RNA–Protein interactions for RNA: ENST00000455571.5

RUNX1-208, Transcript of runt related transcription factor 1, humanhuman

TSL 3

Gene RUNX1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-208ENST00000455571 NISCHQ9Y2I1 1504 aa44.6■■■■■ 4.73
RUNX1-208ENST00000455571 CCDC180Q9P1Z9 1646 aa39.8■■■■□ 3.96
RUNX1-208ENST00000455571 ABCC9O60706 1549 aa38.93■■■■□ 3.82
RUNX1-208ENST00000455571 RB1CC1Q8TDY2 1594 aa37.46■■■■□ 3.59
RUNX1-208ENST00000455571 NACADO15069 1562 aa37.36■■■■□ 3.57
RUNX1-208ENST00000455571 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
RUNX1-208ENST00000455571 ZCCHC6Q5VYS8 1495 aaKnown RBP37.16■■■■□ 3.54
RUNX1-208ENST00000455571 MYO15BQ96JP2 1530 aa37.06■■■■□ 3.52
RUNX1-208ENST00000455571 DCAF1Q9Y4B6 1507 aa36.9■■■■□ 3.5
RUNX1-208ENST00000455571 UNC13AQ9UPW8 1703 aa36.71■■■■□ 3.47
RUNX1-208ENST00000455571 SCRIBQ14160 1630 aa36.3■■■■□ 3.4
RUNX1-208ENST00000455571 BICRAQ9NZM4 1560 aa36.29■■■■□ 3.4
RUNX1-208ENST00000455571 PABPN1Q86U42 306 aaKnown RBP eCLIP36.28■■■■□ 3.4
RUNX1-208ENST00000455571 SHROOM4Q9ULL8 1493 aa35.91■■■■□ 3.34
RUNX1-208ENST00000455571 DNAJC5BQ9UF47 199 aa35.65■■■■□ 3.3
RUNX1-208ENST00000455571 EIF4G1Q04637 1599 aaKnown RBP35.36■■■■□ 3.25
RUNX1-208ENST00000455571 CC2D2AQ9P2K1 1620 aa35.24■■■■□ 3.23
RUNX1-208ENST00000455571 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
RUNX1-208ENST00000455571 SMARCA4P51532 1647 aa34.69■■■■□ 3.14
RUNX1-208ENST00000455571 BAZ1AQ9NRL2 1556 aaPredicted RBP34.62■■■■□ 3.13
RUNX1-208ENST00000455571 SMARCA2P51531 1590 aa34.45■■■■□ 3.11
RUNX1-208ENST00000455571 ATAD2BQ9ULI0 1458 aa34.44■■■■□ 3.1
RUNX1-208ENST00000455571 NCAPD3P42695 1498 aa34.39■■■■□ 3.1
RUNX1-208ENST00000455571 MROH2BQ7Z745 1585 aa34.38■■■■□ 3.09
RUNX1-208ENST00000455571 HMGXB3Q12766 1538 aa34.32■■■■□ 3.08
RUNX1-208ENST00000455571 PEG3Q9GZU2 1588 aa34.31■■■■□ 3.08
RUNX1-208ENST00000455571 BAZ1BQ9UIG0 1483 aaKnown RBP34.2■■■■□ 3.07
RUNX1-208ENST00000455571 WIZO95785 1651 aa34.06■■■■□ 3.04
RUNX1-208ENST00000455571 RSF1Q96T23 1441 aaPredicted RBP33.91■■■■□ 3.02
RUNX1-208ENST00000455571 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
RUNX1-208ENST00000455571 NESP48681 1621 aa33.66■■■□□ 2.98
RUNX1-208ENST00000455571 LAMC3Q9Y6N6 1575 aa33.6■■■□□ 2.97
RUNX1-208ENST00000455571 ERCC6Q03468 1493 aa33.6■■■□□ 2.97
RUNX1-208ENST00000455571 CADPSQ9ULU8 1353 aa33.39■■■□□ 2.94
RUNX1-208ENST00000455571 KIF21AQ7Z4S6 1674 aa33.37■■■□□ 2.93
RUNX1-208ENST00000455571 PDS5BQ9NTI5 1447 aa33.32■■■□□ 2.92
RUNX1-208ENST00000455571 THOC2Q8NI27 1593 aaKnown RBP33.24■■■□□ 2.91
RUNX1-208ENST00000455571 CUX2O14529 1486 aa33.24■■■□□ 2.91
RUNX1-208ENST00000455571 CCDC88BA6NC98 1476 aa33.22■■■□□ 2.91
RUNX1-208ENST00000455571 CFTRP13569 1480 aa33.2■■■□□ 2.91
RUNX1-208ENST00000455571 PRDM2Q13029 1718 aa33.16■■■□□ 2.9
RUNX1-208ENST00000455571 FANCD2Q9BXW9 1451 aa33.07■■■□□ 2.88
RUNX1-208ENST00000455571 CEP164Q9UPV0 1460 aa33.07■■■□□ 2.88
RUNX1-208ENST00000455571 MRC2Q9UBG0 1479 aa33.03■■■□□ 2.88
RUNX1-208ENST00000455571 SUPT5HO00267 1087 aaKnown RBP33■■■□□ 2.87
RUNX1-208ENST00000455571 WDR62O43379 1518 aa32.92■■■□□ 2.86
RUNX1-208ENST00000455571 URB2Q14146 1524 aaKnown RBP32.75■■■□□ 2.83
RUNX1-208ENST00000455571 DNMBPQ6XZF7 1577 aa32.54■■■□□ 2.8
RUNX1-208ENST00000455571 TOPBP1Q92547 1522 aa32.54■■■□□ 2.8
RUNX1-208ENST00000455571 ABCC8Q09428 1581 aa32.51■■■□□ 2.79
RUNX1-208ENST00000455571 IFT140Q96RY7 1462 aa32.35■■■□□ 2.77
RUNX1-208ENST00000455571 CUX1P39880 1505 aa32.27■■■□□ 2.76
RUNX1-208ENST00000455571 POLA1P09884 1462 aaPredicted RBP32.25■■■□□ 2.75
RUNX1-208ENST00000455571 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
RUNX1-208ENST00000455571 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
RUNX1-208ENST00000455571 FGD5Q6ZNL6 1462 aa32.18■■■□□ 2.74
RUNX1-208ENST00000455571 DNAJC5Q9H3Z4 198 aa32.18■■■□□ 2.74
RUNX1-208ENST00000455571 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
RUNX1-208ENST00000455571 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
RUNX1-208ENST00000455571 SOGA1O94964 1423 aa32.08■■■□□ 2.73
RUNX1-208ENST00000455571 BIVM-ERCC5R4GMW8 1640 aa32.04■■■□□ 2.72
RUNX1-208ENST00000455571 WRNQ14191 1432 aaPredicted RBP eCLIP32.01■■■□□ 2.72
RUNX1-208ENST00000455571 WDR97A6NE52 1622 aa32.01■■■□□ 2.72
RUNX1-208ENST00000455571 TOP2BQ02880 1626 aa32■■■□□ 2.71
RUNX1-208ENST00000455571 SYNJ1O43426 1573 aa32■■■□□ 2.71
RUNX1-208ENST00000455571 AQRO60306 1485 aaKnown RBP eCLIP31.98■■■□□ 2.712e-6■□□□□ 10.8
RUNX1-208ENST00000455571 TDRD9Q8NDG6 1382 aaKnown RBP31.9■■■□□ 2.7
RUNX1-208ENST00000455571 ABCA10Q8WWZ4 1543 aa31.85■■■□□ 2.69
RUNX1-208ENST00000455571 PBRM1Q86U86 1689 aa31.83■■■□□ 2.69
RUNX1-208ENST00000455571 CHD1O14646 1710 aa31.82■■■□□ 2.68
RUNX1-208ENST00000455571 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
RUNX1-208ENST00000455571 OSCARQ8IYS5 282 aa31.75■■■□□ 2.67
RUNX1-208ENST00000455571 GRIN2BQ13224 1484 aa31.75■■■□□ 2.67
RUNX1-208ENST00000455571 SNAPC4Q5SXM2 1469 aa31.75■■■□□ 2.67
RUNX1-208ENST00000455571 GAPVD1Q14C86 1478 aa31.74■■■□□ 2.67
RUNX1-208ENST00000455571 MAGI1Q96QZ7 1491 aaPredicted RBP31.69■■■□□ 2.66
RUNX1-208ENST00000455571 FBLN2P98095 1184 aa31.62■■■□□ 2.65
RUNX1-208ENST00000455571 SYNJ2O15056 1496 aa31.56■■■□□ 2.64
RUNX1-208ENST00000455571 ADAMTS12P58397 1594 aa31.51■■■□□ 2.63
RUNX1-208ENST00000455571 CHMP7Q8WUX9 453 aaPredicted RBP31.5■■■□□ 2.63
RUNX1-208ENST00000455571 ERICH3Q5RHP9 1530 aa31.49■■■□□ 2.63
RUNX1-208ENST00000455571 RIMBP3CA6NJZ7 1639 aa31.4■■■□□ 2.62
RUNX1-208ENST00000455571 RIMBP3BA6NNM3 1639 aa31.4■■■□□ 2.62
RUNX1-208ENST00000455571 RIMBP3Q9UFD9 1639 aa31.4■■■□□ 2.62
RUNX1-208ENST00000455571 CLASP1Q7Z460 1538 aa31.38■■■□□ 2.61
RUNX1-208ENST00000455571 FHAD1B1AJZ9 1412 aa31.36■■■□□ 2.61
RUNX1-208ENST00000455571 GRIN2AQ12879 1464 aa31.35■■■□□ 2.61
RUNX1-208ENST00000455571 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
RUNX1-208ENST00000455571 KIF27Q86VH2 1401 aa31.34■■■□□ 2.61
RUNX1-208ENST00000455571 CUL7Q14999 1698 aa31.26■■■□□ 2.6
RUNX1-208ENST00000455571 CEP170Q5SW79 1584 aa31.23■■■□□ 2.59
RUNX1-208ENST00000455571 NUP160Q12769 1436 aa31.19■■■□□ 2.58
RUNX1-208ENST00000455571 TRIM41Q8WV44 630 aa31.18■■■□□ 2.58
RUNX1-208ENST00000455571 IGF1RP08069 1367 aa31.16■■■□□ 2.58
RUNX1-208ENST00000455571 ARAP1Q96P48 1450 aa31.08■■■□□ 2.57
RUNX1-208ENST00000455571 RUSC2Q8N2Y8 1516 aa31.05■■■□□ 2.56
RUNX1-208ENST00000455571 SHROOM2Q13796 1616 aa31.03■■■□□ 2.56
RUNX1-208ENST00000455571 CARMIL1Q5VZK9 1371 aa31.01■■■□□ 2.55
RUNX1-208ENST00000455571 CYB5RLQ6IPT4 315 aa30.96■■■□□ 2.55
RUNX1-208ENST00000455571 ERCC6L2Q5T890 1561 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms