RNA–Protein interactions for RNA: ENST00000454905.5

SIK3-206, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 294 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-206ENST00000454905 NISCHQ9Y2I1 1504 aa18.22■□□□□ 0.51
SIK3-206ENST00000454905 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
SIK3-206ENST00000454905 ABCC9O60706 1549 aa16.09■□□□□ 0.17
SIK3-206ENST00000454905 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
SIK3-206ENST00000454905 NACADO15069 1562 aa15.41■□□□□ 0.06
SIK3-206ENST00000454905 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
SIK3-206ENST00000454905 DCAF1Q9Y4B6 1507 aa15.15■□□□□ 0.02
SIK3-206ENST00000454905 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
SIK3-206ENST00000454905 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
SIK3-206ENST00000454905 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
SIK3-206ENST00000454905 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
SIK3-206ENST00000454905 BICRAQ9NZM4 1560 aa14.99□□□□□ -0.01
SIK3-206ENST00000454905 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
SIK3-206ENST00000454905 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
SIK3-206ENST00000454905 SCRIBQ14160 1630 aa14.74□□□□□ -0.05
SIK3-206ENST00000454905 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
SIK3-206ENST00000454905 CC2D2AQ9P2K1 1620 aa14.58□□□□□ -0.08
SIK3-206ENST00000454905 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
SIK3-206ENST00000454905 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
SIK3-206ENST00000454905 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
SIK3-206ENST00000454905 SMARCA4P51532 1647 aa14.15□□□□□ -0.14
SIK3-206ENST00000454905 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
SIK3-206ENST00000454905 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
SIK3-206ENST00000454905 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
SIK3-206ENST00000454905 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
SIK3-206ENST00000454905 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
SIK3-206ENST00000454905 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
SIK3-206ENST00000454905 CUX2O14529 1486 aa13.94□□□□□ -0.18
SIK3-206ENST00000454905 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
SIK3-206ENST00000454905 LAMC3Q9Y6N6 1575 aa13.87□□□□□ -0.19
SIK3-206ENST00000454905 NESP48681 1621 aa13.86□□□□□ -0.19
SIK3-206ENST00000454905 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
SIK3-206ENST00000454905 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
SIK3-206ENST00000454905 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
SIK3-206ENST00000454905 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
SIK3-206ENST00000454905 WIZO95785 1651 aa13.78□□□□□ -0.2
SIK3-206ENST00000454905 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
SIK3-206ENST00000454905 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
SIK3-206ENST00000454905 CFTRP13569 1480 aa13.67□□□□□ -0.22
SIK3-206ENST00000454905 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
SIK3-206ENST00000454905 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
SIK3-206ENST00000454905 WDR62O43379 1518 aa13.63□□□□□ -0.23
SIK3-206ENST00000454905 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
SIK3-206ENST00000454905 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
SIK3-206ENST00000454905 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.25
SIK3-206ENST00000454905 URB2Q14146 1524 aaKnown RBP13.47□□□□□ -0.25
SIK3-206ENST00000454905 PRDM2Q13029 1718 aa13.44□□□□□ -0.26
SIK3-206ENST00000454905 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
SIK3-206ENST00000454905 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
SIK3-206ENST00000454905 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
SIK3-206ENST00000454905 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
SIK3-206ENST00000454905 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
SIK3-206ENST00000454905 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
SIK3-206ENST00000454905 TARBP1Q13395 1621 aaKnown RBP13.23□□□□□ -0.29
SIK3-206ENST00000454905 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
SIK3-206ENST00000454905 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
SIK3-206ENST00000454905 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
SIK3-206ENST00000454905 SOGA1O94964 1423 aa13.15□□□□□ -0.3
SIK3-206ENST00000454905 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.3
SIK3-206ENST00000454905 CUX1P39880 1505 aa13.14□□□□□ -0.31
SIK3-206ENST00000454905 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
SIK3-206ENST00000454905 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
SIK3-206ENST00000454905 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
SIK3-206ENST00000454905 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
SIK3-206ENST00000454905 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
SIK3-206ENST00000454905 MAGI1Q96QZ7 1491 aaPredicted RBP13.06□□□□□ -0.32
SIK3-206ENST00000454905 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
SIK3-206ENST00000454905 ARHGEF11O15085 1522 aa13.05□□□□□ -0.32
SIK3-206ENST00000454905 ABCA10Q8WWZ4 1543 aa13.04□□□□□ -0.32
SIK3-206ENST00000454905 RIMBP3CA6NJZ7 1639 aa13.04□□□□□ -0.32
SIK3-206ENST00000454905 RIMBP3BA6NNM3 1639 aa13.04□□□□□ -0.32
SIK3-206ENST00000454905 RIMBP3Q9UFD9 1639 aa13.04□□□□□ -0.32
SIK3-206ENST00000454905 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
SIK3-206ENST00000454905 CHD1O14646 1710 aa13.02□□□□□ -0.33
SIK3-206ENST00000454905 SYNJ2O15056 1496 aa13□□□□□ -0.33
SIK3-206ENST00000454905 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
SIK3-206ENST00000454905 WRNQ14191 1432 aaPredicted RBP eCLIP12.99□□□□□ -0.33
SIK3-206ENST00000454905 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
SIK3-206ENST00000454905 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
SIK3-206ENST00000454905 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
SIK3-206ENST00000454905 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
SIK3-206ENST00000454905 FBLN2P98095 1184 aa12.96□□□□□ -0.33
SIK3-206ENST00000454905 CHMP7Q8WUX9 453 aaPredicted RBP12.96□□□□□ -0.33
SIK3-206ENST00000454905 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
SIK3-206ENST00000454905 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
SIK3-206ENST00000454905 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
SIK3-206ENST00000454905 CYB5RLQ6IPT4 315 aa12.89□□□□□ -0.35
SIK3-206ENST00000454905 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
SIK3-206ENST00000454905 GRIN2AQ12879 1464 aa12.88□□□□□ -0.35
SIK3-206ENST00000454905 NUP160Q12769 1436 aa12.88□□□□□ -0.35
SIK3-206ENST00000454905 FHAD1B1AJZ9 1412 aa12.87□□□□□ -0.35
SIK3-206ENST00000454905 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
SIK3-206ENST00000454905 CEP170Q5SW79 1584 aa12.79□□□□□ -0.36
SIK3-206ENST00000454905 SHROOM2Q13796 1616 aa12.77□□□□□ -0.36
SIK3-206ENST00000454905 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
SIK3-206ENST00000454905 IGF1RP08069 1367 aa12.74□□□□□ -0.37
SIK3-206ENST00000454905 ERCC6L2Q5T890 1561 aa12.71□□□□□ -0.37
SIK3-206ENST00000454905 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
SIK3-206ENST00000454905 RUSC2Q8N2Y8 1516 aa12.68□□□□□ -0.38
SIK3-206ENST00000454905 CUL7Q14999 1698 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms