RNA–Protein interactions for RNA: ENST00000459726.1

RBM28-203, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-203ENST00000459726 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
RBM28-203ENST00000459726 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
RBM28-203ENST00000459726 ABCC9O60706 1549 aa28.72■■■□□ 2.19
RBM28-203ENST00000459726 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
RBM28-203ENST00000459726 NACADO15069 1562 aa27.76■■■□□ 2.03
RBM28-203ENST00000459726 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
RBM28-203ENST00000459726 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
RBM28-203ENST00000459726 MYO15BQ96JP2 1530 aa27.69■■■□□ 2.02
RBM28-203ENST00000459726 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
RBM28-203ENST00000459726 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
RBM28-203ENST00000459726 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
RBM28-203ENST00000459726 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
RBM28-203ENST00000459726 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
RBM28-203ENST00000459726 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
RBM28-203ENST00000459726 EIF4G1Q04637 1599 aaKnown RBP26.19■■□□□ 1.78
RBM28-203ENST00000459726 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
RBM28-203ENST00000459726 CECR2Q9BXF3 1484 aa26.08■■□□□ 1.77
RBM28-203ENST00000459726 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
RBM28-203ENST00000459726 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
RBM28-203ENST00000459726 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
RBM28-203ENST00000459726 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
RBM28-203ENST00000459726 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
RBM28-203ENST00000459726 PEG3Q9GZU2 1588 aa25.68■■□□□ 1.7
RBM28-203ENST00000459726 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
RBM28-203ENST00000459726 WIZO95785 1651 aa25.61■■□□□ 1.69
RBM28-203ENST00000459726 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
RBM28-203ENST00000459726 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
RBM28-203ENST00000459726 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
RBM28-203ENST00000459726 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
RBM28-203ENST00000459726 TOP2AP11388 1531 aaKnown RBP25.3■■□□□ 1.64
RBM28-203ENST00000459726 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
RBM28-203ENST00000459726 NESP48681 1621 aa24.98■■□□□ 1.59
RBM28-203ENST00000459726 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
RBM28-203ENST00000459726 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
RBM28-203ENST00000459726 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
RBM28-203ENST00000459726 CFTRP13569 1480 aa24.8■■□□□ 1.56
RBM28-203ENST00000459726 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
RBM28-203ENST00000459726 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
RBM28-203ENST00000459726 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
RBM28-203ENST00000459726 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
RBM28-203ENST00000459726 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
RBM28-203ENST00000459726 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
RBM28-203ENST00000459726 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
RBM28-203ENST00000459726 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
RBM28-203ENST00000459726 WDR62O43379 1518 aa24.4■■□□□ 1.5
RBM28-203ENST00000459726 URB2Q14146 1524 aaKnown RBP24.39■■□□□ 1.49
RBM28-203ENST00000459726 CUX2O14529 1486 aa24.32■■□□□ 1.48
RBM28-203ENST00000459726 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
RBM28-203ENST00000459726 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
RBM28-203ENST00000459726 CUX1P39880 1505 aa24.22■■□□□ 1.47
RBM28-203ENST00000459726 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
RBM28-203ENST00000459726 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
RBM28-203ENST00000459726 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
RBM28-203ENST00000459726 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
RBM28-203ENST00000459726 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.45
RBM28-203ENST00000459726 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
RBM28-203ENST00000459726 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
RBM28-203ENST00000459726 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
RBM28-203ENST00000459726 IFT140Q96RY7 1462 aa24■■□□□ 1.43
RBM28-203ENST00000459726 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
RBM28-203ENST00000459726 WDR97A6NE52 1622 aa23.95■■□□□ 1.42
RBM28-203ENST00000459726 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
RBM28-203ENST00000459726 SOGA1O94964 1423 aa23.93■■□□□ 1.42
RBM28-203ENST00000459726 EIF4G3O43432 1585 aaKnown RBP23.87■■□□□ 1.41
RBM28-203ENST00000459726 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
RBM28-203ENST00000459726 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.45e-7■■■□□ 18.6
RBM28-203ENST00000459726 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
RBM28-203ENST00000459726 ABCA5Q8WWZ7 1642 aa23.77■■□□□ 1.4
RBM28-203ENST00000459726 PBRM1Q86U86 1689 aa23.71■■□□□ 1.39
RBM28-203ENST00000459726 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
RBM28-203ENST00000459726 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
RBM28-203ENST00000459726 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
RBM28-203ENST00000459726 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
RBM28-203ENST00000459726 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
RBM28-203ENST00000459726 CHD1O14646 1710 aa23.55■■□□□ 1.36
RBM28-203ENST00000459726 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
RBM28-203ENST00000459726 MAGI1Q96QZ7 1491 aaPredicted RBP23.54■■□□□ 1.36
RBM28-203ENST00000459726 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
RBM28-203ENST00000459726 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
RBM28-203ENST00000459726 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
RBM28-203ENST00000459726 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
RBM28-203ENST00000459726 IGF1RP08069 1367 aa23.44■■□□□ 1.34
RBM28-203ENST00000459726 CUL7Q14999 1698 aa23.41■■□□□ 1.34
RBM28-203ENST00000459726 FHAD1B1AJZ9 1412 aa23.4■■□□□ 1.34
RBM28-203ENST00000459726 FBLN2P98095 1184 aa23.35■■□□□ 1.33
RBM28-203ENST00000459726 GRIN2AQ12879 1464 aa23.35■■□□□ 1.33
RBM28-203ENST00000459726 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
RBM28-203ENST00000459726 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
RBM28-203ENST00000459726 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
RBM28-203ENST00000459726 CEP170Q5SW79 1584 aa23.28■■□□□ 1.32
RBM28-203ENST00000459726 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
RBM28-203ENST00000459726 EEA1Q15075 1411 aa23.25■■□□□ 1.31
RBM28-203ENST00000459726 NUP160Q12769 1436 aa23.25■■□□□ 1.31
RBM28-203ENST00000459726 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
RBM28-203ENST00000459726 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
RBM28-203ENST00000459726 FAM9AQ8IZU1 332 aaPredicted RBP23.2■■□□□ 1.3
RBM28-203ENST00000459726 RAPGEF2Q9Y4G8 1499 aa23.19■■□□□ 1.3
RBM28-203ENST00000459726 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
RBM28-203ENST00000459726 KIF21BO75037 1637 aa23.1■■□□□ 1.29
RBM28-203ENST00000459726 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms