RNA–Protein interactions for RNA: ENST00000456095.6

PUF60-204, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5 BASIC

Gene PUF60, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-204ENST00000456095 NISCHQ9Y2I1 1504 aa31.24■■■□□ 2.59
PUF60-204ENST00000456095 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
PUF60-204ENST00000456095 ABCC9O60706 1549 aa27.54■■■□□ 2
PUF60-204ENST00000456095 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
PUF60-204ENST00000456095 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
PUF60-204ENST00000456095 NACADO15069 1562 aa26.28■■□□□ 1.8
PUF60-204ENST00000456095 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
PUF60-204ENST00000456095 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
PUF60-204ENST00000456095 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
PUF60-204ENST00000456095 PABPN1Q86U42 306 aaKnown RBP eCLIP25.76■■□□□ 1.713e-7■■■□□ 16.4
PUF60-204ENST00000456095 UNC13AQ9UPW8 1703 aa25.7■■□□□ 1.7
PUF60-204ENST00000456095 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
PUF60-204ENST00000456095 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
PUF60-204ENST00000456095 SCRIBQ14160 1630 aa25.38■■□□□ 1.65
PUF60-204ENST00000456095 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
PUF60-204ENST00000456095 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
PUF60-204ENST00000456095 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
PUF60-204ENST00000456095 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
PUF60-204ENST00000456095 NCAPD3P42695 1498 aa24.28■■□□□ 1.48
PUF60-204ENST00000456095 SMARCA4P51532 1647 aa24.26■■□□□ 1.47
PUF60-204ENST00000456095 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
PUF60-204ENST00000456095 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
PUF60-204ENST00000456095 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
PUF60-204ENST00000456095 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
PUF60-204ENST00000456095 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
PUF60-204ENST00000456095 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
PUF60-204ENST00000456095 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
PUF60-204ENST00000456095 ERCC6Q03468 1493 aa23.77■■□□□ 1.4
PUF60-204ENST00000456095 WIZO95785 1651 aa23.77■■□□□ 1.4
PUF60-204ENST00000456095 NESP48681 1621 aa23.75■■□□□ 1.39
PUF60-204ENST00000456095 RSF1Q96T23 1441 aaPredicted RBP23.72■■□□□ 1.39
PUF60-204ENST00000456095 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.38
PUF60-204ENST00000456095 CUX2O14529 1486 aa23.6■■□□□ 1.37
PUF60-204ENST00000456095 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.37
PUF60-204ENST00000456095 PDS5BQ9NTI5 1447 aa23.56■■□□□ 1.36
PUF60-204ENST00000456095 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
PUF60-204ENST00000456095 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
PUF60-204ENST00000456095 THOC2Q8NI27 1593 aaKnown RBP23.38■■□□□ 1.33
PUF60-204ENST00000456095 CFTRP13569 1480 aa23.35■■□□□ 1.33
PUF60-204ENST00000456095 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
PUF60-204ENST00000456095 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
PUF60-204ENST00000456095 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
PUF60-204ENST00000456095 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
PUF60-204ENST00000456095 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
PUF60-204ENST00000456095 WDR62O43379 1518 aa23.18■■□□□ 1.3
PUF60-204ENST00000456095 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
PUF60-204ENST00000456095 PRDM2Q13029 1718 aa23.06■■□□□ 1.28
PUF60-204ENST00000456095 URB2Q14146 1524 aaKnown RBP23.04■■□□□ 1.28
PUF60-204ENST00000456095 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
PUF60-204ENST00000456095 TOPBP1Q92547 1522 aa22.86■■□□□ 1.25
PUF60-204ENST00000456095 IFT140Q96RY7 1462 aa22.8■■□□□ 1.24
PUF60-204ENST00000456095 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
PUF60-204ENST00000456095 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
PUF60-204ENST00000456095 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
PUF60-204ENST00000456095 POLA1P09884 1462 aaPredicted RBP22.64■■□□□ 1.22
PUF60-204ENST00000456095 SOGA1O94964 1423 aa22.61■■□□□ 1.21
PUF60-204ENST00000456095 TARBP1Q13395 1621 aaKnown RBP22.61■■□□□ 1.21
PUF60-204ENST00000456095 CUX1P39880 1505 aa22.58■■□□□ 1.21
PUF60-204ENST00000456095 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.218e-7■■■■■ 58
PUF60-204ENST00000456095 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
PUF60-204ENST00000456095 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
PUF60-204ENST00000456095 EIF4G3O43432 1585 aaKnown RBP22.55■■□□□ 1.2
PUF60-204ENST00000456095 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
PUF60-204ENST00000456095 FBLN2P98095 1184 aa22.43■■□□□ 1.18
PUF60-204ENST00000456095 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
PUF60-204ENST00000456095 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
PUF60-204ENST00000456095 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
PUF60-204ENST00000456095 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
PUF60-204ENST00000456095 ABCA10Q8WWZ4 1543 aa22.33■■□□□ 1.17
PUF60-204ENST00000456095 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.17
PUF60-204ENST00000456095 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
PUF60-204ENST00000456095 SNAPC4Q5SXM2 1469 aa22.32■■□□□ 1.16
PUF60-204ENST00000456095 CHD1O14646 1710 aa22.32■■□□□ 1.16
PUF60-204ENST00000456095 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
PUF60-204ENST00000456095 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
PUF60-204ENST00000456095 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
PUF60-204ENST00000456095 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
PUF60-204ENST00000456095 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
PUF60-204ENST00000456095 RIMBP3CA6NJZ7 1639 aa22.21■■□□□ 1.15
PUF60-204ENST00000456095 RIMBP3BA6NNM3 1639 aa22.21■■□□□ 1.15
PUF60-204ENST00000456095 ABCA5Q8WWZ7 1642 aa22.21■■□□□ 1.15
PUF60-204ENST00000456095 RIMBP3Q9UFD9 1639 aa22.21■■□□□ 1.15
PUF60-204ENST00000456095 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
PUF60-204ENST00000456095 PBRM1Q86U86 1689 aa22.2■■□□□ 1.14
PUF60-204ENST00000456095 CYB5RLQ6IPT4 315 aa22.11■■□□□ 1.13
PUF60-204ENST00000456095 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.13
PUF60-204ENST00000456095 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
PUF60-204ENST00000456095 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
PUF60-204ENST00000456095 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
PUF60-204ENST00000456095 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
PUF60-204ENST00000456095 ARAP1Q96P48 1450 aa22■■□□□ 1.11
PUF60-204ENST00000456095 NUP160Q12769 1436 aa21.95■■□□□ 1.1
PUF60-204ENST00000456095 KIF27Q86VH2 1401 aa21.95■■□□□ 1.1
PUF60-204ENST00000456095 IGF1RP08069 1367 aa21.92■■□□□ 1.1
PUF60-204ENST00000456095 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
PUF60-204ENST00000456095 JPH4Q96JJ6 628 aa21.83■■□□□ 1.08
PUF60-204ENST00000456095 CARMIL1Q5VZK9 1371 aa21.78■■□□□ 1.08
PUF60-204ENST00000456095 CUL7Q14999 1698 aa21.78■■□□□ 1.08
PUF60-204ENST00000456095 SHROOM2Q13796 1616 aa21.77■■□□□ 1.08
PUF60-204ENST00000456095 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms