RNA–Protein interactions for RNA: ENST00000458438.2

LYRM4-203, Transcript of LYR motif containing 4, humanhuman

TSL 2

Gene LYRM4, Length 941 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-203ENST00000458438 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
LYRM4-203ENST00000458438 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.1
LYRM4-203ENST00000458438 ABCC9O60706 1549 aa27.72■■■□□ 2.03
LYRM4-203ENST00000458438 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
LYRM4-203ENST00000458438 NACADO15069 1562 aa26.47■■□□□ 1.83
LYRM4-203ENST00000458438 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
LYRM4-203ENST00000458438 MYO15BQ96JP2 1530 aa26.21■■□□□ 1.79
LYRM4-203ENST00000458438 ZCCHC6Q5VYS8 1495 aaKnown RBP26.18■■□□□ 1.78
LYRM4-203ENST00000458438 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
LYRM4-203ENST00000458438 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
LYRM4-203ENST00000458438 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
LYRM4-203ENST00000458438 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
LYRM4-203ENST00000458438 DNAJC5BQ9UF47 199 aa25.65■■□□□ 1.7
LYRM4-203ENST00000458438 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
LYRM4-203ENST00000458438 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
LYRM4-203ENST00000458438 EIF4G1Q04637 1599 aaKnown RBP25.12■■□□□ 1.61
LYRM4-203ENST00000458438 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
LYRM4-203ENST00000458438 CECR2Q9BXF3 1484 aa24.91■■□□□ 1.58
LYRM4-203ENST00000458438 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
LYRM4-203ENST00000458438 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
LYRM4-203ENST00000458438 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
LYRM4-203ENST00000458438 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
LYRM4-203ENST00000458438 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
LYRM4-203ENST00000458438 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
LYRM4-203ENST00000458438 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
LYRM4-203ENST00000458438 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
LYRM4-203ENST00000458438 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
LYRM4-203ENST00000458438 WIZO95785 1651 aa24.05■■□□□ 1.44
LYRM4-203ENST00000458438 NESP48681 1621 aa23.94■■□□□ 1.42
LYRM4-203ENST00000458438 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
LYRM4-203ENST00000458438 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
LYRM4-203ENST00000458438 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
LYRM4-203ENST00000458438 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
LYRM4-203ENST00000458438 CUX2O14529 1486 aa23.7■■□□□ 1.38
LYRM4-203ENST00000458438 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.38
LYRM4-203ENST00000458438 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
LYRM4-203ENST00000458438 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
LYRM4-203ENST00000458438 THOC2Q8NI27 1593 aaKnown RBP23.64■■□□□ 1.37
LYRM4-203ENST00000458438 DNAJC5Q9H3Z4 198 aa23.52■■□□□ 1.36
LYRM4-203ENST00000458438 CFTRP13569 1480 aa23.5■■□□□ 1.35
LYRM4-203ENST00000458438 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
LYRM4-203ENST00000458438 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
LYRM4-203ENST00000458438 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
LYRM4-203ENST00000458438 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
LYRM4-203ENST00000458438 PRDM2Q13029 1718 aa23.41■■□□□ 1.34
LYRM4-203ENST00000458438 WDR62O43379 1518 aa23.38■■□□□ 1.33
LYRM4-203ENST00000458438 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
LYRM4-203ENST00000458438 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
LYRM4-203ENST00000458438 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
LYRM4-203ENST00000458438 ABCC8Q09428 1581 aa23■■□□□ 1.27
LYRM4-203ENST00000458438 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
LYRM4-203ENST00000458438 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
LYRM4-203ENST00000458438 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
LYRM4-203ENST00000458438 TARBP1Q13395 1621 aaKnown RBP22.84■■□□□ 1.25
LYRM4-203ENST00000458438 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
LYRM4-203ENST00000458438 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
LYRM4-203ENST00000458438 CUX1P39880 1505 aa22.79■■□□□ 1.24
LYRM4-203ENST00000458438 FGD5Q6ZNL6 1462 aa22.74■■□□□ 1.23
LYRM4-203ENST00000458438 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
LYRM4-203ENST00000458438 SOGA1O94964 1423 aa22.72■■□□□ 1.23
LYRM4-203ENST00000458438 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.23
LYRM4-203ENST00000458438 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
LYRM4-203ENST00000458438 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
LYRM4-203ENST00000458438 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
LYRM4-203ENST00000458438 CHD1O14646 1710 aa22.59■■□□□ 1.21
LYRM4-203ENST00000458438 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
LYRM4-203ENST00000458438 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
LYRM4-203ENST00000458438 TOP2BQ02880 1626 aa22.54■■□□□ 1.2
LYRM4-203ENST00000458438 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
LYRM4-203ENST00000458438 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
LYRM4-203ENST00000458438 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
LYRM4-203ENST00000458438 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
LYRM4-203ENST00000458438 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
LYRM4-203ENST00000458438 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
LYRM4-203ENST00000458438 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
LYRM4-203ENST00000458438 FBLN2P98095 1184 aa22.46■■□□□ 1.19
LYRM4-203ENST00000458438 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
LYRM4-203ENST00000458438 MAGI1Q96QZ7 1491 aaPredicted RBP22.43■■□□□ 1.18
LYRM4-203ENST00000458438 RIMBP3CA6NJZ7 1639 aa22.41■■□□□ 1.18
LYRM4-203ENST00000458438 RIMBP3BA6NNM3 1639 aa22.41■■□□□ 1.18
LYRM4-203ENST00000458438 RIMBP3Q9UFD9 1639 aa22.41■■□□□ 1.18
LYRM4-203ENST00000458438 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
LYRM4-203ENST00000458438 CHMP7Q8WUX9 453 aaPredicted RBP22.35■■□□□ 1.17
LYRM4-203ENST00000458438 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
LYRM4-203ENST00000458438 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
LYRM4-203ENST00000458438 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
LYRM4-203ENST00000458438 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
LYRM4-203ENST00000458438 GRIN2AQ12879 1464 aa22.2■■□□□ 1.14
LYRM4-203ENST00000458438 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
LYRM4-203ENST00000458438 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
LYRM4-203ENST00000458438 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
LYRM4-203ENST00000458438 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
LYRM4-203ENST00000458438 NUP160Q12769 1436 aa22.09■■□□□ 1.13
LYRM4-203ENST00000458438 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
LYRM4-203ENST00000458438 CUL7Q14999 1698 aa22.01■■□□□ 1.11
LYRM4-203ENST00000458438 IGF1RP08069 1367 aa22.01■■□□□ 1.11
LYRM4-203ENST00000458438 SHROOM2Q13796 1616 aa22■■□□□ 1.11
LYRM4-203ENST00000458438 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
LYRM4-203ENST00000458438 RUSC2Q8N2Y8 1516 aa21.95■■□□□ 1.1
LYRM4-203ENST00000458438 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms