RNA–Protein interactions for RNA: ENST00000456827.5

LIPA-205, Transcript of lipase A, lysosomal acid type, humanhuman

TSL 3 BASIC

Gene LIPA, Length 2,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-205ENST00000456827 NISCHQ9Y2I1 1504 aa33.32■■■□□ 2.92
LIPA-205ENST00000456827 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
LIPA-205ENST00000456827 ABCC9O60706 1549 aa28.1■■■□□ 2.09
LIPA-205ENST00000456827 ZCCHC6Q5VYS8 1495 aaKnown RBP27.9■■■□□ 2.06
LIPA-205ENST00000456827 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
LIPA-205ENST00000456827 MYO15BQ96JP2 1530 aa27.54■■■□□ 2
LIPA-205ENST00000456827 NACADO15069 1562 aa27.48■■□□□ 1.99
LIPA-205ENST00000456827 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
LIPA-205ENST00000456827 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
LIPA-205ENST00000456827 UNC13AQ9UPW8 1703 aa26.89■■□□□ 1.9
LIPA-205ENST00000456827 SCRIBQ14160 1630 aa26.83■■□□□ 1.89
LIPA-205ENST00000456827 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
LIPA-205ENST00000456827 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
LIPA-205ENST00000456827 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
LIPA-205ENST00000456827 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
LIPA-205ENST00000456827 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
LIPA-205ENST00000456827 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
LIPA-205ENST00000456827 SMARCA4P51532 1647 aa25.76■■□□□ 1.72
LIPA-205ENST00000456827 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
LIPA-205ENST00000456827 RSF1Q96T23 1441 aaPredicted RBP25.57■■□□□ 1.68
LIPA-205ENST00000456827 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
LIPA-205ENST00000456827 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
LIPA-205ENST00000456827 WIZO95785 1651 aa25.47■■□□□ 1.67
LIPA-205ENST00000456827 SMARCA2P51531 1590 aa25.43■■□□□ 1.66
LIPA-205ENST00000456827 ATAD2BQ9ULI0 1458 aa25.43■■□□□ 1.66
LIPA-205ENST00000456827 NCAPD3P42695 1498 aa25.32■■□□□ 1.64
LIPA-205ENST00000456827 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
LIPA-205ENST00000456827 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
LIPA-205ENST00000456827 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
LIPA-205ENST00000456827 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
LIPA-205ENST00000456827 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
LIPA-205ENST00000456827 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
LIPA-205ENST00000456827 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
LIPA-205ENST00000456827 CFTRP13569 1480 aa24.59■■□□□ 1.53
LIPA-205ENST00000456827 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
LIPA-205ENST00000456827 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
LIPA-205ENST00000456827 NESP48681 1621 aa24.53■■□□□ 1.52
LIPA-205ENST00000456827 KIF21AQ7Z4S6 1674 aa24.35■■□□□ 1.49
LIPA-205ENST00000456827 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
LIPA-205ENST00000456827 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
LIPA-205ENST00000456827 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
LIPA-205ENST00000456827 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
LIPA-205ENST00000456827 THOC2Q8NI27 1593 aaKnown RBP24.13■■□□□ 1.45
LIPA-205ENST00000456827 ERCC6Q03468 1493 aa24.12■■□□□ 1.45
LIPA-205ENST00000456827 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
LIPA-205ENST00000456827 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.44
LIPA-205ENST00000456827 CUX1P39880 1505 aa24.08■■□□□ 1.44
LIPA-205ENST00000456827 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
LIPA-205ENST00000456827 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
LIPA-205ENST00000456827 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
LIPA-205ENST00000456827 WRNQ14191 1432 aaPredicted RBP eCLIP24.06■■□□□ 1.44
LIPA-205ENST00000456827 WDR62O43379 1518 aa24.04■■□□□ 1.44
LIPA-205ENST00000456827 TOP2BQ02880 1626 aa24.04■■□□□ 1.44
LIPA-205ENST00000456827 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
LIPA-205ENST00000456827 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
LIPA-205ENST00000456827 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
LIPA-205ENST00000456827 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
LIPA-205ENST00000456827 CUX2O14529 1486 aa23.79■■□□□ 1.4
LIPA-205ENST00000456827 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
LIPA-205ENST00000456827 WDR97A6NE52 1622 aa23.78■■□□□ 1.4
LIPA-205ENST00000456827 TARBP1Q13395 1621 aaKnown RBP23.78■■□□□ 1.4
LIPA-205ENST00000456827 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
LIPA-205ENST00000456827 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
LIPA-205ENST00000456827 SOGA1O94964 1423 aa23.69■■□□□ 1.38
LIPA-205ENST00000456827 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
LIPA-205ENST00000456827 ABCA5Q8WWZ7 1642 aa23.6■■□□□ 1.37
LIPA-205ENST00000456827 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
LIPA-205ENST00000456827 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
LIPA-205ENST00000456827 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
LIPA-205ENST00000456827 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
LIPA-205ENST00000456827 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
LIPA-205ENST00000456827 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
LIPA-205ENST00000456827 EEA1Q15075 1411 aa23.46■■□□□ 1.35
LIPA-205ENST00000456827 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
LIPA-205ENST00000456827 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
LIPA-205ENST00000456827 ERICH3Q5RHP9 1530 aa23.41■■□□□ 1.34
LIPA-205ENST00000456827 GRIN2BQ13224 1484 aa23.38■■□□□ 1.33
LIPA-205ENST00000456827 IGF1RP08069 1367 aa23.35■■□□□ 1.33
LIPA-205ENST00000456827 CUL7Q14999 1698 aa23.34■■□□□ 1.33
LIPA-205ENST00000456827 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
LIPA-205ENST00000456827 SNAPC4Q5SXM2 1469 aa23.28■■□□□ 1.32
LIPA-205ENST00000456827 MAGI1Q96QZ7 1491 aaPredicted RBP23.28■■□□□ 1.32
LIPA-205ENST00000456827 CSRNP3Q8WYN3 585 aa23.27■■□□□ 1.32
LIPA-205ENST00000456827 PRXQ9BXM0 1461 aa23.26■■□□□ 1.31
LIPA-205ENST00000456827 KIF21BO75037 1637 aa23.26■■□□□ 1.31
LIPA-205ENST00000456827 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
LIPA-205ENST00000456827 FHAD1B1AJZ9 1412 aa23.21■■□□□ 1.31
LIPA-205ENST00000456827 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
LIPA-205ENST00000456827 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
LIPA-205ENST00000456827 CHD1O14646 1710 aa23.17■■□□□ 1.3
LIPA-205ENST00000456827 RAPGEF2Q9Y4G8 1499 aa23.16■■□□□ 1.3
LIPA-205ENST00000456827 GRIN2AQ12879 1464 aa23.1■■□□□ 1.29
LIPA-205ENST00000456827 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
LIPA-205ENST00000456827 CTTNBP2Q8WZ74 1663 aa23.03■■□□□ 1.28
LIPA-205ENST00000456827 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
LIPA-205ENST00000456827 NUP160Q12769 1436 aa23■■□□□ 1.27
LIPA-205ENST00000456827 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
LIPA-205ENST00000456827 LOC105371045A0A1W2PR82 267 aa22.91■■□□□ 1.26
LIPA-205ENST00000456827 CLASP1Q7Z460 1538 aa22.91■■□□□ 1.26
LIPA-205ENST00000456827 FBLN2P98095 1184 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms