RNA–Protein interactions for RNA: ENST00000455840.1

RPL39P39-201, Transcript of ribosomal protein L39 pseudogene 39, humanhuman

BASIC

Gene RPL39P39, Length 151 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P39-201ENST00000455840 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
RPL39P39-201ENST00000455840 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
RPL39P39-201ENST00000455840 POTEDQ86YR6 584 aa11.86□□□□□ -0.51
RPL39P39-201ENST00000455840 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
RPL39P39-201ENST00000455840 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
RPL39P39-201ENST00000455840 FOXD1Q16676 465 aa11.02□□□□□ -0.65
RPL39P39-201ENST00000455840 MSH5O43196 834 aa10.67□□□□□ -0.7
RPL39P39-201ENST00000455840 PIAS4Q8N2W9 510 aaPredicted RBP10.06□□□□□ -0.8
RPL39P39-201ENST00000455840 CACNB1Q02641 598 aaPredicted RBP9.66□□□□□ -0.86
RPL39P39-201ENST00000455840 PPP6R1Q9UPN7 881 aa9.64□□□□□ -0.87
RPL39P39-201ENST00000455840 ADRA2BP18089 450 aa9.54□□□□□ -0.88
RPL39P39-201ENST00000455840 PLPPR3Q6T4P5 718 aa9.23□□□□□ -0.93
RPL39P39-201ENST00000455840 DMRT2Q9Y5R5 561 aa9.17□□□□□ -0.94
RPL39P39-201ENST00000455840 POTEHQ6S545 545 aa9.13□□□□□ -0.95
RPL39P39-201ENST00000455840 MAPK8IP2Q13387 824 aaPredicted RBP9.03□□□□□ -0.96
RPL39P39-201ENST00000455840 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
RPL39P39-201ENST00000455840 C1QBPQ07021 282 aaKnown RBP8.86□□□□□ -0.99
RPL39P39-201ENST00000455840 SCAF1Q9H7N4 1312 aaKnown RBP8.78□□□□□ -1
RPL39P39-201ENST00000455840 DCAF8L1A6NGE4 600 aa8.77□□□□□ -1.01
RPL39P39-201ENST00000455840 HOXD11P31277 338 aaPredicted RBP8.5□□□□□ -1.05
RPL39P39-201ENST00000455840 DNAJC5BQ9UF47 199 aa8.43□□□□□ -1.06
RPL39P39-201ENST00000455840 RNF216Q9NWF9 866 aaPredicted RBP8.2□□□□□ -1.1
RPL39P39-201ENST00000455840 SP7Q8TDD2 431 aaPredicted RBP8.15□□□□□ -1.1
RPL39P39-201ENST00000455840 DSG3P32926 999 aa8.14□□□□□ -1.11
RPL39P39-201ENST00000455840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.07□□□□□ -1.12
RPL39P39-201ENST00000455840 CNKSR2Q8WXI2 1034 aa8.04□□□□□ -1.12
RPL39P39-201ENST00000455840 PPP4R3CPQ6ZMV5 832 aa7.98□□□□□ -1.13
RPL39P39-201ENST00000455840 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
RPL39P39-201ENST00000455840 CAPN15O75808 1086 aa7.96□□□□□ -1.14
RPL39P39-201ENST00000455840 SPINK5Q9NQ38 1064 aaPredicted RBP7.93□□□□□ -1.14
RPL39P39-201ENST00000455840 PLSCR2Q9NRY7 297 aa7.85□□□□□ -1.15
RPL39P39-201ENST00000455840 RBM42Q9BTD8 480 aaKnown RBP7.8□□□□□ -1.16
RPL39P39-201ENST00000455840 U3KPZ7 1027 aaPredicted RBP7.79□□□□□ -1.16
RPL39P39-201ENST00000455840 HAX1O00165 279 aa7.68□□□□□ -1.18
RPL39P39-201ENST00000455840 ABCB7O75027 752 aa7.67□□□□□ -1.18
RPL39P39-201ENST00000455840 LHX8Q68G74 356 aa7.63□□□□□ -1.19
RPL39P39-201ENST00000455840 TRHP20396 242 aaPredicted RBP7.62□□□□□ -1.19
RPL39P39-201ENST00000455840 PIP4P2Q8N4L2 257 aa7.59□□□□□ -1.19
RPL39P39-201ENST00000455840 ZNF219Q9P2Y4 722 aaPredicted RBP7.59□□□□□ -1.19
RPL39P39-201ENST00000455840 EVX2Q03828 476 aa7.52□□□□□ -1.21
RPL39P39-201ENST00000455840 APLP2Q06481 763 aa7.51□□□□□ -1.21
RPL39P39-201ENST00000455840 AKT1S1Q96B36 256 aa7.44□□□□□ -1.22
RPL39P39-201ENST00000455840 NCBP3Q53F19 620 aaKnown RBP7.43□□□□□ -1.22
RPL39P39-201ENST00000455840 FXR2P51116 673 aaKnown RBP eCLIP7.42□□□□□ -1.22
RPL39P39-201ENST00000455840 REM2Q8IYK8 340 aaPredicted RBP7.37□□□□□ -1.23
RPL39P39-201ENST00000455840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
RPL39P39-201ENST00000455840 GABBR2O75899 941 aa7.31□□□□□ -1.24
RPL39P39-201ENST00000455840 HNRNPUL2Q1KMD3 747 aaKnown RBP7.31□□□□□ -1.24
RPL39P39-201ENST00000455840 NPM3O75607 178 aaKnown RBP7.29□□□□□ -1.24
RPL39P39-201ENST00000455840 PITPNM1O00562 1244 aa7.28□□□□□ -1.24
RPL39P39-201ENST00000455840 POLA2Q14181 598 aa7.24□□□□□ -1.25
RPL39P39-201ENST00000455840 POTEMA6NI47 508 aa7.22□□□□□ -1.25
RPL39P39-201ENST00000455840 SAMD1Q6SPF0 538 aaPredicted RBP7.22□□□□□ -1.25
RPL39P39-201ENST00000455840 PCDH10Q9P2E7 1040 aa7.22□□□□□ -1.25
RPL39P39-201ENST00000455840 C19orf67A6NJJ6 358 aa7.21□□□□□ -1.26
RPL39P39-201ENST00000455840 SLC4A2P04920 1241 aa7.2□□□□□ -1.26
RPL39P39-201ENST00000455840 POTEGQ6S5H5 508 aa7.17□□□□□ -1.26
RPL39P39-201ENST00000455840 POTEIP0CG38 1075 aa7.14□□□□□ -1.27
RPL39P39-201ENST00000455840 PRKAR2AP13861 404 aaKnown RBP7.08□□□□□ -1.28
RPL39P39-201ENST00000455840 OTUD5Q96G74 571 aa7.05□□□□□ -1.28
RPL39P39-201ENST00000455840 ZBTB12Q9Y330 459 aaPredicted RBP7.05□□□□□ -1.28
RPL39P39-201ENST00000455840 OSCARQ8IYS5 282 aa7.01□□□□□ -1.29
RPL39P39-201ENST00000455840 CLCN6P51797 869 aa6.96□□□□□ -1.3
RPL39P39-201ENST00000455840 DCBLD2Q96PD2 775 aa6.92□□□□□ -1.3
RPL39P39-201ENST00000455840 POTEB2H3BUK9 544 aa6.88□□□□□ -1.31
RPL39P39-201ENST00000455840 SPDYE1Q8NFV5 336 aaPredicted RBP6.85□□□□□ -1.31
RPL39P39-201ENST00000455840 CLEC11AQ9Y240 323 aa6.83□□□□□ -1.32
RPL39P39-201ENST00000455840 LCE2DQ5TA82 110 aaPredicted RBP6.82□□□□□ -1.32
RPL39P39-201ENST00000455840 CD44P16070 742 aaKnown RBP6.8□□□□□ -1.32
RPL39P39-201ENST00000455840 CHADLQ6NUI6 762 aa6.78□□□□□ -1.32
RPL39P39-201ENST00000455840 MYCNP04198 464 aaPredicted RBP6.77□□□□□ -1.33
RPL39P39-201ENST00000455840 SPDYE2BA6NHP3 402 aa6.75□□□□□ -1.33
RPL39P39-201ENST00000455840 SPDYE6P0CI01 402 aa6.75□□□□□ -1.33
RPL39P39-201ENST00000455840 SPDYE2Q495Y8 402 aa6.75□□□□□ -1.33
RPL39P39-201ENST00000455840 FAM163AQ96GL9 167 aaPredicted RBP6.75□□□□□ -1.33
RPL39P39-201ENST00000455840 CDAN1Q8IWY9 1227 aa6.72□□□□□ -1.33
RPL39P39-201ENST00000455840 MAMSTRQ6ZN01 415 aa6.68□□□□□ -1.34
RPL39P39-201ENST00000455840 ZNF579Q8NAF0 562 aaKnown RBP6.68□□□□□ -1.34
RPL39P39-201ENST00000455840 ATF5Q9Y2D1 282 aaPredicted RBP6.66□□□□□ -1.34
RPL39P39-201ENST00000455840 MMRN1Q13201 1228 aa6.65□□□□□ -1.34
RPL39P39-201ENST00000455840 FARP1Q9Y4F1 1045 aaPredicted RBP6.65□□□□□ -1.34
RPL39P39-201ENST00000455840 POTEJP0CG39 1038 aa6.64□□□□□ -1.35
RPL39P39-201ENST00000455840 GALR2O43603 387 aaPredicted RBP6.63□□□□□ -1.35
RPL39P39-201ENST00000455840 PRR29P0C7W0 189 aa6.63□□□□□ -1.35
RPL39P39-201ENST00000455840 PELP1Q8IZL8 1130 aaKnown RBP6.59□□□□□ -1.35
RPL39P39-201ENST00000455840 SPNS2Q8IVW8 549 aa6.58□□□□□ -1.36
RPL39P39-201ENST00000455840 ZRANB1Q9UGI0 708 aa6.57□□□□□ -1.36
RPL39P39-201ENST00000455840 SCUBE2Q9NQ36 999 aa6.56□□□□□ -1.36
RPL39P39-201ENST00000455840 SSUH2Q9Y2M2 353 aa6.56□□□□□ -1.36
RPL39P39-201ENST00000455840 METRNQ9UJH8 293 aa6.55□□□□□ -1.36
RPL39P39-201ENST00000455840 C7P10643 843 aa6.54□□□□□ -1.36
RPL39P39-201ENST00000455840 SLC39A7Q92504 469 aa6.52□□□□□ -1.37
RPL39P39-201ENST00000455840 ZNF692Q9BU19 519 aaPredicted RBP6.51□□□□□ -1.37
RPL39P39-201ENST00000455840 FBLN2P98095 1184 aa6.49□□□□□ -1.37
RPL39P39-201ENST00000455840 ASTLQ6HA08 431 aaPredicted RBP6.46□□□□□ -1.38
RPL39P39-201ENST00000455840 ATMINO43313 823 aaPredicted RBP6.42□□□□□ -1.38
RPL39P39-201ENST00000455840 ST18O60284 1047 aa6.39□□□□□ -1.39
RPL39P39-201ENST00000455840 PHF12Q96QT6 1004 aa6.39□□□□□ -1.39
RPL39P39-201ENST00000455840 PABPN1Q86U42 306 aaKnown RBP eCLIP6.38□□□□□ -1.39
RPL39P39-201ENST00000455840 KCNA4P22459 653 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms