RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 NISCHQ9Y2I1 1504 aa45.14■■■■■ 4.82
SBDSP1-205ENST00000456312 CCDC180Q9P1Z9 1646 aa40.09■■■■■ 4.01
SBDSP1-205ENST00000456312 ABCC9O60706 1549 aa38.64■■■■□ 3.78
SBDSP1-205ENST00000456312 ZCCHC6Q5VYS8 1495 aaKnown RBP37.72■■■■□ 3.63
SBDSP1-205ENST00000456312 NACADO15069 1562 aa37.5■■■■□ 3.59
SBDSP1-205ENST00000456312 MYO15BQ96JP2 1530 aa37.46■■■■□ 3.59
SBDSP1-205ENST00000456312 DCAF1Q9Y4B6 1507 aa37.44■■■■□ 3.58
SBDSP1-205ENST00000456312 RB1CC1Q8TDY2 1594 aa37.42■■■■□ 3.58
SBDSP1-205ENST00000456312 DCAF8L2P0C7V8 631 aa37.18■■■■□ 3.54
SBDSP1-205ENST00000456312 UNC13AQ9UPW8 1703 aa36.82■■■■□ 3.49
SBDSP1-205ENST00000456312 SCRIBQ14160 1630 aa36.47■■■■□ 3.43
SBDSP1-205ENST00000456312 BICRAQ9NZM4 1560 aa36.4■■■■□ 3.42
SBDSP1-205ENST00000456312 PABPN1Q86U42 306 aaKnown RBP eCLIP36.08■■■■□ 3.37
SBDSP1-205ENST00000456312 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
SBDSP1-205ENST00000456312 EIF4G1Q04637 1599 aaKnown RBP35.33■■■■□ 3.25
SBDSP1-205ENST00000456312 DNAJC5BQ9UF47 199 aa35.16■■■■□ 3.22
SBDSP1-205ENST00000456312 CECR2Q9BXF3 1484 aa35.11■■■■□ 3.21
SBDSP1-205ENST00000456312 CC2D2AQ9P2K1 1620 aa35.09■■■■□ 3.21
SBDSP1-205ENST00000456312 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
SBDSP1-205ENST00000456312 BAZ1AQ9NRL2 1556 aaPredicted RBP34.94■■■■□ 3.18
SBDSP1-205ENST00000456312 MROH2BQ7Z745 1585 aa34.8■■■■□ 3.16
SBDSP1-205ENST00000456312 PEG3Q9GZU2 1588 aa34.7■■■■□ 3.15
SBDSP1-205ENST00000456312 ATAD2BQ9ULI0 1458 aa34.64■■■■□ 3.14
SBDSP1-205ENST00000456312 SMARCA2P51531 1590 aa34.61■■■■□ 3.13
SBDSP1-205ENST00000456312 NCAPD3P42695 1498 aa34.57■■■■□ 3.12
SBDSP1-205ENST00000456312 HMGXB3Q12766 1538 aa34.5■■■■□ 3.11
SBDSP1-205ENST00000456312 RSF1Q96T23 1441 aaPredicted RBP34.48■■■■□ 3.11
SBDSP1-205ENST00000456312 WIZO95785 1651 aa34.48■■■■□ 3.11
SBDSP1-205ENST00000456312 BAZ1BQ9UIG0 1483 aaKnown RBP34.32■■■■□ 3.08
SBDSP1-205ENST00000456312 TOP2AP11388 1531 aaKnown RBP34.11■■■■□ 3.05
SBDSP1-205ENST00000456312 CCDC88BA6NC98 1476 aa33.65■■■□□ 2.98
SBDSP1-205ENST00000456312 SUPT5HO00267 1087 aaKnown RBP33.64■■■□□ 2.98
SBDSP1-205ENST00000456312 LAMC3Q9Y6N6 1575 aa33.63■■■□□ 2.97
SBDSP1-205ENST00000456312 NESP48681 1621 aa33.61■■■□□ 2.97
SBDSP1-205ENST00000456312 CADPSQ9ULU8 1353 aa33.51■■■□□ 2.96
SBDSP1-205ENST00000456312 CFTRP13569 1480 aa33.46■■■□□ 2.95
SBDSP1-205ENST00000456312 PRDM2Q13029 1718 aa33.45■■■□□ 2.95
SBDSP1-205ENST00000456312 KIF21AQ7Z4S6 1674 aa33.36■■■□□ 2.93
SBDSP1-205ENST00000456312 PDS5BQ9NTI5 1447 aa33.25■■■□□ 2.91
SBDSP1-205ENST00000456312 ERCC6Q03468 1493 aa33.2■■■□□ 2.91
SBDSP1-205ENST00000456312 THOC2Q8NI27 1593 aaKnown RBP33.15■■■□□ 2.9
SBDSP1-205ENST00000456312 FANCD2Q9BXW9 1451 aa33.14■■■□□ 2.9
SBDSP1-205ENST00000456312 CEP164Q9UPV0 1460 aa33.06■■■□□ 2.88
SBDSP1-205ENST00000456312 MRC2Q9UBG0 1479 aa32.96■■■□□ 2.87
SBDSP1-205ENST00000456312 WDR62O43379 1518 aa32.93■■■□□ 2.86
SBDSP1-205ENST00000456312 URB2Q14146 1524 aaKnown RBP32.86■■■□□ 2.85
SBDSP1-205ENST00000456312 CUX2O14529 1486 aa32.85■■■□□ 2.85
SBDSP1-205ENST00000456312 DNMBPQ6XZF7 1577 aa32.72■■■□□ 2.83
SBDSP1-205ENST00000456312 TOPBP1Q92547 1522 aa32.71■■■□□ 2.83
SBDSP1-205ENST00000456312 ABCC8Q09428 1581 aa32.67■■■□□ 2.82
SBDSP1-205ENST00000456312 CUX1P39880 1505 aa32.62■■■□□ 2.81
SBDSP1-205ENST00000456312 BIVM-ERCC5R4GMW8 1640 aa32.52■■■□□ 2.8
SBDSP1-205ENST00000456312 SYNJ1O43426 1573 aa32.49■■■□□ 2.79
SBDSP1-205ENST00000456312 TOP2BQ02880 1626 aa32.47■■■□□ 2.79
SBDSP1-205ENST00000456312 POLA1P09884 1462 aaPredicted RBP32.46■■■□□ 2.79
SBDSP1-205ENST00000456312 WRNQ14191 1432 aaPredicted RBP eCLIP32.45■■■□□ 2.79
SBDSP1-205ENST00000456312 TARBP1Q13395 1621 aaKnown RBP32.41■■■□□ 2.78
SBDSP1-205ENST00000456312 FGD5Q6ZNL6 1462 aa32.41■■■□□ 2.78
SBDSP1-205ENST00000456312 IFT140Q96RY7 1462 aa32.36■■■□□ 2.77
SBDSP1-205ENST00000456312 WDR97A6NE52 1622 aa32.33■■■□□ 2.77
SBDSP1-205ENST00000456312 RAD54L2Q9Y4B4 1467 aa32.26■■■□□ 2.75
SBDSP1-205ENST00000456312 ZNF608Q9ULD9 1512 aaPredicted RBP32.22■■■□□ 2.75
SBDSP1-205ENST00000456312 SOGA1O94964 1423 aa32.22■■■□□ 2.75
SBDSP1-205ENST00000456312 EIF4G3O43432 1585 aaKnown RBP32.18■■■□□ 2.74
SBDSP1-205ENST00000456312 ABCA10Q8WWZ4 1543 aa32.15■■■□□ 2.74
SBDSP1-205ENST00000456312 ABCA5Q8WWZ7 1642 aa32.08■■■□□ 2.73
SBDSP1-205ENST00000456312 AQRO60306 1485 aaKnown RBP eCLIP32.03■■■□□ 2.72
SBDSP1-205ENST00000456312 TDRD9Q8NDG6 1382 aaKnown RBP31.98■■■□□ 2.71
SBDSP1-205ENST00000456312 PBRM1Q86U86 1689 aa31.98■■■□□ 2.71
SBDSP1-205ENST00000456312 DNAJC5Q9H3Z4 198 aa31.96■■■□□ 2.71
SBDSP1-205ENST00000456312 GAPVD1Q14C86 1478 aa31.9■■■□□ 2.7
SBDSP1-205ENST00000456312 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
SBDSP1-205ENST00000456312 ERICH3Q5RHP9 1530 aa31.77■■■□□ 2.68
SBDSP1-205ENST00000456312 SNAPC4Q5SXM2 1469 aa31.77■■■□□ 2.68
SBDSP1-205ENST00000456312 MAGI1Q96QZ7 1491 aaPredicted RBP31.77■■■□□ 2.68
SBDSP1-205ENST00000456312 TRIM41Q8WV44 630 aa31.76■■■□□ 2.67
SBDSP1-205ENST00000456312 CHD1O14646 1710 aa31.75■■■□□ 2.67
SBDSP1-205ENST00000456312 CHIC1Q5VXU3 224 aa31.73■■■□□ 2.67
SBDSP1-205ENST00000456312 KIF27Q86VH2 1401 aa31.71■■■□□ 2.67
SBDSP1-205ENST00000456312 ADAMTS12P58397 1594 aa31.7■■■□□ 2.67
SBDSP1-205ENST00000456312 RUSC2Q8N2Y8 1516 aa31.64■■■□□ 2.66
SBDSP1-205ENST00000456312 SYNJ2O15056 1496 aa31.62■■■□□ 2.65
SBDSP1-205ENST00000456312 CUL7Q14999 1698 aa31.58■■■□□ 2.65
SBDSP1-205ENST00000456312 IGF1RP08069 1367 aa31.57■■■□□ 2.64
SBDSP1-205ENST00000456312 FHAD1B1AJZ9 1412 aa31.54■■■□□ 2.64
SBDSP1-205ENST00000456312 GRIN2AQ12879 1464 aa31.48■■■□□ 2.63
SBDSP1-205ENST00000456312 OSCARQ8IYS5 282 aa31.39■■■□□ 2.62
SBDSP1-205ENST00000456312 CHMP7Q8WUX9 453 aaPredicted RBP31.39■■■□□ 2.62
SBDSP1-205ENST00000456312 CLASP1Q7Z460 1538 aa31.39■■■□□ 2.61
SBDSP1-205ENST00000456312 EEA1Q15075 1411 aa31.38■■■□□ 2.61
SBDSP1-205ENST00000456312 CEP170Q5SW79 1584 aa31.38■■■□□ 2.61
SBDSP1-205ENST00000456312 NUP160Q12769 1436 aa31.36■■■□□ 2.61
SBDSP1-205ENST00000456312 CARMIL1Q5VZK9 1371 aa31.35■■■□□ 2.61
SBDSP1-205ENST00000456312 FBLN2P98095 1184 aa31.35■■■□□ 2.61
SBDSP1-205ENST00000456312 PRXQ9BXM0 1461 aa31.31■■■□□ 2.6
SBDSP1-205ENST00000456312 RAPGEF2Q9Y4G8 1499 aa31.25■■■□□ 2.59
SBDSP1-205ENST00000456312 CSRNP3Q8WYN3 585 aa31.19■■■□□ 2.58
SBDSP1-205ENST00000456312 SHROOM2Q13796 1616 aa31.18■■■□□ 2.58
SBDSP1-205ENST00000456312 KIF21BO75037 1637 aa31.15■■■□□ 2.58
SBDSP1-205ENST00000456312 CTTNBP2Q8WZ74 1663 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms