RNA–Protein interactions for RNA: ENST00000456468.1

NDUFAF4P3-201, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 3, humanhuman

BASIC

Gene NDUFAF4P3, Length 525 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF4P3-201ENST00000456468 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
NDUFAF4P3-201ENST00000456468 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
NDUFAF4P3-201ENST00000456468 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
NDUFAF4P3-201ENST00000456468 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
NDUFAF4P3-201ENST00000456468 FOXD1Q16676 465 aa15.15■□□□□ 0.02
NDUFAF4P3-201ENST00000456468 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
NDUFAF4P3-201ENST00000456468 MSH5O43196 834 aa14.33□□□□□ -0.12
NDUFAF4P3-201ENST00000456468 PIAS4Q8N2W9 510 aaPredicted RBP14.18□□□□□ -0.14
NDUFAF4P3-201ENST00000456468 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
NDUFAF4P3-201ENST00000456468 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
NDUFAF4P3-201ENST00000456468 ADRA2BP18089 450 aa14.02□□□□□ -0.17
NDUFAF4P3-201ENST00000456468 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
NDUFAF4P3-201ENST00000456468 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
NDUFAF4P3-201ENST00000456468 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
NDUFAF4P3-201ENST00000456468 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
NDUFAF4P3-201ENST00000456468 DNAJC5Q9H3Z4 198 aa12.65□□□□□ -0.38
NDUFAF4P3-201ENST00000456468 PPP4R3CPQ6ZMV5 832 aa12.57□□□□□ -0.4
NDUFAF4P3-201ENST00000456468 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
NDUFAF4P3-201ENST00000456468 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.42
NDUFAF4P3-201ENST00000456468 ABCC9O60706 1549 aa12.39□□□□□ -0.43
NDUFAF4P3-201ENST00000456468 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
NDUFAF4P3-201ENST00000456468 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
NDUFAF4P3-201ENST00000456468 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
NDUFAF4P3-201ENST00000456468 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
NDUFAF4P3-201ENST00000456468 RNF39Q9H2S5 420 aa12.15□□□□□ -0.46
NDUFAF4P3-201ENST00000456468 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
NDUFAF4P3-201ENST00000456468 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
NDUFAF4P3-201ENST00000456468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.85□□□□□ -0.51
NDUFAF4P3-201ENST00000456468 NISCHQ9Y2I1 1504 aa11.84□□□□□ -0.51
NDUFAF4P3-201ENST00000456468 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
NDUFAF4P3-201ENST00000456468 KCNA4P22459 653 aa11.52□□□□□ -0.57
NDUFAF4P3-201ENST00000456468 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
NDUFAF4P3-201ENST00000456468 CAPN15O75808 1086 aa11.42□□□□□ -0.58
NDUFAF4P3-201ENST00000456468 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
NDUFAF4P3-201ENST00000456468 APLP2Q06481 763 aa11.39□□□□□ -0.59
NDUFAF4P3-201ENST00000456468 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
NDUFAF4P3-201ENST00000456468 DSG3P32926 999 aa11.33□□□□□ -0.6
NDUFAF4P3-201ENST00000456468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
NDUFAF4P3-201ENST00000456468 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
NDUFAF4P3-201ENST00000456468 SLC4A2P04920 1241 aa11.31□□□□□ -0.6
NDUFAF4P3-201ENST00000456468 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.6
NDUFAF4P3-201ENST00000456468 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
NDUFAF4P3-201ENST00000456468 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.61
NDUFAF4P3-201ENST00000456468 TRHP20396 242 aaPredicted RBP11.2□□□□□ -0.62
NDUFAF4P3-201ENST00000456468 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
NDUFAF4P3-201ENST00000456468 CUX2O14529 1486 aa11.12□□□□□ -0.63
NDUFAF4P3-201ENST00000456468 ILDR1Q86SU0 546 aaPredicted RBP11.12□□□□□ -0.63
NDUFAF4P3-201ENST00000456468 ABCB7O75027 752 aa11.08□□□□□ -0.64
NDUFAF4P3-201ENST00000456468 CC2D2AQ9P2K1 1620 aa11.07□□□□□ -0.64
NDUFAF4P3-201ENST00000456468 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
NDUFAF4P3-201ENST00000456468 CCDC180Q9P1Z9 1646 aa11.02□□□□□ -0.65
NDUFAF4P3-201ENST00000456468 POTEHQ6S545 545 aa11.01□□□□□ -0.65
NDUFAF4P3-201ENST00000456468 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
NDUFAF4P3-201ENST00000456468 SLC4A1APQ9BWU0 796 aaKnown RBP10.93□□□□□ -0.66
NDUFAF4P3-201ENST00000456468 POLA2Q14181 598 aa10.88□□□□□ -0.67
NDUFAF4P3-201ENST00000456468 UNC13AQ9UPW8 1703 aa10.87□□□□□ -0.67
NDUFAF4P3-201ENST00000456468 BICRAQ9NZM4 1560 aa10.86□□□□□ -0.67
NDUFAF4P3-201ENST00000456468 FOXD4L1Q9NU39 408 aa10.85□□□□□ -0.67
NDUFAF4P3-201ENST00000456468 ERCC6Q03468 1493 aa10.8□□□□□ -0.68
NDUFAF4P3-201ENST00000456468 NACADO15069 1562 aa10.77□□□□□ -0.68
NDUFAF4P3-201ENST00000456468 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
NDUFAF4P3-201ENST00000456468 DCAF8L2P0C7V8 631 aa10.73□□□□□ -0.69
NDUFAF4P3-201ENST00000456468 EIF4G1Q04637 1599 aaKnown RBP10.72□□□□□ -0.69
NDUFAF4P3-201ENST00000456468 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
NDUFAF4P3-201ENST00000456468 ATF5Q9Y2D1 282 aaPredicted RBP10.65□□□□□ -0.7
NDUFAF4P3-201ENST00000456468 AKT1S1Q96B36 256 aa10.62□□□□□ -0.71
NDUFAF4P3-201ENST00000456468 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
NDUFAF4P3-201ENST00000456468 OSCARQ8IYS5 282 aa10.55□□□□□ -0.72
NDUFAF4P3-201ENST00000456468 ZBTB22O15209 634 aa10.53□□□□□ -0.72
NDUFAF4P3-201ENST00000456468 SHROOM4Q9ULL8 1493 aa10.53□□□□□ -0.72
NDUFAF4P3-201ENST00000456468 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
NDUFAF4P3-201ENST00000456468 SOCS7O14512 581 aa10.43□□□□□ -0.74
NDUFAF4P3-201ENST00000456468 FBLN2P98095 1184 aa10.43□□□□□ -0.74
NDUFAF4P3-201ENST00000456468 RIMBP3CA6NJZ7 1639 aa10.43□□□□□ -0.74
NDUFAF4P3-201ENST00000456468 RIMBP3BA6NNM3 1639 aa10.43□□□□□ -0.74
NDUFAF4P3-201ENST00000456468 RIMBP3Q9UFD9 1639 aa10.43□□□□□ -0.74
NDUFAF4P3-201ENST00000456468 CYB5RLQ6IPT4 315 aa10.42□□□□□ -0.74
NDUFAF4P3-201ENST00000456468 LMTK3Q96Q04 1460 aa10.4□□□□□ -0.74
NDUFAF4P3-201ENST00000456468 SPDYE2BA6NHP3 402 aa10.36□□□□□ -0.75
NDUFAF4P3-201ENST00000456468 SPDYE6P0CI01 402 aa10.36□□□□□ -0.75
NDUFAF4P3-201ENST00000456468 SPDYE2Q495Y8 402 aa10.36□□□□□ -0.75
NDUFAF4P3-201ENST00000456468 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
NDUFAF4P3-201ENST00000456468 PIP4P2Q8N4L2 257 aa10.34□□□□□ -0.75
NDUFAF4P3-201ENST00000456468 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
NDUFAF4P3-201ENST00000456468 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
NDUFAF4P3-201ENST00000456468 ILDR2Q71H61 639 aa10.29□□□□□ -0.76
NDUFAF4P3-201ENST00000456468 SP7Q8TDD2 431 aaPredicted RBP10.29□□□□□ -0.76
NDUFAF4P3-201ENST00000456468 FBXO41Q8TF61 875 aa10.29□□□□□ -0.76
NDUFAF4P3-201ENST00000456468 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
NDUFAF4P3-201ENST00000456468 NESP48681 1621 aa10.27□□□□□ -0.77
NDUFAF4P3-201ENST00000456468 ARHGEF11O15085 1522 aa10.27□□□□□ -0.77
NDUFAF4P3-201ENST00000456468 HAX1O00165 279 aa10.24□□□□□ -0.77
NDUFAF4P3-201ENST00000456468 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
NDUFAF4P3-201ENST00000456468 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.77
NDUFAF4P3-201ENST00000456468 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
NDUFAF4P3-201ENST00000456468 MKRN4PQ13434 485 aaPredicted RBP10.18□□□□□ -0.78
NDUFAF4P3-201ENST00000456468 SCRIBQ14160 1630 aa10.16□□□□□ -0.78
NDUFAF4P3-201ENST00000456468 CLEC11AQ9Y240 323 aa10.16□□□□□ -0.78
NDUFAF4P3-201ENST00000456468 SSUH2Q9Y2M2 353 aa10.15□□□□□ -0.78
NDUFAF4P3-201ENST00000456468 MYO15BQ96JP2 1530 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms