RNA–Protein interactions for RNA: ENST00000456537.5

AC004448.4-203, humanhuman

TSL 3 BASIC

Gene AC004448.4, Length 441 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.4-203ENST00000456537 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
AC004448.4-203ENST00000456537 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
AC004448.4-203ENST00000456537 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
AC004448.4-203ENST00000456537 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
AC004448.4-203ENST00000456537 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
AC004448.4-203ENST00000456537 FOXD1Q16676 465 aa19.47■□□□□ 0.71
AC004448.4-203ENST00000456537 POTEDQ86YR6 584 aa18.94■□□□□ 0.62
AC004448.4-203ENST00000456537 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
AC004448.4-203ENST00000456537 MSH5O43196 834 aa18.61■□□□□ 0.57
AC004448.4-203ENST00000456537 ABCC9O60706 1549 aa18.17■□□□□ 0.5
AC004448.4-203ENST00000456537 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
AC004448.4-203ENST00000456537 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
AC004448.4-203ENST00000456537 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
AC004448.4-203ENST00000456537 ADRA2BP18089 450 aa17.65■□□□□ 0.42
AC004448.4-203ENST00000456537 NACADO15069 1562 aa17.57■□□□□ 0.4
AC004448.4-203ENST00000456537 RB1CC1Q8TDY2 1594 aa17.56■□□□□ 0.4
AC004448.4-203ENST00000456537 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.39
AC004448.4-203ENST00000456537 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
AC004448.4-203ENST00000456537 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.39
AC004448.4-203ENST00000456537 DCAF1Q9Y4B6 1507 aa17.44■□□□□ 0.38
AC004448.4-203ENST00000456537 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
AC004448.4-203ENST00000456537 PABPN1Q86U42 306 aaKnown RBP eCLIP16.99■□□□□ 0.31
AC004448.4-203ENST00000456537 SCRIBQ14160 1630 aa16.95■□□□□ 0.3
AC004448.4-203ENST00000456537 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
AC004448.4-203ENST00000456537 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
AC004448.4-203ENST00000456537 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
AC004448.4-203ENST00000456537 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
AC004448.4-203ENST00000456537 EIF4G1Q04637 1599 aaKnown RBP16.52■□□□□ 0.24
AC004448.4-203ENST00000456537 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
AC004448.4-203ENST00000456537 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
AC004448.4-203ENST00000456537 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
AC004448.4-203ENST00000456537 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
AC004448.4-203ENST00000456537 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
AC004448.4-203ENST00000456537 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
AC004448.4-203ENST00000456537 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
AC004448.4-203ENST00000456537 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
AC004448.4-203ENST00000456537 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
AC004448.4-203ENST00000456537 CACNB1Q02641 598 aaPredicted RBP16.15■□□□□ 0.18
AC004448.4-203ENST00000456537 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
AC004448.4-203ENST00000456537 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
AC004448.4-203ENST00000456537 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
AC004448.4-203ENST00000456537 BAZ1BQ9UIG0 1483 aaKnown RBP16.04■□□□□ 0.16
AC004448.4-203ENST00000456537 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
AC004448.4-203ENST00000456537 WIZO95785 1651 aa15.95■□□□□ 0.14
AC004448.4-203ENST00000456537 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
AC004448.4-203ENST00000456537 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.11
AC004448.4-203ENST00000456537 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
AC004448.4-203ENST00000456537 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
AC004448.4-203ENST00000456537 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
AC004448.4-203ENST00000456537 NESP48681 1621 aa15.72■□□□□ 0.11
AC004448.4-203ENST00000456537 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
AC004448.4-203ENST00000456537 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
AC004448.4-203ENST00000456537 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
AC004448.4-203ENST00000456537 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
AC004448.4-203ENST00000456537 CFTRP13569 1480 aa15.62■□□□□ 0.09
AC004448.4-203ENST00000456537 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.08
AC004448.4-203ENST00000456537 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
AC004448.4-203ENST00000456537 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
AC004448.4-203ENST00000456537 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
AC004448.4-203ENST00000456537 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
AC004448.4-203ENST00000456537 CUX2O14529 1486 aa15.52■□□□□ 0.08
AC004448.4-203ENST00000456537 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
AC004448.4-203ENST00000456537 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
AC004448.4-203ENST00000456537 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
AC004448.4-203ENST00000456537 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
AC004448.4-203ENST00000456537 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
AC004448.4-203ENST00000456537 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
AC004448.4-203ENST00000456537 WDR62O43379 1518 aa15.4■□□□□ 0.06
AC004448.4-203ENST00000456537 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
AC004448.4-203ENST00000456537 URB2Q14146 1524 aaKnown RBP15.31■□□□□ 0.04
AC004448.4-203ENST00000456537 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
AC004448.4-203ENST00000456537 TOPBP1Q92547 1522 aa15.25■□□□□ 0.03
AC004448.4-203ENST00000456537 IFT140Q96RY7 1462 aa15.18■□□□□ 0.02
AC004448.4-203ENST00000456537 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
AC004448.4-203ENST00000456537 CUX1P39880 1505 aa15.13■□□□□ 0.01
AC004448.4-203ENST00000456537 POLA1P09884 1462 aaPredicted RBP15.13■□□□□ 0.01
AC004448.4-203ENST00000456537 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
AC004448.4-203ENST00000456537 TARBP1Q13395 1621 aaKnown RBP15.09■□□□□ 0.01
AC004448.4-203ENST00000456537 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0.01
AC004448.4-203ENST00000456537 SOGA1O94964 1423 aa15.08■□□□□ 0
AC004448.4-203ENST00000456537 WDR97A6NE52 1622 aa15.06■□□□□ 0
AC004448.4-203ENST00000456537 TOP2BQ02880 1626 aa15.06■□□□□ 0
AC004448.4-203ENST00000456537 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
AC004448.4-203ENST00000456537 ZNF608Q9ULD9 1512 aaPredicted RBP15.05■□□□□ -0
AC004448.4-203ENST00000456537 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
AC004448.4-203ENST00000456537 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
AC004448.4-203ENST00000456537 SYNJ1O43426 1573 aa15□□□□□ -0.01
AC004448.4-203ENST00000456537 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
AC004448.4-203ENST00000456537 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
AC004448.4-203ENST00000456537 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
AC004448.4-203ENST00000456537 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
AC004448.4-203ENST00000456537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
AC004448.4-203ENST00000456537 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
AC004448.4-203ENST00000456537 GAPVD1Q14C86 1478 aa14.91□□□□□ -0.02
AC004448.4-203ENST00000456537 MAGI1Q96QZ7 1491 aaPredicted RBP14.89□□□□□ -0.03
AC004448.4-203ENST00000456537 ABCA5Q8WWZ7 1642 aa14.89□□□□□ -0.03
AC004448.4-203ENST00000456537 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
AC004448.4-203ENST00000456537 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
AC004448.4-203ENST00000456537 SNAPC4Q5SXM2 1469 aa14.83□□□□□ -0.03
AC004448.4-203ENST00000456537 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms