 aa32.24■■■□□ 2.75
TMEM50B-205ENST00000459909 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
TMEM50B-205ENST00000459909 WIZO95785 1651 aa32.11■■■□□ 2.73
TMEM50B-205ENST00000459909 CFTRP13569 1480 aa32.03■■■□□ 2.72
TMEM50B-205ENST00000459909 URB2Q14146 1524 aaKnown RBP31.92■■■□□ 2.7
TMEM50B-205ENST00000459909 RIMBP3CA6NJZ7 1639 aa31.8■■■□□ 2.68
TMEM50B-205ENST00000459909 RIMBP3BA6NNM3 1639 aa31.8■■■□□ 2.68
TMEM50B-205ENST00000459909 RIMBP3Q9UFD9 1639 aa31.8■■■□□ 2.68
TMEM50B-205ENST00000459909 TOP2AP11388 1531 aaKnown RBP31.72■■■□□ 2.67
TMEM50B-205ENST00000459909 RSF1Q96T23 1441 aaPredicted RBP31.7■■■□□ 2.67
TMEM50B-205ENST00000459909 ARHGEF11O15085 1522 aa31.67■■■□□ 2.66
TMEM50B-205ENST00000459909 IFT140Q96RY7 1462 aa31.65■■■□□ 2.66
TMEM50B-205ENST00000459909 ZNF608Q9ULD9 1512 aaPredicted RBP31.64■■■□□ 2.66
TMEM50B-205ENST00000459909 CYB5RLQ6IPT4 315 aa31.51■■■□□ 2.63
TMEM50B-205ENST00000459909 PRDM2Q13029 1718 aa31.51■■■□□ 2.63
TMEM50B-205ENST00000459909 TOPBP1Q92547 1522 aa31.46■■■□□ 2.63
TMEM50B-205ENST00000459909 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.62
TMEM50B-205ENST00000459909 ABCC8Q09428 1581 aa31.39■■■□□ 2.62
TMEM50B-205ENST00000459909 TRHP20396 242 aaPredicted RBP31.38■■■□□ 2.61
TMEM50B-205ENST00000459909 CCDC88BA6NC98 1476 aa31.38■■■□□ 2.61
TMEM50B-205ENST00000459909 ARAP1Q96P48 1450 aa31.31■■■□□ 2.6
TMEM50B-205ENST00000459909 AQRO60306 1485 aaKnown RBP eCLIP31.28■■■□□ 2.61e-9■■■□□ 17.5
TMEM50B-205ENST00000459909 DNMBPQ6XZF7 1577 aa31.28■■■□□ 2.6
TMEM50B-205ENST00000459909 CHD1O14646 1710 aa31.24■■■□□ 2.59
TMEM50B-205ENST00000459909 FBLN2P98095 1184 aa31.22■■■□□ 2.59
TMEM50B-205ENST00000459909 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.59
TMEM50B-205ENST00000459909 POLA1P09884 1462 aaPredicted RBP31.1■■■□□ 2.57
TMEM50B-205ENST00000459909 TDRD9Q8NDG6 1382 aaKnown RBP30.99■■■□□ 2.55
TMEM50B-205ENST00000459909 RAD54L2Q9Y4B4 1467 aa30.99■■■□□ 2.55
TMEM50B-205ENST00000459909 AEBP2Q6ZN18 517 aaPredicted RBP30.98■■■□□ 2.55
TMEM50B-205ENST00000459909 SOGA1O94964 1423 aa30.97■■■□□ 2.55
TMEM50B-205ENST00000459909 CLASP1Q7Z460 1538 aa30.94■■■□□ 2.54
TMEM50B-205ENST00000459909 SNAPC4Q5SXM2 1469 aa30.94■■■□□ 2.54
TMEM50B-205ENST00000459909 CHMP7Q8WUX9 453 aaPredicted RBP30.91■■■□□ 2.54
TMEM50B-205ENST00000459909 WDR97A6NE52 1622 aa30.88■■■□□ 2.53
TMEM50B-205ENST00000459909 SYNJ1O43426 1573 aa30.88■■■□□ 2.53
TMEM50B-205ENST00000459909 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
TMEM50B-205ENST00000459909 FGD5Q6ZNL6 1462 aa30.8■■■□□ 2.52
TMEM50B-205ENST00000459909 GRIN2BQ13224 1484 aa30.78■■■□□ 2.52
TMEM50B-205ENST00000459909 SYNJ2O15056 1496 aa30.75■■■□□ 2.51
TMEM50B-205ENST00000459909 GAPVD1Q14C86 1478 aa30.69■■■□□ 2.5
TMEM50B-205ENST00000459909 CUX1P39880 1505 aa30.66■■■□□ 2.5
TMEM50B-205ENST00000459909 PBRM1Q86U86 1689 aa30.5■■■□□ 2.47
TMEM50B-205ENST00000459909 ABCA10Q8WWZ4 1543 aa30.44■■■□□ 2.46
TMEM50B-205ENST00000459909 ABCA5Q8WWZ7 1642 aa30.4■■■□□ 2.46
TMEM50B-205ENST00000459909 ERCC6L2Q5T890 1561 aa30.38■■■□□ 2.45
TMEM50B-205ENST00000459909 GRIN2AQ12879 1464 aa30.37■■■□□ 2.45
TMEM50B-205ENST00000459909 NUP160Q12769 1436 aa30.31■■■□□ 2.44
TMEM50B-205ENST00000459909 CEP170Q5SW79 1584 aa30.31■■■□□ 2.44
TMEM50B-205ENST00000459909 ADAMTS12P58397 1594 aa30.23■■■□□ 2.43
TMEM50B-205ENST00000459909 SHROOM2Q13796 1616 aa30.2■■■□□ 2.43
TMEM50B-205ENST00000459909 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.42
TMEM50B-205ENST00000459909 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
TMEM50B-205ENST00000459909 KIF13AQ9H1H9 1805 aa30.1■■■□□ 2.41
TMEM50B-205ENST00000459909 PRG4Q92954 1404 aaPredicted RBP30.07■■■□□ 2.4
TMEM50B-205ENST00000459909 ERICH3Q5RHP9 1530 aa30.04■■■□□ 2.4
TMEM50B-205ENST00000459909 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
TMEM50B-205ENST00000459909 FAM69CQ0P6D2 419 aa30■■■□□ 2.39
TMEM50B-205ENST00000459909 ABCC10Q5T3U5 1492 aa29.99■■■□□ 2.39
TMEM50B-205ENST00000459909 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms