RNA–Protein interactions for RNA: ENST00000459752.5

PATJ-204, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,349 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-204ENST00000459752 NISCHQ9Y2I1 1504 aa14.41□□□□□ -0.1
PATJ-204ENST00000459752 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
PATJ-204ENST00000459752 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
PATJ-204ENST00000459752 SUPT5HO00267 1087 aaKnown RBP13.63□□□□□ -0.23
PATJ-204ENST00000459752 MYT1Q01538 1121 aa13.58□□□□□ -0.24
PATJ-204ENST00000459752 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
PATJ-204ENST00000459752 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.26
PATJ-204ENST00000459752 CENPBP07199 599 aaPredicted RBP13.4□□□□□ -0.26
PATJ-204ENST00000459752 APLP2Q06481 763 aa13.32□□□□□ -0.28
PATJ-204ENST00000459752 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
PATJ-204ENST00000459752 ZEB1P37275 1124 aaPredicted RBP13.22□□□□□ -0.29
PATJ-204ENST00000459752 PCGF6Q9BYE7 350 aa13.15□□□□□ -0.31
PATJ-204ENST00000459752 SHROOM4Q9ULL8 1493 aa13.08□□□□□ -0.31
PATJ-204ENST00000459752 NEFLP07196 543 aa13.07□□□□□ -0.32
PATJ-204ENST00000459752 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
PATJ-204ENST00000459752 TTBK1Q5TCY1 1321 aaPredicted RBP12.88□□□□□ -0.35
PATJ-204ENST00000459752 YTHDC1Q96MU7 727 aaKnown RBP12.83□□□□□ -0.36
PATJ-204ENST00000459752 DAXXQ9UER7 740 aaPredicted RBP12.78□□□□□ -0.36
PATJ-204ENST00000459752 CCDC180Q9P1Z9 1646 aa12.73□□□□□ -0.37
PATJ-204ENST00000459752 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
PATJ-204ENST00000459752 RANGAP1P46060 587 aaPredicted RBP12.59□□□□□ -0.39
PATJ-204ENST00000459752 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
PATJ-204ENST00000459752 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
PATJ-204ENST00000459752 HRCP23327 699 aa12.57□□□□□ -0.4
PATJ-204ENST00000459752 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
PATJ-204ENST00000459752 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
PATJ-204ENST00000459752 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
PATJ-204ENST00000459752 CLSPNQ9HAW4 1339 aa12.32□□□□□ -0.44
PATJ-204ENST00000459752 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
PATJ-204ENST00000459752 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
PATJ-204ENST00000459752 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
PATJ-204ENST00000459752 ITGAEP38570 1179 aa12.2□□□□□ -0.46
PATJ-204ENST00000459752 CDK11AQ9UQ88 783 aaPredicted RBP12.19□□□□□ -0.46
PATJ-204ENST00000459752 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
PATJ-204ENST00000459752 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
PATJ-204ENST00000459752 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
PATJ-204ENST00000459752 BCANQ96GW7 911 aa12.08□□□□□ -0.48
PATJ-204ENST00000459752 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
PATJ-204ENST00000459752 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
PATJ-204ENST00000459752 GLIPR1L2Q4G1C9 344 aa12.07□□□□□ -0.48
PATJ-204ENST00000459752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
PATJ-204ENST00000459752 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
PATJ-204ENST00000459752 LOC105371045A0A1W2PR82 267 aa12.04□□□□□ -0.48
PATJ-204ENST00000459752 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
PATJ-204ENST00000459752 EIF5BO60841 1220 aaKnown RBP12.03□□□□□ -0.48
PATJ-204ENST00000459752 ANP32AP39687 249 aaKnown RBP12.02□□□□□ -0.48
PATJ-204ENST00000459752 ANP32CO43423 234 aa12.01□□□□□ -0.49
PATJ-204ENST00000459752 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
PATJ-204ENST00000459752 CHIC1Q5VXU3 224 aa11.99□□□□□ -0.49
PATJ-204ENST00000459752 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
PATJ-204ENST00000459752 ABCC9O60706 1549 aa11.97□□□□□ -0.49
PATJ-204ENST00000459752 ANP32BQ92688 251 aaKnown RBP11.96□□□□□ -0.5
PATJ-204ENST00000459752 NACADO15069 1562 aa11.93□□□□□ -0.5
PATJ-204ENST00000459752 MYO15BQ96JP2 1530 aa11.92□□□□□ -0.5
PATJ-204ENST00000459752 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
PATJ-204ENST00000459752 CANXP27824 592 aaKnown RBP11.88□□□□□ -0.51
PATJ-204ENST00000459752 NEUROD1Q13562 356 aa11.86□□□□□ -0.51
PATJ-204ENST00000459752 TRIM52Q96A61 297 aa11.85□□□□□ -0.51
PATJ-204ENST00000459752 FAM50AQ14320 339 aaKnown RBP11.85□□□□□ -0.51
PATJ-204ENST00000459752 NPM2Q86SE8 214 aaKnown RBP11.82□□□□□ -0.52
PATJ-204ENST00000459752 NEFMP07197 916 aa11.78□□□□□ -0.52
PATJ-204ENST00000459752 UPF2Q9HAU5 1272 aaKnown RBP11.77□□□□□ -0.53
PATJ-204ENST00000459752 HSP90AA1P07900 732 aaKnown RBP11.76□□□□□ -0.53
PATJ-204ENST00000459752 FKBP8Q14318 412 aa11.74□□□□□ -0.53
PATJ-204ENST00000459752 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
PATJ-204ENST00000459752 BCL11AQ9H165 835 aa11.71□□□□□ -0.54
PATJ-204ENST00000459752 NBR1Q14596 966 aa11.65□□□□□ -0.54
PATJ-204ENST00000459752 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
PATJ-204ENST00000459752 TNNT2P45379 298 aaPredicted RBP11.62□□□□□ -0.55
PATJ-204ENST00000459752 CCDC136Q96JN2 1154 aa11.61□□□□□ -0.55
PATJ-204ENST00000459752 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
PATJ-204ENST00000459752 ANP32EQ9BTT0 268 aa11.6□□□□□ -0.55
PATJ-204ENST00000459752 SCRIBQ14160 1630 aa11.59□□□□□ -0.55
PATJ-204ENST00000459752 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.58□□□□□ -0.56
PATJ-204ENST00000459752 TRIM44Q96DX7 344 aaPredicted RBP11.55□□□□□ -0.56
PATJ-204ENST00000459752 ARXQ96QS3 562 aa11.53□□□□□ -0.56
PATJ-204ENST00000459752 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
PATJ-204ENST00000459752 ERICH6BQ5W0A0 696 aa11.51□□□□□ -0.57
PATJ-204ENST00000459752 FAM9BQ8IZU0 186 aa11.5□□□□□ -0.57
PATJ-204ENST00000459752 BECN1Q14457 450 aa11.49□□□□□ -0.57
PATJ-204ENST00000459752 TONSLQ96HA7 1378 aa11.49□□□□□ -0.57
PATJ-204ENST00000459752 SCAF1Q9H7N4 1312 aaKnown RBP11.48□□□□□ -0.57
PATJ-204ENST00000459752 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
PATJ-204ENST00000459752 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
PATJ-204ENST00000459752 GOLGA6L22H0YM25 854 aa11.46□□□□□ -0.57
PATJ-204ENST00000459752 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.57
PATJ-204ENST00000459752 TMC1Q8TDI8 760 aa11.45□□□□□ -0.58
PATJ-204ENST00000459752 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
PATJ-204ENST00000459752 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
PATJ-204ENST00000459752 MRS2Q9HD23 443 aa11.39□□□□□ -0.59
PATJ-204ENST00000459752 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
PATJ-204ENST00000459752 MYH16Q9H6N6 1097 aa11.39□□□□□ -0.59
PATJ-204ENST00000459752 PTMAP06454 111 aaKnown RBP11.39□□□□□ -0.59
PATJ-204ENST00000459752 NAP1L5Q96NT1 182 aaPredicted RBP11.38□□□□□ -0.59
PATJ-204ENST00000459752 DNTTIP2Q5QJE6 756 aaKnown RBP11.37□□□□□ -0.59
PATJ-204ENST00000459752 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
PATJ-204ENST00000459752 MIER1Q8N108 512 aa11.34□□□□□ -0.59
PATJ-204ENST00000459752 IRX6P78412 446 aaPredicted RBP11.33□□□□□ -0.6
PATJ-204ENST00000459752 ZRSR1Q15695 479 aaKnown RBP11.32□□□□□ -0.6
PATJ-204ENST00000459752 ZNF777Q9ULD5 760 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms