RNA–Protein interactions for RNA: ENST00000458397.1

GAPDHP53-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 53, humanhuman

BASIC

Gene GAPDHP53, Length 924 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP53-201ENST00000458397 NISCHQ9Y2I1 1504 aa17.31■□□□□ 0.36
GAPDHP53-201ENST00000458397 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.04
GAPDHP53-201ENST00000458397 ABCC9O60706 1549 aa14.92□□□□□ -0.02
GAPDHP53-201ENST00000458397 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
GAPDHP53-201ENST00000458397 NACADO15069 1562 aa14.4□□□□□ -0.1
GAPDHP53-201ENST00000458397 MYO15BQ96JP2 1530 aa14.39□□□□□ -0.11
GAPDHP53-201ENST00000458397 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
GAPDHP53-201ENST00000458397 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
GAPDHP53-201ENST00000458397 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
GAPDHP53-201ENST00000458397 UNC13AQ9UPW8 1703 aa14.05□□□□□ -0.16
GAPDHP53-201ENST00000458397 BICRAQ9NZM4 1560 aa14.01□□□□□ -0.17
GAPDHP53-201ENST00000458397 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
GAPDHP53-201ENST00000458397 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
GAPDHP53-201ENST00000458397 SHROOM4Q9ULL8 1493 aa13.86□□□□□ -0.19
GAPDHP53-201ENST00000458397 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
GAPDHP53-201ENST00000458397 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
GAPDHP53-201ENST00000458397 CC2D2AQ9P2K1 1620 aa13.5□□□□□ -0.25
GAPDHP53-201ENST00000458397 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
GAPDHP53-201ENST00000458397 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
GAPDHP53-201ENST00000458397 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
GAPDHP53-201ENST00000458397 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
GAPDHP53-201ENST00000458397 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
GAPDHP53-201ENST00000458397 NCAPD3P42695 1498 aa13.32□□□□□ -0.28
GAPDHP53-201ENST00000458397 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
GAPDHP53-201ENST00000458397 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
GAPDHP53-201ENST00000458397 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
GAPDHP53-201ENST00000458397 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
GAPDHP53-201ENST00000458397 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
GAPDHP53-201ENST00000458397 WIZO95785 1651 aa13.16□□□□□ -0.3
GAPDHP53-201ENST00000458397 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
GAPDHP53-201ENST00000458397 NESP48681 1621 aa12.95□□□□□ -0.34
GAPDHP53-201ENST00000458397 LAMC3Q9Y6N6 1575 aa12.91□□□□□ -0.34
GAPDHP53-201ENST00000458397 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
GAPDHP53-201ENST00000458397 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.34
GAPDHP53-201ENST00000458397 CFTRP13569 1480 aa12.87□□□□□ -0.35
GAPDHP53-201ENST00000458397 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
GAPDHP53-201ENST00000458397 SUPT5HO00267 1087 aaKnown RBP12.81□□□□□ -0.36
GAPDHP53-201ENST00000458397 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
GAPDHP53-201ENST00000458397 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.36
GAPDHP53-201ENST00000458397 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.37
GAPDHP53-201ENST00000458397 DNAJC5Q9H3Z4 198 aa12.76□□□□□ -0.37
GAPDHP53-201ENST00000458397 FANCD2Q9BXW9 1451 aa12.75□□□□□ -0.37
GAPDHP53-201ENST00000458397 CUX2O14529 1486 aa12.71□□□□□ -0.38
GAPDHP53-201ENST00000458397 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
GAPDHP53-201ENST00000458397 PRDM2Q13029 1718 aa12.71□□□□□ -0.38
GAPDHP53-201ENST00000458397 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
GAPDHP53-201ENST00000458397 WDR62O43379 1518 aa12.68□□□□□ -0.38
GAPDHP53-201ENST00000458397 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
GAPDHP53-201ENST00000458397 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
GAPDHP53-201ENST00000458397 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
GAPDHP53-201ENST00000458397 ABCC8Q09428 1581 aa12.53□□□□□ -0.4
GAPDHP53-201ENST00000458397 CUX1P39880 1505 aa12.52□□□□□ -0.41
GAPDHP53-201ENST00000458397 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
GAPDHP53-201ENST00000458397 IFT140Q96RY7 1462 aa12.46□□□□□ -0.42
GAPDHP53-201ENST00000458397 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
GAPDHP53-201ENST00000458397 FGD5Q6ZNL6 1462 aa12.43□□□□□ -0.42
GAPDHP53-201ENST00000458397 WRNQ14191 1432 aaPredicted RBP eCLIP12.42□□□□□ -0.42
GAPDHP53-201ENST00000458397 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
GAPDHP53-201ENST00000458397 SYNJ1O43426 1573 aa12.41□□□□□ -0.42
GAPDHP53-201ENST00000458397 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
GAPDHP53-201ENST00000458397 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.42
GAPDHP53-201ENST00000458397 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
GAPDHP53-201ENST00000458397 SOGA1O94964 1423 aa12.37□□□□□ -0.43
GAPDHP53-201ENST00000458397 EIF4G3O43432 1585 aaKnown RBP12.35□□□□□ -0.43
GAPDHP53-201ENST00000458397 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
GAPDHP53-201ENST00000458397 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
GAPDHP53-201ENST00000458397 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.44
GAPDHP53-201ENST00000458397 TDRD9Q8NDG6 1382 aaKnown RBP12.31□□□□□ -0.44
GAPDHP53-201ENST00000458397 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
GAPDHP53-201ENST00000458397 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
GAPDHP53-201ENST00000458397 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
GAPDHP53-201ENST00000458397 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
GAPDHP53-201ENST00000458397 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.45
GAPDHP53-201ENST00000458397 PBRM1Q86U86 1689 aa12.19□□□□□ -0.46
GAPDHP53-201ENST00000458397 ERICH3Q5RHP9 1530 aa12.17□□□□□ -0.46
GAPDHP53-201ENST00000458397 SYNJ2O15056 1496 aa12.16□□□□□ -0.46
GAPDHP53-201ENST00000458397 ADAMTS12P58397 1594 aa12.16□□□□□ -0.46
GAPDHP53-201ENST00000458397 CHD1O14646 1710 aa12.15□□□□□ -0.46
GAPDHP53-201ENST00000458397 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
GAPDHP53-201ENST00000458397 OSCARQ8IYS5 282 aa12.14□□□□□ -0.47
GAPDHP53-201ENST00000458397 IGF1RP08069 1367 aa12.13□□□□□ -0.47
GAPDHP53-201ENST00000458397 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
GAPDHP53-201ENST00000458397 TRIM41Q8WV44 630 aa12.11□□□□□ -0.47
GAPDHP53-201ENST00000458397 GRIN2AQ12879 1464 aa12.09□□□□□ -0.47
GAPDHP53-201ENST00000458397 CLASP1Q7Z460 1538 aa12.09□□□□□ -0.47
GAPDHP53-201ENST00000458397 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
GAPDHP53-201ENST00000458397 CHMP7Q8WUX9 453 aaPredicted RBP12.08□□□□□ -0.48
GAPDHP53-201ENST00000458397 NUP160Q12769 1436 aa12.08□□□□□ -0.48
GAPDHP53-201ENST00000458397 FBLN2P98095 1184 aa12.07□□□□□ -0.48
GAPDHP53-201ENST00000458397 CHIC1Q5VXU3 224 aa12.06□□□□□ -0.48
GAPDHP53-201ENST00000458397 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
GAPDHP53-201ENST00000458397 CUL7Q14999 1698 aa12.04□□□□□ -0.48
GAPDHP53-201ENST00000458397 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.49
GAPDHP53-201ENST00000458397 ARHGEF11O15085 1522 aa12.01□□□□□ -0.49
GAPDHP53-201ENST00000458397 PRXQ9BXM0 1461 aa11.99□□□□□ -0.49
GAPDHP53-201ENST00000458397 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
GAPDHP53-201ENST00000458397 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
GAPDHP53-201ENST00000458397 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
GAPDHP53-201ENST00000458397 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
GAPDHP53-201ENST00000458397 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms